RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 POLR3EQ9NVU0 708 aa10.35□□□□□ -0.75
AL049839.2-201ENST00000553947 ECM29Q5VYK3 1845 aa10.35□□□□□ -0.75
AL049839.2-201ENST00000553947 OAS2P29728 719 aaKnown RBP10.35□□□□□ -0.75
AL049839.2-201ENST00000553947 ZNF75DP51815 510 aa10.35□□□□□ -0.75
AL049839.2-201ENST00000553947 DYNLL1P63167 89 aaKnown RBP10.35□□□□□ -0.75
AL049839.2-201ENST00000553947 UBE4AQ14139 1066 aa10.35□□□□□ -0.75
AL049839.2-201ENST00000553947 SLC10A5Q5PT55 438 aa10.35□□□□□ -0.75
AL049839.2-201ENST00000553947 LEKR1Q6ZMV7 388 aa10.35□□□□□ -0.75
AL049839.2-201ENST00000553947 BRAPQ7Z569 592 aa10.35□□□□□ -0.75
AL049839.2-201ENST00000553947 MRPS27Q92552 414 aaKnown RBP10.35□□□□□ -0.75
AL049839.2-201ENST00000553947 ZNF831Q5JPB2 1677 aa10.35□□□□□ -0.75
AL049839.2-201ENST00000553947 SPTLC2O15270 562 aa10.35□□□□□ -0.75
AL049839.2-201ENST00000553947 KINO60870 393 aaKnown RBP10.35□□□□□ -0.75
AL049839.2-201ENST00000553947 GUCY1A2P33402 732 aa10.35□□□□□ -0.75
AL049839.2-201ENST00000553947 ANO1Q5XXA6 986 aa10.35□□□□□ -0.75
AL049839.2-201ENST00000553947 VPS37DQ86XT2 251 aa10.35□□□□□ -0.75
AL049839.2-201ENST00000553947 CMTR1Q8N1G2 835 aaKnown RBP10.35□□□□□ -0.75
AL049839.2-201ENST00000553947 TDRD7Q8NHU6 1098 aaKnown RBP10.35□□□□□ -0.75
AL049839.2-201ENST00000553947 CCDC34Q96HJ3 373 aa10.35□□□□□ -0.75
AL049839.2-201ENST00000553947 RIOK1Q9BRS2 568 aaKnown RBP10.35□□□□□ -0.75
AL049839.2-201ENST00000553947 NACAP1Q9BZK3 213 aa10.35□□□□□ -0.75
AL049839.2-201ENST00000553947 NARFQ9UHQ1 456 aa10.35□□□□□ -0.75
AL049839.2-201ENST00000553947 SLC12A7Q9Y666 1083 aa10.35□□□□□ -0.75
AL049839.2-201ENST00000553947 CYP2D7A0A087X1C5 515 aa10.34□□□□□ -0.75
AL049839.2-201ENST00000553947 MINDY4BA8MYZ0 360 aa10.34□□□□□ -0.75
AL049839.2-201ENST00000553947 GNPATO15228 680 aa10.34□□□□□ -0.75
AL049839.2-201ENST00000553947 WDHD1O75717 1129 aaPredicted RBP10.34□□□□□ -0.75
AL049839.2-201ENST00000553947 YEATS4O95619 227 aa10.34□□□□□ -0.75
AL049839.2-201ENST00000553947 GNAT2P19087 354 aa10.34□□□□□ -0.75
AL049839.2-201ENST00000553947 IARSP41252 1262 aaKnown RBP10.34□□□□□ -0.75
AL049839.2-201ENST00000553947 PPARAQ07869 468 aa10.34□□□□□ -0.75
AL049839.2-201ENST00000553947 IQCB1Q15051 598 aa10.34□□□□□ -0.75
AL049839.2-201ENST00000553947 SF3A1Q15459 793 aaKnown RBP10.34□□□□□ -0.75
AL049839.2-201ENST00000553947 SLC26A6Q9BXS9 759 aa10.34□□□□□ -0.75
AL049839.2-201ENST00000553947 KRT23Q9C075 422 aa10.34□□□□□ -0.75
AL049839.2-201ENST00000553947 CNNM2Q9H8M5 875 aa10.34□□□□□ -0.75
AL049839.2-201ENST00000553947 SCN7AQ01118 1682 aa10.34□□□□□ -0.75
AL049839.2-201ENST00000553947 CACNA1SQ13698 1873 aa10.34□□□□□ -0.75
AL049839.2-201ENST00000553947 MAGEB6P1A0A0J9YX57 407 aa10.34□□□□□ -0.75
AL049839.2-201ENST00000553947 CCDC69A6NI79 296 aa10.34□□□□□ -0.75
AL049839.2-201ENST00000553947 RPS6KA4O75676 772 aa10.34□□□□□ -0.75
AL049839.2-201ENST00000553947 MARCKSP29966 332 aaPredicted RBP10.34□□□□□ -0.75
AL049839.2-201ENST00000553947 EVX2Q03828 476 aa10.34□□□□□ -0.75
AL049839.2-201ENST00000553947 ARID5BQ14865 1188 aa10.34□□□□□ -0.75
AL049839.2-201ENST00000553947 SAMD1Q6SPF0 538 aaPredicted RBP10.34□□□□□ -0.75
AL049839.2-201ENST00000553947 SYNE3Q6ZMZ3 975 aa10.34□□□□□ -0.75
AL049839.2-201ENST00000553947 CCDC91Q7Z6B0 441 aa10.34□□□□□ -0.75
AL049839.2-201ENST00000553947 GOLGA5Q8TBA6 731 aa10.34□□□□□ -0.75
AL049839.2-201ENST00000553947 A0A1W2PQ27 194 aa10.33□□□□□ -0.76
AL049839.2-201ENST00000553947 A0A1W2PQ64 194 aa10.33□□□□□ -0.76
AL049839.2-201ENST00000553947 A0A1W2PQD8 194 aa10.33□□□□□ -0.76
AL049839.2-201ENST00000553947 UBAP1LF5GYI3 381 aa10.33□□□□□ -0.76
AL049839.2-201ENST00000553947 GOLGA6L19H0YKK7 550 aa10.33□□□□□ -0.76
AL049839.2-201ENST00000553947 CDKL5O76039 1030 aa10.33□□□□□ -0.76
AL049839.2-201ENST00000553947 H2AFXP16104 143 aaPredicted RBP10.33□□□□□ -0.76
AL049839.2-201ENST00000553947 CCDC82Q8N4S0 544 aa10.33□□□□□ -0.76
AL049839.2-201ENST00000553947 MNS1Q8NEH6 495 aa10.33□□□□□ -0.76
AL049839.2-201ENST00000553947 KCNG4Q8TDN1 519 aa10.33□□□□□ -0.76
AL049839.2-201ENST00000553947 FBXW7Q969H0 707 aa10.33□□□□□ -0.76
AL049839.2-201ENST00000553947 SETDB2Q96T68 719 aa10.33□□□□□ -0.76
AL049839.2-201ENST00000553947 TFCP2L1Q9NZI6 479 aa10.33□□□□□ -0.76
AL049839.2-201ENST00000553947 MROH7-TTC4A0A0A0MT08 1334 aa10.33□□□□□ -0.76
AL049839.2-201ENST00000553947 CTAGE5O15320 804 aa10.33□□□□□ -0.76
AL049839.2-201ENST00000553947 SEC31AO94979 1220 aaKnown RBP10.33□□□□□ -0.76
AL049839.2-201ENST00000553947 RPS8P62241 208 aaKnown RBP10.33□□□□□ -0.76
AL049839.2-201ENST00000553947 CCDC144BQ3MJ40 725 aa10.33□□□□□ -0.76
AL049839.2-201ENST00000553947 CAVIN4Q5BKX8 364 aa10.33□□□□□ -0.76
AL049839.2-201ENST00000553947 NBPF5PQ86XG9 351 aaPredicted RBP10.33□□□□□ -0.76
AL049839.2-201ENST00000553947 FNBP4Q8N3X1 1017 aaPredicted RBP10.33□□□□□ -0.76
AL049839.2-201ENST00000553947 GNL3LQ9NVN8 582 aaKnown RBP10.33□□□□□ -0.76
AL049839.2-201ENST00000553947 BTAF1O14981 1849 aa10.33□□□□□ -0.76
AL049839.2-201ENST00000553947 WTAPQ15007 396 aa10.32□□□□□ -0.76
AL049839.2-201ENST00000553947 CPLX2Q6PUV4 134 aaKnown RBP10.32□□□□□ -0.76
AL049839.2-201ENST00000553947 FBXO33Q7Z6M2 555 aa10.32□□□□□ -0.76
AL049839.2-201ENST00000553947 PACS2Q86VP3 889 aa10.32□□□□□ -0.76
AL049839.2-201ENST00000553947 TXNRD3Q86VQ6 643 aa10.32□□□□□ -0.76
AL049839.2-201ENST00000553947 HOMER1Q86YM7 354 aa10.32□□□□□ -0.76
AL049839.2-201ENST00000553947 LRRC8AQ8IWT6 810 aa10.32□□□□□ -0.76
AL049839.2-201ENST00000553947 ARHGEF1Q92888 912 aaKnown RBP10.32□□□□□ -0.76
AL049839.2-201ENST00000553947 CCNL1Q9UK58 526 aaPredicted RBP10.32□□□□□ -0.76
AL049839.2-201ENST00000553947 FMNL1O95466 1100 aaPredicted RBP10.32□□□□□ -0.76
AL049839.2-201ENST00000553947 ATP2B1P20020 1258 aa10.32□□□□□ -0.76
AL049839.2-201ENST00000553947 SMC1AQ14683 1233 aaKnown RBP10.32□□□□□ -0.76
AL049839.2-201ENST00000553947 STX1AQ16623 288 aa10.32□□□□□ -0.76
AL049839.2-201ENST00000553947 RC3H1Q5TC82 1133 aaKnown RBP10.32□□□□□ -0.76
AL049839.2-201ENST00000553947 PLA2G4DQ86XP0 818 aa10.32□□□□□ -0.76
AL049839.2-201ENST00000553947 NLRP3Q96P20 1036 aa10.32□□□□□ -0.76
AL049839.2-201ENST00000553947 CXorf56Q9H5V9 222 aa10.32□□□□□ -0.76
AL049839.2-201ENST00000553947 USP21Q9UK80 565 aa10.32□□□□□ -0.76
AL049839.2-201ENST00000553947 JAG2Q9Y219 1238 aa10.32□□□□□ -0.76
AL049839.2-201ENST00000553947 IFNAR1P17181 557 aa10.32□□□□□ -0.76
AL049839.2-201ENST00000553947 TM4SF1P30408 202 aa10.32□□□□□ -0.76
AL049839.2-201ENST00000553947 SSRP1Q08945 709 aaKnown RBP10.32□□□□□ -0.76
AL049839.2-201ENST00000553947 GNL2Q13823 731 aaKnown RBP10.32□□□□□ -0.76
AL049839.2-201ENST00000553947 SLC39A14Q15043 492 aa10.32□□□□□ -0.76
AL049839.2-201ENST00000553947 PTPAQ15257 358 aa10.32□□□□□ -0.76
AL049839.2-201ENST00000553947 MAP3K14Q99558 947 aa10.32□□□□□ -0.76
AL049839.2-201ENST00000553947 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.32□□□□□ -0.76
AL049839.2-201ENST00000553947 KCNJ14Q9UNX9 436 aa10.32□□□□□ -0.76
AL049839.2-201ENST00000553947 ANKRD65E5RJM6 399 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 175.1 ms