RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 LONRF2Q1L5Z9 754 aa16.88■□□□□ 0.29
ARHGEF40-207ENST00000556399 RABEP2Q9H5N1 569 aa16.88■□□□□ 0.29
ARHGEF40-207ENST00000556399 C6orf50Q9HD87 102 aa16.88■□□□□ 0.29
ARHGEF40-207ENST00000556399 PLEKHG1Q9ULL1 1385 aa16.88■□□□□ 0.29
ARHGEF40-207ENST00000556399 GCOM1H8Y6P7 765 aaPredicted RBP16.88■□□□□ 0.29
ARHGEF40-207ENST00000556399 ZPR1O75312 459 aa16.88■□□□□ 0.29
ARHGEF40-207ENST00000556399 MYZAPP0CAP1 466 aa16.88■□□□□ 0.29
ARHGEF40-207ENST00000556399 ZNF654Q8IZM8 581 aa16.88■□□□□ 0.29
ARHGEF40-207ENST00000556399 PLCD3Q8N3E9 789 aa16.88■□□□□ 0.29
ARHGEF40-207ENST00000556399 OSBP2Q969R2 916 aa16.88■□□□□ 0.29
ARHGEF40-207ENST00000556399 GPHNQ9NQX3 736 aaPredicted RBP16.88■□□□□ 0.29
ARHGEF40-207ENST00000556399 PPP2R5BQ15173 497 aa16.87■□□□□ 0.29
ARHGEF40-207ENST00000556399 APOA5Q6Q788 366 aa16.87■□□□□ 0.29
ARHGEF40-207ENST00000556399 CDC23Q9UJX2 597 aa16.87■□□□□ 0.29
ARHGEF40-207ENST00000556399 SAR1BQ9Y6B6 198 aa16.87■□□□□ 0.29
ARHGEF40-207ENST00000556399 MYO3AQ8NEV4 1616 aa16.87■□□□□ 0.29
ARHGEF40-207ENST00000556399 PDE8AO60658 829 aa16.87■□□□□ 0.29
ARHGEF40-207ENST00000556399 RBM5P52756 815 aaKnown RBP eCLIP16.87■□□□□ 0.29
ARHGEF40-207ENST00000556399 GOLGA5Q8TBA6 731 aa16.87■□□□□ 0.29
ARHGEF40-207ENST00000556399 PDE6AP16499 860 aa16.87■□□□□ 0.29
ARHGEF40-207ENST00000556399 TCIRG1Q13488 830 aa16.87■□□□□ 0.29
ARHGEF40-207ENST00000556399 C8orf74Q6P047 294 aa16.87■□□□□ 0.29
ARHGEF40-207ENST00000556399 IFNL3Q8IZI9 196 aa16.87■□□□□ 0.29
ARHGEF40-207ENST00000556399 PPM1EQ8WY54 764 aa16.87■□□□□ 0.29
ARHGEF40-207ENST00000556399 SLFNL1Q499Z3 407 aa16.86■□□□□ 0.29
ARHGEF40-207ENST00000556399 EPHA10Q5JZY3 1008 aa16.86■□□□□ 0.29
ARHGEF40-207ENST00000556399 FMR1NBQ8N0W7 255 aaPredicted RBP16.86■□□□□ 0.29
ARHGEF40-207ENST00000556399 ANKRD7Q92527 254 aa16.86■□□□□ 0.29
ARHGEF40-207ENST00000556399 NUP58Q9BVL2 599 aa16.86■□□□□ 0.29
ARHGEF40-207ENST00000556399 OSBPL5Q9H0X9 879 aaPredicted RBP16.86■□□□□ 0.29
ARHGEF40-207ENST00000556399 DHX40Q8IX18 779 aaKnown RBP16.86■□□□□ 0.29
ARHGEF40-207ENST00000556399 ALDH8A1Q9H2A2 487 aaPredicted RBP16.86■□□□□ 0.29
ARHGEF40-207ENST00000556399 MORC2Q9Y6X9 1032 aaPredicted RBP16.86■□□□□ 0.29
ARHGEF40-207ENST00000556399 PARD6BQ9BYG5 372 aa16.86■□□□□ 0.29
ARHGEF40-207ENST00000556399 KCNJ18B7U540 433 aa16.86■□□□□ 0.29
ARHGEF40-207ENST00000556399 NDUFAB1O14561 156 aa16.86■□□□□ 0.29
ARHGEF40-207ENST00000556399 KCNJ12Q14500 433 aa16.86■□□□□ 0.29
ARHGEF40-207ENST00000556399 KRT79Q5XKE5 535 aa16.86■□□□□ 0.29
ARHGEF40-207ENST00000556399 OR8K1Q8NGG5 319 aa16.86■□□□□ 0.29
ARHGEF40-207ENST00000556399 AK9Q5TCS8 1911 aa16.86■□□□□ 0.29
ARHGEF40-207ENST00000556399 A2ML1A8K2U0 1454 aa16.86■□□□□ 0.29
ARHGEF40-207ENST00000556399 ZC3H13Q5T200 1668 aaKnown RBP16.85■□□□□ 0.29
ARHGEF40-207ENST00000556399 MED23Q9ULK4 1368 aa16.85■□□□□ 0.29
ARHGEF40-207ENST00000556399 NUTM2BA6NNL0 878 aaPredicted RBP16.85■□□□□ 0.29
ARHGEF40-207ENST00000556399 NUTM2EB1AL46 878 aaPredicted RBP16.85■□□□□ 0.29
ARHGEF40-207ENST00000556399 IGKV5-2P06315 115 aa16.85■□□□□ 0.29
ARHGEF40-207ENST00000556399 CASP14P31944 242 aa16.85■□□□□ 0.29
ARHGEF40-207ENST00000556399 LETM2Q2VYF4 491 aa16.85■□□□□ 0.29
ARHGEF40-207ENST00000556399 GJB4Q9NTQ9 266 aa16.85■□□□□ 0.29
ARHGEF40-207ENST00000556399 MORC3Q14149 939 aa16.85■□□□□ 0.29
ARHGEF40-207ENST00000556399 CCDC121Q6ZUS5 278 aa16.85■□□□□ 0.29
ARHGEF40-207ENST00000556399 SND1Q7KZF4 910 aaKnown RBP eCLIP16.85■□□□□ 0.29
ARHGEF40-207ENST00000556399 ARFGAP2Q8N6H7 521 aa16.85■□□□□ 0.29
ARHGEF40-207ENST00000556399 FANCBQ8NB91 859 aa16.85■□□□□ 0.29
ARHGEF40-207ENST00000556399 AIFM3Q96NN9 605 aa16.85■□□□□ 0.29
ARHGEF40-207ENST00000556399 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.85■□□□□ 0.29
ARHGEF40-207ENST00000556399 ZNF710Q8N1W2 664 aa16.85■□□□□ 0.29
ARHGEF40-207ENST00000556399 PSMB7Q99436 277 aa16.85■□□□□ 0.29
ARHGEF40-207ENST00000556399 TAOK3Q9H2K8 898 aa16.85■□□□□ 0.29
ARHGEF40-207ENST00000556399 MAN1B1Q9UKM7 699 aa16.85■□□□□ 0.29
ARHGEF40-207ENST00000556399 USP42Q9H9J4 1324 aaKnown RBP16.85■□□□□ 0.29
ARHGEF40-207ENST00000556399 ADGRB1O14514 1584 aa16.84■□□□□ 0.29
ARHGEF40-207ENST00000556399 PPP1R2P41236 205 aa16.84■□□□□ 0.29
ARHGEF40-207ENST00000556399 TNNC1P63316 161 aa16.84■□□□□ 0.29
ARHGEF40-207ENST00000556399 IRX3P78415 501 aaPredicted RBP16.84■□□□□ 0.29
ARHGEF40-207ENST00000556399 SLC35F6Q8N357 371 aa16.84■□□□□ 0.29
ARHGEF40-207ENST00000556399 GRAMD1CQ8IYS0 662 aa16.84■□□□□ 0.29
ARHGEF40-207ENST00000556399 CRACR2BQ8N4Y2 399 aaPredicted RBP16.84■□□□□ 0.29
ARHGEF40-207ENST00000556399 CIAO1O76071 339 aa16.84■□□□□ 0.29
ARHGEF40-207ENST00000556399 ERCC5P28715 1186 aaPredicted RBP16.84■□□□□ 0.29
ARHGEF40-207ENST00000556399 SSR1P43307 286 aaKnown RBP16.84■□□□□ 0.29
ARHGEF40-207ENST00000556399 KIAA0753Q2KHM9 967 aa16.84■□□□□ 0.29
ARHGEF40-207ENST00000556399 CSRNP2Q9H175 543 aa16.84■□□□□ 0.29
ARHGEF40-207ENST00000556399 GNA11P29992 359 aa16.84■□□□□ 0.29
ARHGEF40-207ENST00000556399 RBL2Q08999 1139 aa16.84■□□□□ 0.29
ARHGEF40-207ENST00000556399 RPGRIP1Q96KN7 1286 aa16.84■□□□□ 0.29
ARHGEF40-207ENST00000556399 INO80Q9ULG1 1556 aaPredicted RBP16.83■□□□□ 0.29
ARHGEF40-207ENST00000556399 GOLGA6L10A0A0M3HER8 536 aa16.83■□□□□ 0.29
ARHGEF40-207ENST00000556399 ATP6V1AP38606 617 aa16.83■□□□□ 0.29
ARHGEF40-207ENST00000556399 SV2BQ7L1I2 683 aa16.83■□□□□ 0.29
ARHGEF40-207ENST00000556399 SMARCC2Q8TAQ2 1214 aa16.83■□□□□ 0.29
ARHGEF40-207ENST00000556399 CCDC151A5D8V7 595 aa16.83■□□□□ 0.28
ARHGEF40-207ENST00000556399 GSTO1P78417 241 aa16.83■□□□□ 0.28
ARHGEF40-207ENST00000556399 IQCB1Q15051 598 aa16.83■□□□□ 0.28
ARHGEF40-207ENST00000556399 ARHGEF25Q86VW2 580 aa16.83■□□□□ 0.28
ARHGEF40-207ENST00000556399 GPIHBP1Q8IV16 184 aa16.83■□□□□ 0.28
ARHGEF40-207ENST00000556399 SLF2Q8IX21 1173 aa16.83■□□□□ 0.28
ARHGEF40-207ENST00000556399 RRP36Q96EU6 259 aaKnown RBP16.83■□□□□ 0.28
ARHGEF40-207ENST00000556399 PUS7LQ9H0K6 701 aaKnown RBP16.83■□□□□ 0.28
ARHGEF40-207ENST00000556399 SAMSN1Q9NSI8 373 aaKnown RBP16.83■□□□□ 0.28
ARHGEF40-207ENST00000556399 NEXMIFQ5QGS0 1516 aa16.83■□□□□ 0.28
ARHGEF40-207ENST00000556399 CTIFO43310 598 aaKnown RBP16.83■□□□□ 0.28
ARHGEF40-207ENST00000556399 ZSCAN20P17040 1043 aaPredicted RBP16.83■□□□□ 0.28
ARHGEF40-207ENST00000556399 PPARAQ07869 468 aa16.83■□□□□ 0.28
ARHGEF40-207ENST00000556399 B4GALNT4Q76KP1 1039 aa16.83■□□□□ 0.28
ARHGEF40-207ENST00000556399 DNAJC10Q8IXB1 793 aa16.83■□□□□ 0.28
ARHGEF40-207ENST00000556399 FAM71BQ8TC56 605 aa16.83■□□□□ 0.28
ARHGEF40-207ENST00000556399 CAMSAP1Q5T5Y3 1602 aa16.83■□□□□ 0.28
ARHGEF40-207ENST00000556399 GSTTP1A0A1W2PQM5 241 aa16.82■□□□□ 0.28
ARHGEF40-207ENST00000556399 SOWAHDA6NJG2 315 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms