RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 DEFB118Q96PH6 123 aa16.06■□□□□ 0.16
TPM1-220ENST00000559556 CRISPLD2Q9H0B8 497 aa16.06■□□□□ 0.16
TPM1-220ENST00000559556 RBM27Q9P2N5 1060 aaKnown RBP16.06■□□□□ 0.16
TPM1-220ENST00000559556 MORF4L1Q9UBU8 362 aa16.06■□□□□ 0.16
TPM1-220ENST00000559556 HMGCRP04035 888 aa16.05■□□□□ 0.16
TPM1-220ENST00000559556 BACE1P56817 501 aa16.05■□□□□ 0.16
TPM1-220ENST00000559556 ATP8B2P98198 1209 aa16.05■□□□□ 0.16
TPM1-220ENST00000559556 OS9Q13438 667 aaPredicted RBP16.05■□□□□ 0.16
TPM1-220ENST00000559556 MTMR2Q13614 643 aa16.05■□□□□ 0.16
TPM1-220ENST00000559556 TGFBRAP1Q8WUH2 860 aa16.05■□□□□ 0.16
TPM1-220ENST00000559556 GINM1Q9NU53 330 aa16.05■□□□□ 0.16
TPM1-220ENST00000559556 TAOK2Q9UL54 1235 aa16.05■□□□□ 0.16
TPM1-220ENST00000559556 NR2E3Q9Y5X4 410 aa16.05■□□□□ 0.16
TPM1-220ENST00000559556 LTBP2Q14767 1821 aa16.04■□□□□ 0.16
TPM1-220ENST00000559556 ZBTB7BO15156 539 aaPredicted RBP16.04■□□□□ 0.16
TPM1-220ENST00000559556 HOXA7P31268 230 aaPredicted RBP16.04■□□□□ 0.16
TPM1-220ENST00000559556 MAPKAPK5Q8IW41 473 aa16.04■□□□□ 0.16
TPM1-220ENST00000559556 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.04■□□□□ 0.16
TPM1-220ENST00000559556 DBNLQ9UJU6 430 aaKnown RBP16.04■□□□□ 0.16
TPM1-220ENST00000559556 GJD2Q9UKL4 321 aa16.04■□□□□ 0.16
TPM1-220ENST00000559556 NOP58Q9Y2X3 529 aaKnown RBP16.04■□□□□ 0.16
TPM1-220ENST00000559556 UNC80Q8N2C7 3258 aa16.03■□□□□ 0.16
TPM1-220ENST00000559556 SURF6O75683 361 aaKnown RBP16.03■□□□□ 0.16
TPM1-220ENST00000559556 TFRCP02786 760 aaKnown RBP16.03■□□□□ 0.16
TPM1-220ENST00000559556 ZAP70P43403 619 aa16.03■□□□□ 0.16
TPM1-220ENST00000559556 IRX3P78415 501 aaPredicted RBP16.03■□□□□ 0.16
TPM1-220ENST00000559556 JAG1P78504 1218 aa16.03■□□□□ 0.16
TPM1-220ENST00000559556 FOXP4Q8IVH2 680 aaPredicted RBP16.03■□□□□ 0.16
TPM1-220ENST00000559556 C1orf115Q9H7X2 142 aa16.03■□□□□ 0.16
TPM1-220ENST00000559556 PALD1Q9ULE6 856 aa16.03■□□□□ 0.16
TPM1-220ENST00000559556 ZBTB21Q9ULJ3 1066 aa16.03■□□□□ 0.16
TPM1-220ENST00000559556 C19orf81C9J6K1 198 aa16.02■□□□□ 0.16
TPM1-220ENST00000559556 SHROOM1Q2M3G4 852 aaPredicted RBP16.02■□□□□ 0.16
TPM1-220ENST00000559556 FTSJ3Q8IY81 847 aaKnown RBP16.02■□□□□ 0.16
TPM1-220ENST00000559556 CRACR2BQ8N4Y2 399 aaPredicted RBP16.02■□□□□ 0.16
TPM1-220ENST00000559556 ANKLE1Q8NAG6 615 aa16.02■□□□□ 0.16
TPM1-220ENST00000559556 PIH1D3Q9NQM4 214 aaKnown RBP16.02■□□□□ 0.16
TPM1-220ENST00000559556 TLR7Q9NYK1 1049 aaKnown RBP16.02■□□□□ 0.16
TPM1-220ENST00000559556 TMOD4Q9NZQ9 345 aa16.02■□□□□ 0.16
TPM1-220ENST00000559556 MCM3APO60318 1980 aa16.02■□□□□ 0.15
TPM1-220ENST00000559556 GREB1LQ9C091 1923 aaPredicted RBP16.02■□□□□ 0.15
TPM1-220ENST00000559556 RPTORQ8N122 1335 aa16.01■□□□□ 0.15
TPM1-220ENST00000559556 A0A1W2PPC1 479 aa16.01■□□□□ 0.15
TPM1-220ENST00000559556 USP17L10C9JJH3 530 aa16.01■□□□□ 0.15
TPM1-220ENST00000559556 EVI5O60447 810 aa16.01■□□□□ 0.15
TPM1-220ENST00000559556 GDF11O95390 407 aa16.01■□□□□ 0.15
TPM1-220ENST00000559556 RLBP1P12271 317 aa16.01■□□□□ 0.15
TPM1-220ENST00000559556 HERVK_113P62684 666 aa16.01■□□□□ 0.15
TPM1-220ENST00000559556 CERS3Q8IU89 383 aa16.01■□□□□ 0.15
TPM1-220ENST00000559556 PAWRQ96IZ0 340 aaKnown RBP16.01■□□□□ 0.15
TPM1-220ENST00000559556 TRIM34Q9BYJ4 488 aa16.01■□□□□ 0.15
TPM1-220ENST00000559556 HLA-DOAP06340 250 aa16■□□□□ 0.15
TPM1-220ENST00000559556 DYNLL1P63167 89 aaKnown RBP16■□□□□ 0.15
TPM1-220ENST00000559556 NECAB2Q7Z6G3 386 aa16■□□□□ 0.15
TPM1-220ENST00000559556 ITPRIPQ8IWB1 547 aa16■□□□□ 0.15
TPM1-220ENST00000559556 TRIB2Q92519 343 aa16■□□□□ 0.15
TPM1-220ENST00000559556 EAF2Q96CJ1 260 aaPredicted RBP16■□□□□ 0.15
TPM1-220ENST00000559556 P2RX7Q99572 595 aaKnown RBP16■□□□□ 0.15
TPM1-220ENST00000559556 TXNRD2Q9NNW7 524 aa16■□□□□ 0.15
TPM1-220ENST00000559556 SAP30BPQ9UHR5 308 aaKnown RBP16■□□□□ 0.15
TPM1-220ENST00000559556 XRCC5P13010 732 aaKnown RBP15.99■□□□□ 0.15
TPM1-220ENST00000559556 CYP7A1P22680 504 aa15.99■□□□□ 0.15
TPM1-220ENST00000559556 TRIM32Q13049 653 aa15.99■□□□□ 0.15
TPM1-220ENST00000559556 MAP3K21Q5TCX8 1036 aa15.99■□□□□ 0.15
TPM1-220ENST00000559556 TMED8Q6PL24 325 aaPredicted RBP15.99■□□□□ 0.15
TPM1-220ENST00000559556 DIS3LQ8TF46 1054 aaKnown RBP15.99■□□□□ 0.15
TPM1-220ENST00000559556 GTF3C2Q8WUA4 911 aaPredicted RBP15.99■□□□□ 0.15
TPM1-220ENST00000559556 SOCS4Q8WXH5 440 aa15.99■□□□□ 0.15
TPM1-220ENST00000559556 HMX1Q9NP08 348 aaPredicted RBP15.99■□□□□ 0.15
TPM1-220ENST00000559556 IDH1O75874 414 aaKnown RBP15.98■□□□□ 0.15
TPM1-220ENST00000559556 ERVK-9P63128 1117 aa15.98■□□□□ 0.15
TPM1-220ENST00000559556 ERVK-24P63145 666 aa15.98■□□□□ 0.15
TPM1-220ENST00000559556 TATDN1Q6P1N9 297 aa15.98■□□□□ 0.15
TPM1-220ENST00000559556 GPRC5AQ8NFJ5 357 aa15.98■□□□□ 0.15
TPM1-220ENST00000559556 CCDC8Q9H0W5 538 aaPredicted RBP15.98■□□□□ 0.15
TPM1-220ENST00000559556 EHD4Q9H223 541 aa15.98■□□□□ 0.15
TPM1-220ENST00000559556 PEX10O60683 326 aa15.97■□□□□ 0.15
TPM1-220ENST00000559556 MAPK4P31152 587 aa15.97■□□□□ 0.15
TPM1-220ENST00000559556 MNX1P50219 401 aaPredicted RBP15.97■□□□□ 0.15
TPM1-220ENST00000559556 CEP85Q6P2H3 762 aa15.97■□□□□ 0.15
TPM1-220ENST00000559556 USP17L2Q6R6M4 530 aa15.97■□□□□ 0.15
TPM1-220ENST00000559556 MIGA1Q8NAN2 632 aa15.97■□□□□ 0.15
TPM1-220ENST00000559556 USP6NLQ92738 828 aa15.97■□□□□ 0.15
TPM1-220ENST00000559556 C12orf42Q96LP6 360 aa15.97■□□□□ 0.15
TPM1-220ENST00000559556 NUDT12Q9BQG2 462 aa15.97■□□□□ 0.15
TPM1-220ENST00000559556 EMILIN3Q9NT22 766 aa15.97■□□□□ 0.15
TPM1-220ENST00000559556 RBPJLQ9UBG7 517 aa15.97■□□□□ 0.15
TPM1-220ENST00000559556 EYSQ5T1H1 3165 aa15.96■□□□□ 0.15
TPM1-220ENST00000559556 GH2P01242 217 aa15.96■□□□□ 0.15
TPM1-220ENST00000559556 PRKAR2AP13861 404 aaKnown RBP15.96■□□□□ 0.15
TPM1-220ENST00000559556 CYP2B6P20813 491 aa15.96■□□□□ 0.15
TPM1-220ENST00000559556 HNRNPUQ00839 825 aaKnown RBP eCLIP15.96■□□□□ 0.15
TPM1-220ENST00000559556 POTEEQ6S8J3 1075 aa15.96■□□□□ 0.15
TPM1-220ENST00000559556 ERC1Q8IUD2 1116 aa15.96■□□□□ 0.15
TPM1-220ENST00000559556 TRMT44Q8IYL2 757 aaKnown RBP15.96■□□□□ 0.15
TPM1-220ENST00000559556 MAGEB6Q8N7X4 407 aa15.96■□□□□ 0.15
TPM1-220ENST00000559556 NBPF3Q9H094 633 aa15.96■□□□□ 0.15
TPM1-220ENST00000559556 PORCNQ9H237 461 aa15.96■□□□□ 0.15
TPM1-220ENST00000559556 SERPINB13Q9UIV8 391 aa15.96■□□□□ 0.15
TPM1-220ENST00000559556 OGDHLQ9ULD0 1010 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms