RNA–Protein interactions for RNA: ENST00000557768.1

HNRNPC-233, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-233ENST00000557768 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.62□□□□□ -1.19
HNRNPC-233ENST00000557768 SPACA7Q96KW9 195 aa7.62□□□□□ -1.19
HNRNPC-233ENST00000557768 SIN3AQ96ST3 1273 aa7.62□□□□□ -1.19
HNRNPC-233ENST00000557768 SYT17Q9BSW7 474 aa7.62□□□□□ -1.19
HNRNPC-233ENST00000557768 ROCK2O75116 1388 aaKnown RBP7.61□□□□□ -1.19
HNRNPC-233ENST00000557768 PROCP04070 461 aa7.61□□□□□ -1.19
HNRNPC-233ENST00000557768 HOXD8P13378 290 aaPredicted RBP7.61□□□□□ -1.19
HNRNPC-233ENST00000557768 NME9Q86XW9 330 aa7.61□□□□□ -1.19
HNRNPC-233ENST00000557768 ZSCAN29Q8IWY8 852 aaPredicted RBP7.61□□□□□ -1.19
HNRNPC-233ENST00000557768 TTC9Q92623 222 aa7.61□□□□□ -1.19
HNRNPC-233ENST00000557768 MTFR1LQ9H019 292 aa7.61□□□□□ -1.19
HNRNPC-233ENST00000557768 NLRP2Q9NX02 1062 aa7.61□□□□□ -1.19
HNRNPC-233ENST00000557768 CNTN3Q9P232 1028 aa7.61□□□□□ -1.19
HNRNPC-233ENST00000557768 KANSL3Q9P2N6 904 aa7.61□□□□□ -1.19
HNRNPC-233ENST00000557768 CD163L1Q9NR16 1453 aa7.61□□□□□ -1.19
HNRNPC-233ENST00000557768 TCF3P15923 654 aa7.6□□□□□ -1.19
HNRNPC-233ENST00000557768 ATP11AP98196 1134 aa7.6□□□□□ -1.19
HNRNPC-233ENST00000557768 NCAPG2Q86XI2 1143 aa7.6□□□□□ -1.19
HNRNPC-233ENST00000557768 DCTN4Q9UJW0 460 aa7.6□□□□□ -1.19
HNRNPC-233ENST00000557768 TRIM33Q9UPN9 1127 aa7.6□□□□□ -1.19
HNRNPC-233ENST00000557768 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.6□□□□□ -1.19
HNRNPC-233ENST00000557768 USP31Q70CQ4 1352 aa7.59□□□□□ -1.19
HNRNPC-233ENST00000557768 IL2RBP14784 551 aa7.59□□□□□ -1.19
HNRNPC-233ENST00000557768 ZNF827Q17R98 1081 aa7.59□□□□□ -1.19
HNRNPC-233ENST00000557768 GJD3Q8N144 294 aa7.59□□□□□ -1.19
HNRNPC-233ENST00000557768 IL22RA1Q8N6P7 574 aa7.59□□□□□ -1.19
HNRNPC-233ENST00000557768 C1orf127Q8N9H9 656 aa7.59□□□□□ -1.19
HNRNPC-233ENST00000557768 ANKRD24Q8TF21 1146 aa7.59□□□□□ -1.19
HNRNPC-233ENST00000557768 ASB16Q96NS5 453 aa7.59□□□□□ -1.19
HNRNPC-233ENST00000557768 TAF1LQ8IZX4 1826 aa7.59□□□□□ -1.19
HNRNPC-233ENST00000557768 SBNO2Q9Y2G9 1366 aa7.59□□□□□ -1.2
HNRNPC-233ENST00000557768 ELNP15502 786 aa7.58□□□□□ -1.2
HNRNPC-233ENST00000557768 CES1P23141 567 aa7.58□□□□□ -1.2
HNRNPC-233ENST00000557768 USP5P45974 858 aa7.58□□□□□ -1.2
HNRNPC-233ENST00000557768 TAGLNQ01995 201 aaKnown RBP7.58□□□□□ -1.2
HNRNPC-233ENST00000557768 CEP135Q66GS9 1140 aa7.58□□□□□ -1.2
HNRNPC-233ENST00000557768 SHISA2Q6UWI4 295 aa7.58□□□□□ -1.2
HNRNPC-233ENST00000557768 XKR5Q6UX68 686 aa7.58□□□□□ -1.2
HNRNPC-233ENST00000557768 FMR1NBQ8N0W7 255 aaPredicted RBP7.58□□□□□ -1.2
HNRNPC-233ENST00000557768 TMC1Q8TDI8 760 aa7.58□□□□□ -1.2
HNRNPC-233ENST00000557768 NACC1Q96RE7 527 aa7.58□□□□□ -1.2
HNRNPC-233ENST00000557768 BCL11AQ9H165 835 aa7.58□□□□□ -1.2
HNRNPC-233ENST00000557768 RASSF4Q9H2L5 321 aa7.58□□□□□ -1.2
HNRNPC-233ENST00000557768 CHRDQ9H2X0 955 aa7.58□□□□□ -1.2
HNRNPC-233ENST00000557768 C5P01031 1676 aa7.57□□□□□ -1.2
HNRNPC-233ENST00000557768 ITGB4P16144 1822 aa7.57□□□□□ -1.2
HNRNPC-233ENST00000557768 GATA4P43694 442 aa7.57□□□□□ -1.2
HNRNPC-233ENST00000557768 FBXO33Q7Z6M2 555 aa7.57□□□□□ -1.2
HNRNPC-233ENST00000557768 DDX54Q8TDD1 881 aaKnown RBP7.57□□□□□ -1.2
HNRNPC-233ENST00000557768 LTV1Q96GA3 475 aaPredicted RBP7.57□□□□□ -1.2
HNRNPC-233ENST00000557768 LACRTQ9GZZ8 138 aa7.57□□□□□ -1.2
HNRNPC-233ENST00000557768 SLC12A5Q9H2X9 1139 aa7.57□□□□□ -1.2
HNRNPC-233ENST00000557768 FOXD3Q9UJU5 478 aaPredicted RBP7.57□□□□□ -1.2
HNRNPC-233ENST00000557768 KIF20BQ96Q89 1820 aa7.57□□□□□ -1.2
HNRNPC-233ENST00000557768 EDC4Q6P2E9 1401 aaKnown RBP7.56□□□□□ -1.2
HNRNPC-233ENST00000557768 PHACTR2O75167 634 aa7.56□□□□□ -1.2
HNRNPC-233ENST00000557768 SMNDC1O75940 238 aaKnown RBP eCLIP7.56□□□□□ -1.21e-6■□□□□ 8.2
HNRNPC-233ENST00000557768 KIF4AO95239 1232 aa7.56□□□□□ -1.2
HNRNPC-233ENST00000557768 SELPP16109 830 aa7.56□□□□□ -1.2
HNRNPC-233ENST00000557768 GPR162Q16538 588 aa7.56□□□□□ -1.2
HNRNPC-233ENST00000557768 HDGFL2Q7Z4V5 671 aaPredicted RBP7.56□□□□□ -1.2
HNRNPC-233ENST00000557768 CEP120Q8N960 986 aa7.56□□□□□ -1.2
HNRNPC-233ENST00000557768 BRPF3Q9ULD4 1205 aa7.56□□□□□ -1.2
HNRNPC-233ENST00000557768 MAP3K5Q99683 1374 aa7.56□□□□□ -1.2
HNRNPC-233ENST00000557768 PNPLA7Q6ZV29 1317 aa7.55□□□□□ -1.2
HNRNPC-233ENST00000557768 C9orf172C9J069 976 aa7.55□□□□□ -1.2
HNRNPC-233ENST00000557768 TNFRSF21O75509 655 aa7.55□□□□□ -1.2
HNRNPC-233ENST00000557768 VAMP1P23763 118 aa7.55□□□□□ -1.2
HNRNPC-233ENST00000557768 CDC25BP30305 580 aa7.55□□□□□ -1.2
HNRNPC-233ENST00000557768 C1QTNF8P60827 252 aa7.55□□□□□ -1.2
HNRNPC-233ENST00000557768 EHHADHQ08426 723 aa7.55□□□□□ -1.2
HNRNPC-233ENST00000557768 DOC2BQ14184 412 aa7.55□□□□□ -1.2
HNRNPC-233ENST00000557768 EAPPQ56P03 285 aaPredicted RBP7.55□□□□□ -1.2
HNRNPC-233ENST00000557768 FBXO11Q86XK2 927 aa7.55□□□□□ -1.2
HNRNPC-233ENST00000557768 DTWD1Q8N5C7 304 aa7.55□□□□□ -1.2
HNRNPC-233ENST00000557768 SYTL4Q96C24 671 aaPredicted RBP7.55□□□□□ -1.2
HNRNPC-233ENST00000557768 CARD11Q9BXL7 1154 aa7.55□□□□□ -1.2
HNRNPC-233ENST00000557768 PBX4Q9BYU1 374 aa7.55□□□□□ -1.2
HNRNPC-233ENST00000557768 GOLGB1Q14789 3259 aaKnown RBP7.55□□□□□ -1.2
HNRNPC-233ENST00000557768 A0A1W2PP64 1363 aa7.55□□□□□ -1.2
HNRNPC-233ENST00000557768 EREGO14944 169 aa7.54□□□□□ -1.2
HNRNPC-233ENST00000557768 NDUFB5O43674 189 aa7.54□□□□□ -1.2
HNRNPC-233ENST00000557768 DEAF1O75398 565 aaPredicted RBP7.54□□□□□ -1.2
HNRNPC-233ENST00000557768 TRPA1O75762 1119 aa7.54□□□□□ -1.2
HNRNPC-233ENST00000557768 FURINP09958 794 aa7.54□□□□□ -1.2
HNRNPC-233ENST00000557768 ACPPP15309 386 aa7.54□□□□□ -1.2
HNRNPC-233ENST00000557768 FBLN1P23142 703 aa7.54□□□□□ -1.2
HNRNPC-233ENST00000557768 IP6K1Q92551 441 aa7.54□□□□□ -1.2
HNRNPC-233ENST00000557768 TERF2IPQ9NYB0 399 aa7.54□□□□□ -1.2
HNRNPC-233ENST00000557768 TFCP2L1Q9NZI6 479 aa7.54□□□□□ -1.2
HNRNPC-233ENST00000557768 SALL4Q9UJQ4 1053 aa7.54□□□□□ -1.2
HNRNPC-233ENST00000557768 NSD2O96028 1365 aa7.54□□□□□ -1.2
HNRNPC-233ENST00000557768 MEGF6O75095 1541 aa7.53□□□□□ -1.2
HNRNPC-233ENST00000557768 TOGARAM1Q9Y4F4 1720 aa7.53□□□□□ -1.2
HNRNPC-233ENST00000557768 IGHA2P01877 340 aa7.53□□□□□ -1.2
HNRNPC-233ENST00000557768 POLD1P28340 1107 aa7.53□□□□□ -1.2
HNRNPC-233ENST00000557768 COL19A1Q14993 1142 aa7.53□□□□□ -1.2
HNRNPC-233ENST00000557768 NLGN2Q8NFZ4 835 aa7.53□□□□□ -1.2
HNRNPC-233ENST00000557768 SNX29Q8TEQ0 813 aa7.53□□□□□ -1.2
HNRNPC-233ENST00000557768 PMEPA1Q969W9 287 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms