RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 CDK8P49336 464 aa14.61□□□□□ -0.07
TPM1-209ENST00000558072 PLCD1P51178 756 aa14.61□□□□□ -0.07
TPM1-209ENST00000558072 GABPAQ06546 454 aa14.61□□□□□ -0.07
TPM1-209ENST00000558072 PRKG1Q13976 671 aa14.61□□□□□ -0.07
TPM1-209ENST00000558072 SHROOM1Q2M3G4 852 aaPredicted RBP14.61□□□□□ -0.07
TPM1-209ENST00000558072 NBPF12Q5TAG4 269 aaPredicted RBP14.61□□□□□ -0.07
TPM1-209ENST00000558072 KRT26Q7Z3Y9 468 aa14.61□□□□□ -0.07
TPM1-209ENST00000558072 TBC1D10CQ8IV04 446 aa14.61□□□□□ -0.07
TPM1-209ENST00000558072 SLC44A5Q8NCS7 719 aa14.61□□□□□ -0.07
TPM1-209ENST00000558072 DYNLL2Q96FJ2 89 aa14.61□□□□□ -0.07
TPM1-209ENST00000558072 ZSCAN31Q96LW9 406 aaPredicted RBP14.61□□□□□ -0.07
TPM1-209ENST00000558072 TEPSINQ96N21 525 aa14.61□□□□□ -0.07
TPM1-209ENST00000558072 KIF2CQ99661 725 aa14.61□□□□□ -0.07
TPM1-209ENST00000558072 INCENPQ9NQS7 918 aa14.61□□□□□ -0.07
TPM1-209ENST00000558072 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.61□□□□□ -0.07
TPM1-209ENST00000558072 TSPY3P0CV98 308 aa14.6□□□□□ -0.07
TPM1-209ENST00000558072 TSPY8P0CW00 308 aa14.6□□□□□ -0.07
TPM1-209ENST00000558072 COL9A3Q14050 684 aaPredicted RBP14.6□□□□□ -0.07
TPM1-209ENST00000558072 RRP12Q5JTH9 1297 aaKnown RBP14.6□□□□□ -0.07
TPM1-209ENST00000558072 SYNE3Q6ZMZ3 975 aa14.6□□□□□ -0.07
TPM1-209ENST00000558072 MOB2Q70IA6 237 aa14.6□□□□□ -0.07
TPM1-209ENST00000558072 LDHDQ86WU2 507 aa14.6□□□□□ -0.07
TPM1-209ENST00000558072 MB21D2Q8IYB1 491 aaPredicted RBP14.6□□□□□ -0.07
TPM1-209ENST00000558072 CDCA5Q96FF9 252 aa14.6□□□□□ -0.07
TPM1-209ENST00000558072 TTC14Q96N46 770 aa14.6□□□□□ -0.07
TPM1-209ENST00000558072 NBPF3Q9H094 633 aa14.6□□□□□ -0.07
TPM1-209ENST00000558072 ZNF408Q9H9D4 720 aa14.6□□□□□ -0.07
TPM1-209ENST00000558072 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.6□□□□□ -0.07
TPM1-209ENST00000558072 CABP5Q9NP86 173 aa14.6□□□□□ -0.07
TPM1-209ENST00000558072 TCP11L1Q9NUJ3 509 aa14.6□□□□□ -0.07
TPM1-209ENST00000558072 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.6□□□□□ -0.07
TPM1-209ENST00000558072 PAPPA2Q9BXP8 1791 aa14.6□□□□□ -0.07
TPM1-209ENST00000558072 B4E1Z4 1266 aa14.59□□□□□ -0.07
TPM1-209ENST00000558072 PRC1O43663 620 aa14.59□□□□□ -0.07
TPM1-209ENST00000558072 KDM4AO75164 1064 aa14.59□□□□□ -0.07
TPM1-209ENST00000558072 LIFRP42702 1097 aa14.59□□□□□ -0.07
TPM1-209ENST00000558072 EXOSC10Q01780 885 aaKnown RBP14.59□□□□□ -0.07
TPM1-209ENST00000558072 MAP3K10Q02779 954 aa14.59□□□□□ -0.07
TPM1-209ENST00000558072 ADCK5Q3MIX3 580 aa14.59□□□□□ -0.07
TPM1-209ENST00000558072 CDC37L1Q7L3B6 337 aa14.59□□□□□ -0.07
TPM1-209ENST00000558072 DNAJC18Q9H819 358 aa14.59□□□□□ -0.07
TPM1-209ENST00000558072 SH2B1Q9NRF2 756 aaPredicted RBP14.59□□□□□ -0.07
TPM1-209ENST00000558072 ZSWIM5Q9P217 1185 aa14.59□□□□□ -0.07
TPM1-209ENST00000558072 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.59□□□□□ -0.07
TPM1-209ENST00000558072 IFIT3O14879 490 aaKnown RBP14.58□□□□□ -0.08
TPM1-209ENST00000558072 PPP2R5BQ15173 497 aa14.58□□□□□ -0.08
TPM1-209ENST00000558072 CERKLQ49MI3 558 aaPredicted RBP14.58□□□□□ -0.08
TPM1-209ENST00000558072 CHADLQ6NUI6 762 aa14.58□□□□□ -0.08
TPM1-209ENST00000558072 TATDN1Q6P1N9 297 aa14.58□□□□□ -0.08
TPM1-209ENST00000558072 STOX1Q6ZVD7 989 aa14.58□□□□□ -0.08
TPM1-209ENST00000558072 MIGA2Q7L4E1 593 aa14.58□□□□□ -0.08
TPM1-209ENST00000558072 DGKHQ86XP1 1220 aa14.58□□□□□ -0.08
TPM1-209ENST00000558072 NEDD1Q8NHV4 660 aa14.58□□□□□ -0.08
TPM1-209ENST00000558072 UPF3BQ9BZI7 483 aaKnown RBP14.58□□□□□ -0.08
TPM1-209ENST00000558072 ANGEL1Q9UNK9 670 aaKnown RBP14.58□□□□□ -0.08
TPM1-209ENST00000558072 LIMCH1Q9UPQ0 1083 aa14.58□□□□□ -0.08
TPM1-209ENST00000558072 PPP1R12BO60237 982 aaPredicted RBP14.57□□□□□ -0.08
TPM1-209ENST00000558072 RCAN1P53805 252 aa14.57□□□□□ -0.08
TPM1-209ENST00000558072 TFAP4Q01664 338 aa14.57□□□□□ -0.08
TPM1-209ENST00000558072 RRP1BQ14684 758 aaKnown RBP14.57□□□□□ -0.08
TPM1-209ENST00000558072 WTAPQ15007 396 aa14.57□□□□□ -0.08
TPM1-209ENST00000558072 TMEM179Q6ZVK1 233 aa14.57□□□□□ -0.08
TPM1-209ENST00000558072 ZSCAN10Q96SZ4 725 aaPredicted RBP14.57□□□□□ -0.08
TPM1-209ENST00000558072 ZNF341Q9BYN7 854 aa14.57□□□□□ -0.08
TPM1-209ENST00000558072 AGXT2Q9BYV1 514 aa14.57□□□□□ -0.08
TPM1-209ENST00000558072 SYNPO2Q9UMS6 1093 aa14.57□□□□□ -0.08
TPM1-209ENST00000558072 NEDD4P46934 1319 aa14.57□□□□□ -0.08
TPM1-209ENST00000558072 MYH8P13535 1937 aa14.56□□□□□ -0.08
TPM1-209ENST00000558072 CCDC69A6NI79 296 aa14.56□□□□□ -0.08
TPM1-209ENST00000558072 DHX16O60231 1041 aaKnown RBP14.56□□□□□ -0.08
TPM1-209ENST00000558072 PRDM1O75626 825 aa14.56□□□□□ -0.08
TPM1-209ENST00000558072 CALM1P0DP23 149 aa14.56□□□□□ -0.08
TPM1-209ENST00000558072 CALM2P0DP24 149 aa14.56□□□□□ -0.08
TPM1-209ENST00000558072 CALM3P0DP25 149 aa14.56□□□□□ -0.08
TPM1-209ENST00000558072 RASA1P20936 1047 aa14.56□□□□□ -0.08
TPM1-209ENST00000558072 TMEM67Q5HYA8 995 aa14.56□□□□□ -0.08
TPM1-209ENST00000558072 Q6ZUG5 572 aa14.56□□□□□ -0.08
TPM1-209ENST00000558072 TBC1D2Q9BYX2 928 aa14.56□□□□□ -0.08
TPM1-209ENST00000558072 ATAD5Q96QE3 1844 aa14.56□□□□□ -0.08
TPM1-209ENST00000558072 PLIN4Q96Q06 1357 aa14.56□□□□□ -0.08
TPM1-209ENST00000558072 TRPM7Q96QT4 1865 aa14.55□□□□□ -0.08
TPM1-209ENST00000558072 UNCXA6NJT0 531 aa14.55□□□□□ -0.08
TPM1-209ENST00000558072 K7ELQ4 463 aaPredicted RBP14.55□□□□□ -0.08
TPM1-209ENST00000558072 ASNSP08243 561 aa14.55□□□□□ -0.08
TPM1-209ENST00000558072 JAG1P78504 1218 aa14.55□□□□□ -0.08
TPM1-209ENST00000558072 ABCB5Q2M3G0 1257 aa14.55□□□□□ -0.08
TPM1-209ENST00000558072 IFIT1BQ5T764 474 aaKnown RBP14.55□□□□□ -0.08
TPM1-209ENST00000558072 NFXL1Q6ZNB6 911 aa14.55□□□□□ -0.08
TPM1-209ENST00000558072 CCDC84Q86UT8 332 aaPredicted RBP14.55□□□□□ -0.08
TPM1-209ENST00000558072 SGMS1Q86VZ5 419 aa14.55□□□□□ -0.08
TPM1-209ENST00000558072 ANKS1AQ92625 1134 aa14.55□□□□□ -0.08
TPM1-209ENST00000558072 ZNF274Q96GC6 653 aaPredicted RBP14.55□□□□□ -0.08
TPM1-209ENST00000558072 SH2D4AQ9H788 454 aa14.55□□□□□ -0.08
TPM1-209ENST00000558072 KANSL2Q9H9L4 492 aa14.55□□□□□ -0.08
TPM1-209ENST00000558072 CCDC196A0A1B0GTZ2 297 aa14.54□□□□□ -0.08
TPM1-209ENST00000558072 SH2B2O14492 632 aaPredicted RBP14.54□□□□□ -0.08
TPM1-209ENST00000558072 CTNND1O60716 968 aaKnown RBP14.54□□□□□ -0.08
TPM1-209ENST00000558072 GDF11O95390 407 aa14.54□□□□□ -0.08
TPM1-209ENST00000558072 ITGBL1O95965 494 aaPredicted RBP14.54□□□□□ -0.08
TPM1-209ENST00000558072 SHMT1P34896 483 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms