RNA–Protein interactions for RNA: ENST00000556296.1

APEX1-213, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 4

Gene APEX1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-213ENST00000556296 DBNDD2Q9BQY9 259 aa15.44■□□□□ 0.06
APEX1-213ENST00000556296 LNPKQ9C0E8 428 aa15.44■□□□□ 0.06
APEX1-213ENST00000556296 CCDC8Q9H0W5 538 aaPredicted RBP15.44■□□□□ 0.06
APEX1-213ENST00000556296 PI4KBQ9UBF8 816 aa15.44■□□□□ 0.06
APEX1-213ENST00000556296 GABRQQ9UN88 632 aa15.44■□□□□ 0.06
APEX1-213ENST00000556296 INHAP05111 366 aa15.43■□□□□ 0.06
APEX1-213ENST00000556296 TTC39AQ5SRH9 613 aa15.43■□□□□ 0.06
APEX1-213ENST00000556296 NAA16Q6N069 864 aaPredicted RBP15.43■□□□□ 0.06
APEX1-213ENST00000556296 CHRDL2Q6WN34 429 aa15.43■□□□□ 0.06
APEX1-213ENST00000556296 TBC1D9Q6ZT07 1266 aa15.43■□□□□ 0.06
APEX1-213ENST00000556296 UNC93B1Q9H1C4 597 aa15.43■□□□□ 0.06
APEX1-213ENST00000556296 TMOD4Q9NZQ9 345 aa15.43■□□□□ 0.06
APEX1-213ENST00000556296 DBNLQ9UJU6 430 aaKnown RBP15.43■□□□□ 0.06
APEX1-213ENST00000556296 COL2A1P02458 1487 aaPredicted RBP15.43■□□□□ 0.06
APEX1-213ENST00000556296 EVI5O60447 810 aa15.42■□□□□ 0.06
APEX1-213ENST00000556296 CAP2P40123 477 aa15.42■□□□□ 0.06
APEX1-213ENST00000556296 GPATCH3Q96I76 525 aa15.42■□□□□ 0.06
APEX1-213ENST00000556296 GINM1Q9NU53 330 aa15.42■□□□□ 0.06
APEX1-213ENST00000556296 FOCADQ5VW36 1801 aa15.42■□□□□ 0.06
APEX1-213ENST00000556296 ATAD5Q96QE3 1844 aa15.42■□□□□ 0.06
APEX1-213ENST00000556296 MGAMO43451 1857 aa15.42■□□□□ 0.06
APEX1-213ENST00000556296 SIPA1L1O43166 1804 aa15.41■□□□□ 0.06
APEX1-213ENST00000556296 ASNSP08243 561 aa15.41■□□□□ 0.06
APEX1-213ENST00000556296 SLURP2P0DP57 97 aa15.41■□□□□ 0.06
APEX1-213ENST00000556296 IRX3P78415 501 aaPredicted RBP15.41■□□□□ 0.06
APEX1-213ENST00000556296 CERS3Q8IU89 383 aa15.41■□□□□ 0.06
APEX1-213ENST00000556296 FOXP4Q8IVH2 680 aaPredicted RBP15.41■□□□□ 0.06
APEX1-213ENST00000556296 CRACR2BQ8N4Y2 399 aaPredicted RBP15.41■□□□□ 0.06
APEX1-213ENST00000556296 ZNF512BQ96KM6 892 aaPredicted RBP15.41■□□□□ 0.06
APEX1-213ENST00000556296 DEFB118Q96PH6 123 aa15.41■□□□□ 0.06
APEX1-213ENST00000556296 TLR7Q9NYK1 1049 aaKnown RBP15.41■□□□□ 0.06
APEX1-213ENST00000556296 HLA-DOAP06340 250 aa15.4■□□□□ 0.06
APEX1-213ENST00000556296 ELNP15502 786 aa15.4■□□□□ 0.06
APEX1-213ENST00000556296 HMGCS2P54868 508 aa15.4■□□□□ 0.06
APEX1-213ENST00000556296 TREML2Q5T2D2 321 aa15.4■□□□□ 0.06
APEX1-213ENST00000556296 UBE2Q1Q7Z7E8 422 aa15.4■□□□□ 0.06
APEX1-213ENST00000556296 CCAR1Q8IX12 1150 aaKnown RBP15.4■□□□□ 0.06
APEX1-213ENST00000556296 ECHDC1Q9NTX5 307 aa15.4■□□□□ 0.06
APEX1-213ENST00000556296 C19orf81C9J6K1 198 aa15.39■□□□□ 0.05
APEX1-213ENST00000556296 HMGCRP04035 888 aa15.39■□□□□ 0.05
APEX1-213ENST00000556296 MX1P20591 662 aa15.39■□□□□ 0.05
APEX1-213ENST00000556296 SH3D19Q5HYK7 790 aa15.39■□□□□ 0.05
APEX1-213ENST00000556296 NECAB2Q7Z6G3 386 aa15.39■□□□□ 0.05
APEX1-213ENST00000556296 SH3RF3Q8TEJ3 882 aaPredicted RBP15.39■□□□□ 0.05
APEX1-213ENST00000556296 GTF3C2Q8WUA4 911 aaPredicted RBP15.39■□□□□ 0.05
APEX1-213ENST00000556296 WDR18Q9BV38 432 aa15.39■□□□□ 0.05
APEX1-213ENST00000556296 AATFQ9NY61 560 aaKnown RBP eCLIP15.39■□□□□ 0.05
APEX1-213ENST00000556296 TTC41PQ6P2S7 1318 aa15.39■□□□□ 0.05
APEX1-213ENST00000556296 DOCK3Q8IZD9 2030 aa15.38■□□□□ 0.05
APEX1-213ENST00000556296 A0A1W2PPC1 479 aa15.38■□□□□ 0.05
APEX1-213ENST00000556296 FAM196BA6NMK8 535 aa15.38■□□□□ 0.05
APEX1-213ENST00000556296 CYP2E1P05181 493 aaPredicted RBP15.38■□□□□ 0.05
APEX1-213ENST00000556296 BACE1P56817 501 aa15.38■□□□□ 0.05
APEX1-213ENST00000556296 PPP4CP60510 307 aa15.38■□□□□ 0.05
APEX1-213ENST00000556296 CCDC84Q86UT8 332 aaPredicted RBP15.38■□□□□ 0.05
APEX1-213ENST00000556296 TRMT44Q8IYL2 757 aaKnown RBP15.38■□□□□ 0.05
APEX1-213ENST00000556296 ANKLE1Q8NAG6 615 aa15.38■□□□□ 0.05
APEX1-213ENST00000556296 TGFBRAP1Q8WUH2 860 aa15.38■□□□□ 0.05
APEX1-213ENST00000556296 ASCC2Q9H1I8 757 aaPredicted RBP15.38■□□□□ 0.05
APEX1-213ENST00000556296 HMX1Q9NP08 348 aaPredicted RBP15.38■□□□□ 0.05
APEX1-213ENST00000556296 PAK6Q9NQU5 681 aaPredicted RBP15.38■□□□□ 0.05
APEX1-213ENST00000556296 SNRKQ9NRH2 765 aa15.38■□□□□ 0.05
APEX1-213ENST00000556296 RBM27Q9P2N5 1060 aaKnown RBP15.38■□□□□ 0.05
APEX1-213ENST00000556296 ERC2O15083 957 aa15.37■□□□□ 0.05
APEX1-213ENST00000556296 TMED8Q6PL24 325 aaPredicted RBP15.37■□□□□ 0.05
APEX1-213ENST00000556296 GPRC5AQ8NFJ5 357 aa15.37■□□□□ 0.05
APEX1-213ENST00000556296 OTUD7AQ8TE49 926 aaPredicted RBP15.37■□□□□ 0.05
APEX1-213ENST00000556296 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.37■□□□□ 0.05
APEX1-213ENST00000556296 SOCS4Q8WXH5 440 aa15.37■□□□□ 0.05
APEX1-213ENST00000556296 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.37■□□□□ 0.05
APEX1-213ENST00000556296 CWC22Q9HCG8 908 aaKnown RBP15.37■□□□□ 0.05
APEX1-213ENST00000556296 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.37■□□□□ 0.05
APEX1-213ENST00000556296 SALL3Q9BXA9 1300 aa15.37■□□□□ 0.05
APEX1-213ENST00000556296 LOC285556D6RIA3 1793 aa15.36■□□□□ 0.05
APEX1-213ENST00000556296 USP17L10C9JJH3 530 aa15.36■□□□□ 0.05
APEX1-213ENST00000556296 ATP5JP18859 108 aa15.36■□□□□ 0.05
APEX1-213ENST00000556296 HOXA7P31268 230 aaPredicted RBP15.36■□□□□ 0.05
APEX1-213ENST00000556296 ZAP70P43403 619 aa15.36■□□□□ 0.05
APEX1-213ENST00000556296 MTMR2Q13614 643 aa15.36■□□□□ 0.05
APEX1-213ENST00000556296 ADGRA1Q86SQ6 560 aa15.36■□□□□ 0.05
APEX1-213ENST00000556296 MAPKAPK5Q8IW41 473 aa15.36■□□□□ 0.05
APEX1-213ENST00000556296 NUDT12Q9BQG2 462 aa15.36■□□□□ 0.05
APEX1-213ENST00000556296 CRISPLD2Q9H0B8 497 aa15.36■□□□□ 0.05
APEX1-213ENST00000556296 MORF4L1Q9UBU8 362 aa15.36■□□□□ 0.05
APEX1-213ENST00000556296 STAP2Q9UGK3 403 aa15.36■□□□□ 0.05
APEX1-213ENST00000556296 RPTORQ8N122 1335 aa15.36■□□□□ 0.05
APEX1-213ENST00000556296 MYH1P12882 1939 aa15.35■□□□□ 0.05
APEX1-213ENST00000556296 GLRX3O76003 335 aaKnown RBP15.35■□□□□ 0.05
APEX1-213ENST00000556296 PDE4AP27815 886 aa15.35■□□□□ 0.05
APEX1-213ENST00000556296 MAPK4P31152 587 aa15.35■□□□□ 0.05
APEX1-213ENST00000556296 PDE1AP54750 535 aa15.35■□□□□ 0.05
APEX1-213ENST00000556296 PLEKHM2Q8IWE5 1019 aa15.35■□□□□ 0.05
APEX1-213ENST00000556296 PIH1D3Q9NQM4 214 aaKnown RBP15.35■□□□□ 0.05
APEX1-213ENST00000556296 USP5P45974 858 aa15.34■□□□□ 0.05
APEX1-213ENST00000556296 RRP1BQ14684 758 aaKnown RBP15.34■□□□□ 0.05
APEX1-213ENST00000556296 USP17L2Q6R6M4 530 aa15.34■□□□□ 0.05
APEX1-213ENST00000556296 METTL16Q86W50 562 aaKnown RBP15.34■□□□□ 0.05
APEX1-213ENST00000556296 PAWRQ96IZ0 340 aaKnown RBP15.34■□□□□ 0.05
APEX1-213ENST00000556296 NBPF3Q9H094 633 aa15.34■□□□□ 0.05
APEX1-213ENST00000556296 OSBPL3Q9H4L5 887 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms