RNA–Protein interactions for RNA: ENST00000560615.5

TPM1-224, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-224ENST00000560615 CHMP4BQ9H444 224 aaKnown RBP22.55■■□□□ 1.2
TPM1-224ENST00000560615 CENPFP49454 3210 aa22.54■■□□□ 1.2
TPM1-224ENST00000560615 H0YGN5 161 aa22.54■■□□□ 1.2
TPM1-224ENST00000560615 CCAR1Q8IX12 1150 aaKnown RBP22.54■■□□□ 1.2
TPM1-224ENST00000560615 MAGEB6Q8N7X4 407 aa22.54■■□□□ 1.2
TPM1-224ENST00000560615 TLR7Q9NYK1 1049 aaKnown RBP22.54■■□□□ 1.2
TPM1-224ENST00000560615 SAP30BPQ9UHR5 308 aaKnown RBP22.54■■□□□ 1.2
TPM1-224ENST00000560615 HMMRO75330 724 aa22.53■■□□□ 1.2
TPM1-224ENST00000560615 DYNLL1P63167 89 aaKnown RBP22.53■■□□□ 1.2
TPM1-224ENST00000560615 MORF4L1Q9UBU8 362 aa22.53■■□□□ 1.2
TPM1-224ENST00000560615 ZBTB21Q9ULJ3 1066 aa22.53■■□□□ 1.2
TPM1-224ENST00000560615 COLQQ9Y215 455 aaPredicted RBP22.53■■□□□ 1.2
TPM1-224ENST00000560615 EXOC6BQ9Y2D4 811 aa22.53■■□□□ 1.2
TPM1-224ENST00000560615 GDF11O95390 407 aa22.52■■□□□ 1.2
TPM1-224ENST00000560615 HMGCRP04035 888 aa22.52■■□□□ 1.2
TPM1-224ENST00000560615 USP17L2Q6R6M4 530 aa22.52■■□□□ 1.2
TPM1-224ENST00000560615 CLASRPQ8N2M8 674 aaKnown RBP22.52■■□□□ 1.2
TPM1-224ENST00000560615 MIGA1Q8NAN2 632 aa22.52■■□□□ 1.2
TPM1-224ENST00000560615 GPRC5AQ8NFJ5 357 aa22.52■■□□□ 1.2
TPM1-224ENST00000560615 DEFB118Q96PH6 123 aa22.52■■□□□ 1.2
TPM1-224ENST00000560615 SERPINB13Q9UIV8 391 aa22.52■■□□□ 1.2
TPM1-224ENST00000560615 MAST2Q6P0Q8 1798 aa22.51■■□□□ 1.19
TPM1-224ENST00000560615 RPAP2Q8IXW5 612 aaPredicted RBP22.51■■□□□ 1.19
TPM1-224ENST00000560615 EHD4Q9H223 541 aa22.51■■□□□ 1.19
TPM1-224ENST00000560615 DNAJC18Q9H819 358 aa22.51■■□□□ 1.19
TPM1-224ENST00000560615 CABP5Q9NP86 173 aa22.51■■□□□ 1.19
TPM1-224ENST00000560615 PHIPQ8WWQ0 1821 aa22.5■■□□□ 1.19
TPM1-224ENST00000560615 USP14P54578 494 aa22.5■■□□□ 1.19
TPM1-224ENST00000560615 HERVK_113P62684 666 aa22.5■■□□□ 1.19
TPM1-224ENST00000560615 PDE3AQ14432 1141 aa22.5■■□□□ 1.19
TPM1-224ENST00000560615 UBE2Q1Q7Z7E8 422 aa22.5■■□□□ 1.19
TPM1-224ENST00000560615 SOCS4Q8WXH5 440 aa22.5■■□□□ 1.19
TPM1-224ENST00000560615 KIF1BPQ96EK5 621 aa22.5■■□□□ 1.19
TPM1-224ENST00000560615 FEZ1Q99689 392 aa22.5■■□□□ 1.19
TPM1-224ENST00000560615 PAK6Q9NQU5 681 aaPredicted RBP22.5■■□□□ 1.19
TPM1-224ENST00000560615 DDX19BQ9UMR2 479 aa22.5■■□□□ 1.19
TPM1-224ENST00000560615 MAPK4P31152 587 aa22.49■■□□□ 1.19
TPM1-224ENST00000560615 TRMT44Q8IYL2 757 aaKnown RBP22.49■■□□□ 1.19
TPM1-224ENST00000560615 RHPN1Q8TCX5 695 aa22.49■■□□□ 1.19
TPM1-224ENST00000560615 PANK1Q8TE04 598 aa22.49■■□□□ 1.19
TPM1-224ENST00000560615 P2RX7Q99572 595 aaKnown RBP22.49■■□□□ 1.19
TPM1-224ENST00000560615 NUDT12Q9BQG2 462 aa22.49■■□□□ 1.19
TPM1-224ENST00000560615 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.49■■□□□ 1.19
TPM1-224ENST00000560615 CWC22Q9HCG8 908 aaKnown RBP22.49■■□□□ 1.19
TPM1-224ENST00000560615 HMX1Q9NP08 348 aaPredicted RBP22.49■■□□□ 1.19
TPM1-224ENST00000560615 EVI5O60447 810 aa22.48■■□□□ 1.19
TPM1-224ENST00000560615 GH2P01242 217 aa22.48■■□□□ 1.19
TPM1-224ENST00000560615 IFIT2P09913 472 aaKnown RBP22.48■■□□□ 1.19
TPM1-224ENST00000560615 TATDN1Q6P1N9 297 aa22.48■■□□□ 1.19
TPM1-224ENST00000560615 ANKLE1Q8NAG6 615 aa22.48■■□□□ 1.19
TPM1-224ENST00000560615 PTPRFP10586 1907 aa22.48■■□□□ 1.19
TPM1-224ENST00000560615 MKI67P46013 3256 aaKnown RBP22.48■■□□□ 1.19
TPM1-224ENST00000560615 RPTORQ8N122 1335 aa22.48■■□□□ 1.19
TPM1-224ENST00000560615 MGAMO43451 1857 aa22.47■■□□□ 1.19
TPM1-224ENST00000560615 MAGEB6P1A0A0J9YX57 407 aa22.47■■□□□ 1.19
TPM1-224ENST00000560615 POLR3DP05423 398 aaPredicted RBP22.47■■□□□ 1.19
TPM1-224ENST00000560615 CERKLQ49MI3 558 aaPredicted RBP22.47■■□□□ 1.19
TPM1-224ENST00000560615 CHRDL2Q6WN34 429 aa22.47■■□□□ 1.19
TPM1-224ENST00000560615 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.47■■□□□ 1.19
TPM1-224ENST00000560615 CRNKL1Q9BZJ0 848 aaKnown RBP22.47■■□□□ 1.19
TPM1-224ENST00000560615 CRISPLD2Q9H0B8 497 aa22.47■■□□□ 1.19
TPM1-224ENST00000560615 ANTXR1Q9H6X2 564 aa22.47■■□□□ 1.19
TPM1-224ENST00000560615 IL1RAPL2Q9NP60 686 aa22.47■■□□□ 1.19
TPM1-224ENST00000560615 GJD2Q9UKL4 321 aa22.47■■□□□ 1.19
TPM1-224ENST00000560615 LOC285556D6RIA3 1793 aa22.46■■□□□ 1.19
TPM1-224ENST00000560615 RAB11FIP3O75154 756 aa22.46■■□□□ 1.19
TPM1-224ENST00000560615 GLRX3O76003 335 aaKnown RBP22.46■■□□□ 1.19
TPM1-224ENST00000560615 FXR1P51114 621 aaKnown RBP eCLIP22.46■■□□□ 1.19
TPM1-224ENST00000560615 CCNA1P78396 465 aa22.46■■□□□ 1.19
TPM1-224ENST00000560615 RAB3GAP1Q15042 981 aa22.46■■□□□ 1.19
TPM1-224ENST00000560615 ABCB5Q2M3G0 1257 aa22.46■■□□□ 1.19
TPM1-224ENST00000560615 NECAB2Q7Z6G3 386 aa22.46■■□□□ 1.19
TPM1-224ENST00000560615 USP17L15C9J2P7 530 aa22.45■■□□□ 1.18
TPM1-224ENST00000560615 USP17L13C9JLJ4 530 aa22.45■■□□□ 1.18
TPM1-224ENST00000560615 USP17L11C9JVI0 530 aa22.45■■□□□ 1.18
TPM1-224ENST00000560615 USP17L18D6R9N7 530 aa22.45■■□□□ 1.18
TPM1-224ENST00000560615 USP17L22D6RA61 530 aa22.45■■□□□ 1.18
TPM1-224ENST00000560615 USP17L17D6RBQ6 530 aa22.45■■□□□ 1.18
TPM1-224ENST00000560615 USP17L19D6RCP7 530 aa22.45■■□□□ 1.18
TPM1-224ENST00000560615 USP17L20D6RJB6 530 aa22.45■■□□□ 1.18
TPM1-224ENST00000560615 XRCC5P13010 732 aaKnown RBP22.45■■□□□ 1.18
TPM1-224ENST00000560615 JAG1P78504 1218 aa22.45■■□□□ 1.18
TPM1-224ENST00000560615 USP17L24Q0WX57 530 aa22.45■■□□□ 1.18
TPM1-224ENST00000560615 SLC9C2Q5TAH2 1124 aa22.45■■□□□ 1.18
TPM1-224ENST00000560615 C12orf42Q96LP6 360 aa22.45■■□□□ 1.18
TPM1-224ENST00000560615 EMILIN3Q9NT22 766 aa22.45■■□□□ 1.18
TPM1-224ENST00000560615 NDUFB9Q9Y6M9 179 aa22.45■■□□□ 1.18
TPM1-224ENST00000560615 BRCA2P51587 3418 aa22.45■■□□□ 1.18
TPM1-224ENST00000560615 CYP2B6P20813 491 aa22.44■■□□□ 1.18
TPM1-224ENST00000560615 ERVK-9P63128 1117 aa22.44■■□□□ 1.18
TPM1-224ENST00000560615 ERVK-24P63145 666 aa22.44■■□□□ 1.18
TPM1-224ENST00000560615 PAGR1Q9BTK6 254 aa22.44■■□□□ 1.18
TPM1-224ENST00000560615 RBPJLQ9UBG7 517 aa22.44■■□□□ 1.18
TPM1-224ENST00000560615 RGS2P41220 211 aa22.43■■□□□ 1.18
TPM1-224ENST00000560615 KIAA1683Q9H0B3 1180 aa22.43■■□□□ 1.18
TPM1-224ENST00000560615 RABGAP1Q9Y3P9 1069 aa22.43■■□□□ 1.18
TPM1-224ENST00000560615 ATAD5Q96QE3 1844 aa22.43■■□□□ 1.18
TPM1-224ENST00000560615 APBB1O00213 710 aa22.42■■□□□ 1.18
TPM1-224ENST00000560615 ZKSCAN1P17029 563 aaPredicted RBP22.42■■□□□ 1.18
TPM1-224ENST00000560615 ZYXQ15942 572 aaKnown RBP22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms