RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 ZNF532Q9HCE3 1301 aa7.99□□□□□ -1.13
USP3-210ENST00000559192 IKBKBO14920 756 aa7.99□□□□□ -1.13
USP3-210ENST00000559192 FGFR1OPO95684 399 aaKnown RBP7.99□□□□□ -1.13
USP3-210ENST00000559192 LIG3P49916 1009 aa7.99□□□□□ -1.13
USP3-210ENST00000559192 PLCD1P51178 756 aa7.99□□□□□ -1.13
USP3-210ENST00000559192 KIF23Q02241 960 aaPredicted RBP7.99□□□□□ -1.13
USP3-210ENST00000559192 TUBB2AQ13885 445 aa7.99□□□□□ -1.13
USP3-210ENST00000559192 CCDC121Q6ZUS5 278 aa7.99□□□□□ -1.13
USP3-210ENST00000559192 NOSTRINQ8IVI9 506 aa7.99□□□□□ -1.13
USP3-210ENST00000559192 TMTC2Q8N394 836 aa7.99□□□□□ -1.13
USP3-210ENST00000559192 TUBB2BQ9BVA1 445 aa7.99□□□□□ -1.13
USP3-210ENST00000559192 MAN1B1Q9UKM7 699 aa7.99□□□□□ -1.13
USP3-210ENST00000559192 NDUFAB1O14561 156 aa7.99□□□□□ -1.13
USP3-210ENST00000559192 PRDM1O75626 825 aa7.99□□□□□ -1.13
USP3-210ENST00000559192 SLC39A14Q15043 492 aa7.99□□□□□ -1.13
USP3-210ENST00000559192 CCDC6Q16204 474 aa7.99□□□□□ -1.13
USP3-210ENST00000559192 WHAMMP3Q1A5X7 153 aa7.99□□□□□ -1.13
USP3-210ENST00000559192 SPTY2D1Q68D10 685 aaPredicted RBP7.99□□□□□ -1.13
USP3-210ENST00000559192 CC2D1AQ6P1N0 951 aaPredicted RBP7.99□□□□□ -1.13
USP3-210ENST00000559192 FBF1Q8TES7 1133 aa7.99□□□□□ -1.13
USP3-210ENST00000559192 CDC5LQ99459 802 aaKnown RBP7.99□□□□□ -1.13
USP3-210ENST00000559192 MKRN1Q9UHC7 482 aaKnown RBP7.99□□□□□ -1.13
USP3-210ENST00000559192 V9GY48 417 aaPredicted RBP7.99□□□□□ -1.13
USP3-210ENST00000559192 MLH3Q9UHC1 1453 aa7.99□□□□□ -1.13
USP3-210ENST00000559192 BTBD18B2RXH4 712 aa7.99□□□□□ -1.13
USP3-210ENST00000559192 A1BGP04217 495 aa7.99□□□□□ -1.13
USP3-210ENST00000559192 ADORA1P30542 326 aa7.99□□□□□ -1.13
USP3-210ENST00000559192 ACTN2P35609 894 aa7.99□□□□□ -1.13
USP3-210ENST00000559192 AMPD3Q01432 767 aa7.99□□□□□ -1.13
USP3-210ENST00000559192 MSL1Q68DK7 614 aa7.99□□□□□ -1.13
USP3-210ENST00000559192 MAGEB6P1A0A0J9YX57 407 aa7.98□□□□□ -1.13
USP3-210ENST00000559192 SMIM23A6NLE4 172 aa7.98□□□□□ -1.13
USP3-210ENST00000559192 ITGA6P23229 1130 aa7.98□□□□□ -1.13
USP3-210ENST00000559192 IQCB1Q15051 598 aa7.98□□□□□ -1.13
USP3-210ENST00000559192 E4F1Q66K89 784 aaPredicted RBP7.98□□□□□ -1.13
USP3-210ENST00000559192 FCHSD1Q86WN1 690 aa7.98□□□□□ -1.13
USP3-210ENST00000559192 FMR1NBQ8N0W7 255 aaPredicted RBP7.98□□□□□ -1.13
USP3-210ENST00000559192 SECISBP2LQ93073 1101 aaKnown RBP7.98□□□□□ -1.13
USP3-210ENST00000559192 FUCA2Q9BTY2 467 aa7.98□□□□□ -1.13
USP3-210ENST00000559192 NOC4LQ9BVI4 516 aaKnown RBP7.98□□□□□ -1.13
USP3-210ENST00000559192 PUS3Q9BZE2 481 aaKnown RBP7.98□□□□□ -1.13
USP3-210ENST00000559192 ABCB6Q9NP58 842 aa7.98□□□□□ -1.13
USP3-210ENST00000559192 KIF5BP33176 963 aa7.98□□□□□ -1.13
USP3-210ENST00000559192 GNGT1P63211 74 aa7.98□□□□□ -1.13
USP3-210ENST00000559192 SF3A3Q12874 501 aaKnown RBP eCLIP7.98□□□□□ -1.131e-7■■■■□ 19.8
USP3-210ENST00000559192 UBE4AQ14139 1066 aa7.98□□□□□ -1.13
USP3-210ENST00000559192 TRIM14Q14142 442 aa7.98□□□□□ -1.13
USP3-210ENST00000559192 TMEM266Q2M3C6 531 aa7.98□□□□□ -1.13
USP3-210ENST00000559192 ZMYM1Q5SVZ6 1142 aa7.98□□□□□ -1.13
USP3-210ENST00000559192 CFAP58Q5T655 872 aa7.98□□□□□ -1.13
USP3-210ENST00000559192 NCAPH2Q6IBW4 605 aa7.98□□□□□ -1.13
USP3-210ENST00000559192 DZIP1Q86YF9 867 aaKnown RBP7.98□□□□□ -1.13
USP3-210ENST00000559192 HOMEZQ8IX15 550 aa7.98□□□□□ -1.13
USP3-210ENST00000559192 PTPRMP28827 1452 aa7.98□□□□□ -1.13
USP3-210ENST00000559192 KCNJ18B7U540 433 aa7.98□□□□□ -1.13
USP3-210ENST00000559192 SLFN14P0C7P3 912 aa7.98□□□□□ -1.13
USP3-210ENST00000559192 KCNJ12Q14500 433 aa7.98□□□□□ -1.13
USP3-210ENST00000559192 TCERG1LQ5VWI1 586 aa7.98□□□□□ -1.13
USP3-210ENST00000559192 FAM71BQ8TC56 605 aa7.98□□□□□ -1.13
USP3-210ENST00000559192 CCDC114Q96M63 670 aa7.98□□□□□ -1.13
USP3-210ENST00000559192 CDC23Q9UJX2 597 aa7.98□□□□□ -1.13
USP3-210ENST00000559192 RNF40O75150 1001 aa7.98□□□□□ -1.13
USP3-210ENST00000559192 TUBBP07437 444 aa7.98□□□□□ -1.13
USP3-210ENST00000559192 ST5P78524 1137 aa7.98□□□□□ -1.13
USP3-210ENST00000559192 MORC3Q14149 939 aa7.98□□□□□ -1.13
USP3-210ENST00000559192 TTC38Q5R3I4 469 aa7.98□□□□□ -1.13
USP3-210ENST00000559192 C8orf74Q6P047 294 aa7.98□□□□□ -1.13
USP3-210ENST00000559192 RNF168Q8IYW5 571 aaPredicted RBP7.98□□□□□ -1.13
USP3-210ENST00000559192 KLHL34Q8N239 644 aa7.98□□□□□ -1.13
USP3-210ENST00000559192 TSGA10Q9BZW7 698 aa7.98□□□□□ -1.13
USP3-210ENST00000559192 OSBPL5Q9H0X9 879 aaPredicted RBP7.98□□□□□ -1.13
USP3-210ENST00000559192 ATP8B1O43520 1251 aa7.97□□□□□ -1.13
USP3-210ENST00000559192 VAV2P52735 878 aa7.97□□□□□ -1.13
USP3-210ENST00000559192 TBC1D8BQ0IIM8 1120 aa7.97□□□□□ -1.13
USP3-210ENST00000559192 ZNF444Q8N0Y2 327 aaPredicted RBP7.97□□□□□ -1.13
USP3-210ENST00000559192 SELENOSQ9BQE4 189 aa7.97□□□□□ -1.13
USP3-210ENST00000559192 CSRNP2Q9H175 543 aa7.97□□□□□ -1.13
USP3-210ENST00000559192 SAR1BQ9Y6B6 198 aa7.97□□□□□ -1.13
USP3-210ENST00000559192 IRS4O14654 1257 aaPredicted RBP7.97□□□□□ -1.13
USP3-210ENST00000559192 CCT5P48643 541 aa7.97□□□□□ -1.13
USP3-210ENST00000559192 EPHA10Q5JZY3 1008 aa7.97□□□□□ -1.13
USP3-210ENST00000559192 MIPOL1Q8TD10 442 aa7.97□□□□□ -1.13
USP3-210ENST00000559192 UBLCP1Q8WVY7 318 aaPredicted RBP7.97□□□□□ -1.13
USP3-210ENST00000559192 DPF2Q92785 391 aa7.97□□□□□ -1.13
USP3-210ENST00000559192 C19orf44Q9H6X5 657 aa7.97□□□□□ -1.13
USP3-210ENST00000559192 FAM170AA1A519 330 aa7.97□□□□□ -1.13
USP3-210ENST00000559192 MYO1CO00159 1063 aa7.97□□□□□ -1.13
USP3-210ENST00000559192 STAMBPO95630 424 aa7.97□□□□□ -1.13
USP3-210ENST00000559192 LTKP29376 864 aa7.97□□□□□ -1.13
USP3-210ENST00000559192 ATP1A2P50993 1020 aa7.97□□□□□ -1.13
USP3-210ENST00000559192 C6orf163Q5TEZ5 329 aa7.97□□□□□ -1.13
USP3-210ENST00000559192 LRCH2Q5VUJ6 765 aa7.97□□□□□ -1.13
USP3-210ENST00000559192 DCAF5Q96JK2 942 aa7.97□□□□□ -1.13
USP3-210ENST00000559192 MYCBPQ99417 103 aaPredicted RBP7.97□□□□□ -1.13
USP3-210ENST00000559192 SH3TC1Q8TE82 1336 aa7.97□□□□□ -1.13
USP3-210ENST00000559192 PPP6R2O75170 966 aa7.97□□□□□ -1.13
USP3-210ENST00000559192 CLNS1AP54105 237 aaKnown RBP7.97□□□□□ -1.13
USP3-210ENST00000559192 PI16Q6UXB8 463 aa7.97□□□□□ -1.13
USP3-210ENST00000559192 FAM184BQ9ULE4 1060 aa7.97□□□□□ -1.13
USP3-210ENST00000559192 PDE4BQ07343 736 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms