RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 SIRT2Q8IXJ6 389 aa12.83□□□□□ -0.36
SPTLC2-205ENST00000556607 COA7Q96BR5 231 aa12.83□□□□□ -0.36
SPTLC2-205ENST00000556607 DNAJC18Q9H819 358 aa12.83□□□□□ -0.36
SPTLC2-205ENST00000556607 CENPFP49454 3210 aa12.83□□□□□ -0.36
SPTLC2-205ENST00000556607 C19orf81C9J6K1 198 aa12.82□□□□□ -0.36
SPTLC2-205ENST00000556607 FLT3LGP49771 235 aa12.82□□□□□ -0.36
SPTLC2-205ENST00000556607 BACE1P56817 501 aa12.82□□□□□ -0.36
SPTLC2-205ENST00000556607 ZYXQ15942 572 aaKnown RBP12.82□□□□□ -0.36
SPTLC2-205ENST00000556607 SHROOM1Q2M3G4 852 aaPredicted RBP12.82□□□□□ -0.36
SPTLC2-205ENST00000556607 C20orf194Q5TEA3 1177 aa12.82□□□□□ -0.36
SPTLC2-205ENST00000556607 SLAIN1Q8ND83 568 aa12.82□□□□□ -0.36
SPTLC2-205ENST00000556607 FEZ1Q99689 392 aa12.82□□□□□ -0.36
SPTLC2-205ENST00000556607 WDR18Q9BV38 432 aa12.82□□□□□ -0.36
SPTLC2-205ENST00000556607 RNF208Q9H0X6 261 aa12.82□□□□□ -0.36
SPTLC2-205ENST00000556607 ASCC2Q9H1I8 757 aaPredicted RBP12.82□□□□□ -0.36
SPTLC2-205ENST00000556607 BOLA2Q9H3K6 86 aa12.82□□□□□ -0.36
SPTLC2-205ENST00000556607 SERPINB13Q9UIV8 391 aa12.82□□□□□ -0.36
SPTLC2-205ENST00000556607 ZBTB21Q9ULJ3 1066 aa12.82□□□□□ -0.36
SPTLC2-205ENST00000556607 ADCY3O60266 1144 aa12.81□□□□□ -0.36
SPTLC2-205ENST00000556607 GH2P01242 217 aa12.81□□□□□ -0.36
SPTLC2-205ENST00000556607 PDE6AP16499 860 aa12.81□□□□□ -0.36
SPTLC2-205ENST00000556607 GCLCP48506 637 aaPredicted RBP12.81□□□□□ -0.36
SPTLC2-205ENST00000556607 JAG1P78504 1218 aa12.81□□□□□ -0.36
SPTLC2-205ENST00000556607 RAB3GAP1Q15042 981 aa12.81□□□□□ -0.36
SPTLC2-205ENST00000556607 FAM110CQ1W6H9 321 aa12.81□□□□□ -0.36
SPTLC2-205ENST00000556607 CERKLQ49MI3 558 aaPredicted RBP12.81□□□□□ -0.36
SPTLC2-205ENST00000556607 SH3D19Q5HYK7 790 aa12.81□□□□□ -0.36
SPTLC2-205ENST00000556607 TMED8Q6PL24 325 aaPredicted RBP12.81□□□□□ -0.36
SPTLC2-205ENST00000556607 NKX2-3Q8TAU0 364 aa12.81□□□□□ -0.36
SPTLC2-205ENST00000556607 EDC3Q96F86 508 aaKnown RBP12.81□□□□□ -0.36
SPTLC2-205ENST00000556607 CRNKL1Q9BZJ0 848 aaKnown RBP12.81□□□□□ -0.36
SPTLC2-205ENST00000556607 CABP5Q9NP86 173 aa12.81□□□□□ -0.36
SPTLC2-205ENST00000556607 GINM1Q9NU53 330 aa12.81□□□□□ -0.36
SPTLC2-205ENST00000556607 ZNF532Q9HCE3 1301 aa12.81□□□□□ -0.36
SPTLC2-205ENST00000556607 MYH8P13535 1937 aa12.8□□□□□ -0.36
SPTLC2-205ENST00000556607 CCL5P13501 91 aa12.8□□□□□ -0.36
SPTLC2-205ENST00000556607 ELNP15502 786 aa12.8□□□□□ -0.36
SPTLC2-205ENST00000556607 PDE3AQ14432 1141 aa12.8□□□□□ -0.36
SPTLC2-205ENST00000556607 USP17L2Q6R6M4 530 aa12.8□□□□□ -0.36
SPTLC2-205ENST00000556607 METTL16Q86W50 562 aaKnown RBP12.8□□□□□ -0.36
SPTLC2-205ENST00000556607 CCAR1Q8IX12 1150 aaKnown RBP12.8□□□□□ -0.36
SPTLC2-205ENST00000556607 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.8□□□□□ -0.36
SPTLC2-205ENST00000556607 LRRCC1Q9C099 1032 aa12.8□□□□□ -0.36
SPTLC2-205ENST00000556607 PAG1Q9NWQ8 432 aa12.8□□□□□ -0.36
SPTLC2-205ENST00000556607 MCM9Q9NXL9 1143 aa12.8□□□□□ -0.36
SPTLC2-205ENST00000556607 MYH7P12883 1935 aa12.8□□□□□ -0.36
SPTLC2-205ENST00000556607 HTTP42858 3142 aa12.79□□□□□ -0.36
SPTLC2-205ENST00000556607 MPHOSPH10O00566 681 aaKnown RBP12.79□□□□□ -0.36
SPTLC2-205ENST00000556607 SMARCA5O60264 1052 aaPredicted RBP12.79□□□□□ -0.36
SPTLC2-205ENST00000556607 PLCD1P51178 756 aa12.79□□□□□ -0.36
SPTLC2-205ENST00000556607 ABCB5Q2M3G0 1257 aa12.79□□□□□ -0.36
SPTLC2-205ENST00000556607 SDR42E1Q8WUS8 393 aa12.79□□□□□ -0.36
SPTLC2-205ENST00000556607 RIOK1Q9BRS2 568 aaKnown RBP12.79□□□□□ -0.36
SPTLC2-205ENST00000556607 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.79□□□□□ -0.36
SPTLC2-205ENST00000556607 CWC22Q9HCG8 908 aaKnown RBP12.79□□□□□ -0.36
SPTLC2-205ENST00000556607 DOCK3Q8IZD9 2030 aa12.78□□□□□ -0.36
SPTLC2-205ENST00000556607 INHAP05111 366 aa12.78□□□□□ -0.36
SPTLC2-205ENST00000556607 TATDN1Q6P1N9 297 aa12.78□□□□□ -0.36
SPTLC2-205ENST00000556607 LCORLQ8N3X6 602 aa12.78□□□□□ -0.36
SPTLC2-205ENST00000556607 PXYLP1Q8TE99 480 aa12.78□□□□□ -0.36
SPTLC2-205ENST00000556607 DPF3Q92784 378 aa12.78□□□□□ -0.36
SPTLC2-205ENST00000556607 GCC1Q96CN9 775 aa12.78□□□□□ -0.36
SPTLC2-205ENST00000556607 P2RX7Q99572 595 aaKnown RBP12.78□□□□□ -0.36
SPTLC2-205ENST00000556607 PAGR1Q9BTK6 254 aa12.78□□□□□ -0.36
SPTLC2-205ENST00000556607 UNC93B1Q9H1C4 597 aa12.78□□□□□ -0.36
SPTLC2-205ENST00000556607 EHD4Q9H223 541 aa12.78□□□□□ -0.36
SPTLC2-205ENST00000556607 ARMT1Q9H993 441 aa12.78□□□□□ -0.36
SPTLC2-205ENST00000556607 BAZ2AQ9UIF9 1905 aaKnown RBP12.78□□□□□ -0.36
SPTLC2-205ENST00000556607 PEX10O60683 326 aa12.77□□□□□ -0.37
SPTLC2-205ENST00000556607 TFRCP02786 760 aaKnown RBP12.77□□□□□ -0.37
SPTLC2-205ENST00000556607 GJB1P08034 283 aa12.77□□□□□ -0.37
SPTLC2-205ENST00000556607 ATP5JP18859 108 aa12.77□□□□□ -0.37
SPTLC2-205ENST00000556607 HOXA7P31268 230 aaPredicted RBP12.77□□□□□ -0.37
SPTLC2-205ENST00000556607 GJA8P48165 433 aa12.77□□□□□ -0.37
SPTLC2-205ENST00000556607 HERVK_113P62684 666 aa12.77□□□□□ -0.37
SPTLC2-205ENST00000556607 IRF5Q13568 498 aa12.77□□□□□ -0.37
SPTLC2-205ENST00000556607 SLFNL1Q499Z3 407 aa12.77□□□□□ -0.37
SPTLC2-205ENST00000556607 AMOTL1Q8IY63 956 aa12.77□□□□□ -0.37
SPTLC2-205ENST00000556607 GPRC5AQ8NFJ5 357 aa12.77□□□□□ -0.37
SPTLC2-205ENST00000556607 DDRGK1Q96HY6 314 aa12.77□□□□□ -0.37
SPTLC2-205ENST00000556607 EMILIN3Q9NT22 766 aa12.77□□□□□ -0.37
SPTLC2-205ENST00000556607 MBD4O95243 580 aa12.76□□□□□ -0.37
SPTLC2-205ENST00000556607 CYP2B6P20813 491 aa12.76□□□□□ -0.37
SPTLC2-205ENST00000556607 ADD2P35612 726 aa12.76□□□□□ -0.37
SPTLC2-205ENST00000556607 USP14P54578 494 aa12.76□□□□□ -0.37
SPTLC2-205ENST00000556607 WDR78Q5VTH9 848 aa12.76□□□□□ -0.37
SPTLC2-205ENST00000556607 ZSCAN25Q6NSZ9 544 aa12.76□□□□□ -0.37
SPTLC2-205ENST00000556607 U2AF1L4Q8WU68 220 aaKnown RBP12.76□□□□□ -0.37
SPTLC2-205ENST00000556607 GPATCH3Q96I76 525 aa12.76□□□□□ -0.37
SPTLC2-205ENST00000556607 HAUS7Q99871 368 aa12.76□□□□□ -0.37
SPTLC2-205ENST00000556607 DCP1AQ9NPI6 582 aaPredicted RBP12.76□□□□□ -0.37
SPTLC2-205ENST00000556607 DDX60LQ5H9U9 1706 aaKnown RBP12.76□□□□□ -0.37
SPTLC2-205ENST00000556607 TCRBV5S4A2TA0A5A2 114 aa12.75□□□□□ -0.37
SPTLC2-205ENST00000556607 USP17L15C9J2P7 530 aa12.75□□□□□ -0.37
SPTLC2-205ENST00000556607 USP17L13C9JLJ4 530 aa12.75□□□□□ -0.37
SPTLC2-205ENST00000556607 USP17L11C9JVI0 530 aa12.75□□□□□ -0.37
SPTLC2-205ENST00000556607 USP17L18D6R9N7 530 aa12.75□□□□□ -0.37
SPTLC2-205ENST00000556607 USP17L22D6RA61 530 aa12.75□□□□□ -0.37
SPTLC2-205ENST00000556607 USP17L17D6RBQ6 530 aa12.75□□□□□ -0.37
SPTLC2-205ENST00000556607 USP17L19D6RCP7 530 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms