RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 MPZL3Q6UWV2 235 aa6.57□□□□□ -1.36
LRRC28-218ENST00000560236 C22orf34Q6ZV56 151 aa6.57□□□□□ -1.36
LRRC28-218ENST00000560236 SV2BQ7L1I2 683 aa6.57□□□□□ -1.36
LRRC28-218ENST00000560236 NPAS4Q8IUM7 802 aa6.57□□□□□ -1.36
LRRC28-218ENST00000560236 MFSD2AQ8NA29 543 aa6.57□□□□□ -1.36
LRRC28-218ENST00000560236 SEMA3GQ9NS98 782 aa6.57□□□□□ -1.36
LRRC28-218ENST00000560236 TTF2Q9UNY4 1162 aaKnown RBP6.57□□□□□ -1.36
LRRC28-218ENST00000560236 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.56□□□□□ -1.36
LRRC28-218ENST00000560236 H3BS24 57 aa6.56□□□□□ -1.36
LRRC28-218ENST00000560236 CAP2P40123 477 aa6.56□□□□□ -1.36
LRRC28-218ENST00000560236 RAP1GAPP47736 663 aa6.56□□□□□ -1.36
LRRC28-218ENST00000560236 TMEM67Q5HYA8 995 aa6.56□□□□□ -1.36
LRRC28-218ENST00000560236 WIPI1Q5MNZ9 446 aaPredicted RBP6.56□□□□□ -1.36
LRRC28-218ENST00000560236 ZNF746Q6NUN9 644 aaPredicted RBP6.56□□□□□ -1.36
LRRC28-218ENST00000560236 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.56□□□□□ -1.36
LRRC28-218ENST00000560236 HID1Q8IV36 788 aa6.56□□□□□ -1.36
LRRC28-218ENST00000560236 GAL3ST3Q96A11 431 aa6.56□□□□□ -1.36
LRRC28-218ENST00000560236 SNCAIPQ9Y6H5 919 aa6.56□□□□□ -1.36
LRRC28-218ENST00000560236 CAPN6Q9Y6Q1 641 aa6.56□□□□□ -1.36
LRRC28-218ENST00000560236 CBX7O95931 251 aa6.55□□□□□ -1.36
LRRC28-218ENST00000560236 GDNFP39905 211 aa6.55□□□□□ -1.36
LRRC28-218ENST00000560236 TTBK2Q6IQ55 1244 aa6.55□□□□□ -1.36
LRRC28-218ENST00000560236 LETMD1Q6P1Q0 360 aa6.55□□□□□ -1.36
LRRC28-218ENST00000560236 RIN3Q8TB24 985 aa6.55□□□□□ -1.36
LRRC28-218ENST00000560236 PPP1R16BQ96T49 567 aa6.55□□□□□ -1.36
LRRC28-218ENST00000560236 LCE4AQ5TA78 99 aa6.54□□□□□ -1.36
LRRC28-218ENST00000560236 PRAMEF13Q5VWM6 474 aa6.54□□□□□ -1.36
LRRC28-218ENST00000560236 PRR23BQ6ZRT6 265 aa6.54□□□□□ -1.36
LRRC28-218ENST00000560236 THAP5Q7Z6K1 395 aa6.54□□□□□ -1.36
LRRC28-218ENST00000560236 CCDC120Q96HB5 630 aa6.54□□□□□ -1.36
LRRC28-218ENST00000560236 TOX2Q96NM4 488 aa6.54□□□□□ -1.36
LRRC28-218ENST00000560236 C19orf73Q9NVV2 129 aa6.54□□□□□ -1.36
LRRC28-218ENST00000560236 ST14Q9Y5Y6 855 aa6.54□□□□□ -1.36
LRRC28-218ENST00000560236 TSPAN15O95858 294 aa6.53□□□□□ -1.36
LRRC28-218ENST00000560236 CST3P01034 146 aaPredicted RBP6.53□□□□□ -1.36
LRRC28-218ENST00000560236 LDHBP07195 334 aaKnown RBP6.53□□□□□ -1.36
LRRC28-218ENST00000560236 P4HBP07237 508 aaKnown RBP6.53□□□□□ -1.36
LRRC28-218ENST00000560236 LMNB1P20700 586 aa6.53□□□□□ -1.36
LRRC28-218ENST00000560236 GRK4P32298 578 aa6.53□□□□□ -1.36
LRRC28-218ENST00000560236 CDK8P49336 464 aa6.53□□□□□ -1.36
LRRC28-218ENST00000560236 KRTAP19-4Q3LI73 84 aa6.53□□□□□ -1.36
LRRC28-218ENST00000560236 SYDE1Q6ZW31 735 aaPredicted RBP6.53□□□□□ -1.36
LRRC28-218ENST00000560236 ERICH6Q7L0X2 663 aa6.53□□□□□ -1.36
LRRC28-218ENST00000560236 XAGE3Q8WTP9 111 aa6.53□□□□□ -1.36
LRRC28-218ENST00000560236 UBE2FQ969M7 185 aa6.53□□□□□ -1.36
LRRC28-218ENST00000560236 FRMD6Q96NE9 622 aa6.53□□□□□ -1.36
LRRC28-218ENST00000560236 IVNS1ABPQ9Y6Y0 642 aa6.53□□□□□ -1.36
LRRC28-218ENST00000560236 CYP7A1P22680 504 aa6.52□□□□□ -1.37
LRRC28-218ENST00000560236 CILP2Q8IUL8 1156 aa6.52□□□□□ -1.37
LRRC28-218ENST00000560236 COX4I2Q96KJ9 171 aa6.52□□□□□ -1.37
LRRC28-218ENST00000560236 ALPK1Q96QP1 1244 aa6.52□□□□□ -1.37
LRRC28-218ENST00000560236 ZSWIM5Q9P217 1185 aa6.52□□□□□ -1.37
LRRC28-218ENST00000560236 UNC13AQ9UPW8 1703 aa6.51□□□□□ -1.37
LRRC28-218ENST00000560236 EIF4BP23588 611 aaKnown RBP6.51□□□□□ -1.37
LRRC28-218ENST00000560236 KIR3DL1P43629 444 aa6.51□□□□□ -1.37
LRRC28-218ENST00000560236 RPS26P62854 115 aaKnown RBP6.51□□□□□ -1.37
LRRC28-218ENST00000560236 SEPT6Q14141 434 aa6.51□□□□□ -1.37
LRRC28-218ENST00000560236 CCDC85BQ15834 202 aaPredicted RBP6.51□□□□□ -1.37
LRRC28-218ENST00000560236 ANKLE2Q86XL3 938 aa6.51□□□□□ -1.37
LRRC28-218ENST00000560236 SLAMF8Q9P0V8 285 aa6.51□□□□□ -1.37
LRRC28-218ENST00000560236 RAC2P15153 192 aa6.5□□□□□ -1.37
LRRC28-218ENST00000560236 CFPP27918 469 aa6.5□□□□□ -1.37
LRRC28-218ENST00000560236 GNA15P30679 374 aa6.5□□□□□ -1.37
LRRC28-218ENST00000560236 TNK2Q07912 1038 aa6.5□□□□□ -1.37
LRRC28-218ENST00000560236 TTC6Q86TZ1 520 aa6.5□□□□□ -1.37
LRRC28-218ENST00000560236 CDH24Q86UP0 819 aa6.5□□□□□ -1.37
LRRC28-218ENST00000560236 ZSCAN18Q8TBC5 510 aaPredicted RBP6.5□□□□□ -1.37
LRRC28-218ENST00000560236 DIRC2Q96SL1 478 aa6.5□□□□□ -1.37
LRRC28-218ENST00000560236 KRTAP4-9Q9BYQ8 210 aa6.5□□□□□ -1.37
LRRC28-218ENST00000560236 NSUN3Q9H649 340 aaKnown RBP6.5□□□□□ -1.37
LRRC28-218ENST00000560236 PCDHB5Q9Y5E4 795 aa6.5□□□□□ -1.37
LRRC28-218ENST00000560236 TACC3Q9Y6A5 838 aa6.5□□□□□ -1.37
LRRC28-218ENST00000560236 GFRA2O00451 464 aa6.49□□□□□ -1.37
LRRC28-218ENST00000560236 NFIBO00712 420 aa6.49□□□□□ -1.37
LRRC28-218ENST00000560236 KCNA1Q09470 495 aa6.49□□□□□ -1.37
LRRC28-218ENST00000560236 LRRC56Q8IYG6 542 aaPredicted RBP6.49□□□□□ -1.37
LRRC28-218ENST00000560236 FBXO15Q8NCQ5 510 aaPredicted RBP6.49□□□□□ -1.37
LRRC28-218ENST00000560236 ABHD4Q8TB40 342 aa6.49□□□□□ -1.37
LRRC28-218ENST00000560236 DPH2Q9BQC3 489 aaPredicted RBP6.49□□□□□ -1.37
LRRC28-218ENST00000560236 PGRP06401 933 aa6.48□□□□□ -1.37
LRRC28-218ENST00000560236 MAP3K11Q16584 847 aa6.48□□□□□ -1.37
LRRC28-218ENST00000560236 TMPRSS7Q7RTY8 843 aa6.48□□□□□ -1.37
LRRC28-218ENST00000560236 MRPL41Q8IXM3 137 aaKnown RBP6.48□□□□□ -1.37
LRRC28-218ENST00000560236 PIWIL2Q8TC59 973 aaKnown RBP6.48□□□□□ -1.37
LRRC28-218ENST00000560236 TJP2Q9UDY2 1190 aa6.48□□□□□ -1.37
LRRC28-218ENST00000560236 DNAJC25-GNG10A0A024R161 153 aa6.47□□□□□ -1.37
LRRC28-218ENST00000560236 RBAK-RBAKDNI3L0D1 243 aa6.47□□□□□ -1.37
LRRC28-218ENST00000560236 PRPF40AO75400 957 aaKnown RBP6.47□□□□□ -1.37
LRRC28-218ENST00000560236 C1QTNF9P0C862 333 aa6.47□□□□□ -1.37
LRRC28-218ENST00000560236 ETV3P41162 512 aa6.47□□□□□ -1.37
LRRC28-218ENST00000560236 SLC6A19Q695T7 634 aa6.47□□□□□ -1.37
LRRC28-218ENST00000560236 AGMOQ6ZNB7 445 aa6.47□□□□□ -1.37
LRRC28-218ENST00000560236 C1QL4Q86Z23 238 aa6.47□□□□□ -1.37
LRRC28-218ENST00000560236 TMEM87BQ96K49 555 aa6.47□□□□□ -1.37
LRRC28-218ENST00000560236 MIR1-1HGQ9H1L0 117 aa6.47□□□□□ -1.37
LRRC28-218ENST00000560236 DCP1AQ9NPI6 582 aaPredicted RBP6.47□□□□□ -1.37
LRRC28-218ENST00000560236 NACADO15069 1562 aa6.47□□□□□ -1.37
LRRC28-218ENST00000560236 ESR1P03372 595 aa6.46□□□□□ -1.38
LRRC28-218ENST00000560236 LIG3P49916 1009 aa6.46□□□□□ -1.38
LRRC28-218ENST00000560236 HK2P52789 917 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms