RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 NFKBIEO00221 500 aa22.83■■□□□ 1.24
RBFOX1-215ENST00000553186 RTN1Q16799 776 aa22.83■■□□□ 1.24
RBFOX1-215ENST00000553186 CPLX2Q6PUV4 134 aaKnown RBP22.83■■□□□ 1.24
RBFOX1-215ENST00000553186 OSBPL5Q9H0X9 879 aaPredicted RBP22.83■■□□□ 1.24
RBFOX1-215ENST00000553186 RBM5P52756 815 aaKnown RBP eCLIP22.82■■□□□ 1.24
RBFOX1-215ENST00000553186 GABPAQ06546 454 aa22.82■■□□□ 1.24
RBFOX1-215ENST00000553186 TROAPQ12815 778 aa22.82■■□□□ 1.24
RBFOX1-215ENST00000553186 NIM1KQ8IY84 436 aa22.82■■□□□ 1.24
RBFOX1-215ENST00000553186 PSME4Q14997 1843 aa22.82■■□□□ 1.24
RBFOX1-215ENST00000553186 SKOR2Q2VWA4 1001 aaPredicted RBP22.82■■□□□ 1.24
RBFOX1-215ENST00000553186 TTC6Q86TZ1 520 aa22.82■■□□□ 1.24
RBFOX1-215ENST00000553186 ZNF444Q8N0Y2 327 aaPredicted RBP22.82■■□□□ 1.24
RBFOX1-215ENST00000553186 PHKBQ93100 1093 aa22.82■■□□□ 1.24
RBFOX1-215ENST00000553186 TCP11L1Q9NUJ3 509 aa22.82■■□□□ 1.24
RBFOX1-215ENST00000553186 IFNAR1P17181 557 aa22.81■■□□□ 1.24
RBFOX1-215ENST00000553186 DNM1Q05193 864 aaKnown RBP22.81■■□□□ 1.24
RBFOX1-215ENST00000553186 RESTQ13127 1097 aa22.81■■□□□ 1.24
RBFOX1-215ENST00000553186 NUP133Q8WUM0 1156 aa22.81■■□□□ 1.24
RBFOX1-215ENST00000553186 ANKS1AQ92625 1134 aa22.81■■□□□ 1.24
RBFOX1-215ENST00000553186 IDI2Q9BXS1 227 aa22.81■■□□□ 1.24
RBFOX1-215ENST00000553186 BCS1LQ9Y276 419 aa22.81■■□□□ 1.24
RBFOX1-215ENST00000553186 CNPY2Q9Y2B0 182 aa22.81■■□□□ 1.24
RBFOX1-215ENST00000553186 MYH1P12882 1939 aa22.81■■□□□ 1.24
RBFOX1-215ENST00000553186 FOSBP53539 338 aa22.8■■□□□ 1.24
RBFOX1-215ENST00000553186 PPP2R5BQ15173 497 aa22.8■■□□□ 1.24
RBFOX1-215ENST00000553186 CATIPQ7Z7H3 387 aa22.8■■□□□ 1.24
RBFOX1-215ENST00000553186 DGKHQ86XP1 1220 aa22.8■■□□□ 1.24
RBFOX1-215ENST00000553186 GDPD2Q9HCC8 539 aa22.8■■□□□ 1.24
RBFOX1-215ENST00000553186 CCDC196A0A1B0GTZ2 297 aa22.8■■□□□ 1.24
RBFOX1-215ENST00000553186 TSPY3P0CV98 308 aa22.8■■□□□ 1.24
RBFOX1-215ENST00000553186 TSPY8P0CW00 308 aa22.8■■□□□ 1.24
RBFOX1-215ENST00000553186 CFAP100Q494V2 611 aa22.8■■□□□ 1.24
RBFOX1-215ENST00000553186 TMEM87AQ8NBN3 555 aa22.8■■□□□ 1.24
RBFOX1-215ENST00000553186 FER1L6Q2WGJ9 1857 aa22.8■■□□□ 1.24
RBFOX1-215ENST00000553186 DDAH1O94760 285 aa22.79■■□□□ 1.24
RBFOX1-215ENST00000553186 CACNB3P54284 484 aa22.79■■□□□ 1.24
RBFOX1-215ENST00000553186 FAM173BQ6P4H8 233 aa22.79■■□□□ 1.24
RBFOX1-215ENST00000553186 ZFPM1Q8IX07 1006 aa22.79■■□□□ 1.24
RBFOX1-215ENST00000553186 FBXO18Q8NFZ0 1043 aa22.79■■□□□ 1.24
RBFOX1-215ENST00000553186 NLGN2Q8NFZ4 835 aa22.79■■□□□ 1.24
RBFOX1-215ENST00000553186 FAM198AQ9UFP1 575 aa22.79■■□□□ 1.24
RBFOX1-215ENST00000553186 NPM3O75607 178 aaKnown RBP22.79■■□□□ 1.24
RBFOX1-215ENST00000553186 NBPF11Q86T75 865 aa22.79■■□□□ 1.24
RBFOX1-215ENST00000553186 PRMT6Q96LA8 375 aaPredicted RBP22.79■■□□□ 1.24
RBFOX1-215ENST00000553186 ZSCAN16Q9H4T2 348 aaPredicted RBP22.79■■□□□ 1.24
RBFOX1-215ENST00000553186 ZBTB12Q9Y330 459 aaPredicted RBP22.79■■□□□ 1.24
RBFOX1-215ENST00000553186 STK36Q9NRP7 1315 aa22.78■■□□□ 1.24
RBFOX1-215ENST00000553186 FMNL1O95466 1100 aaPredicted RBP22.78■■□□□ 1.24
RBFOX1-215ENST00000553186 CXCL9Q07325 125 aa22.78■■□□□ 1.24
RBFOX1-215ENST00000553186 USP48Q86UV5 1035 aa22.78■■□□□ 1.24
RBFOX1-215ENST00000553186 RGS22Q8NE09 1264 aa22.78■■□□□ 1.24
RBFOX1-215ENST00000553186 C8orf76Q96K31 380 aa22.78■■□□□ 1.24
RBFOX1-215ENST00000553186 CALM1P0DP23 149 aa22.77■■□□□ 1.24
RBFOX1-215ENST00000553186 CALM2P0DP24 149 aa22.77■■□□□ 1.24
RBFOX1-215ENST00000553186 CALM3P0DP25 149 aa22.77■■□□□ 1.24
RBFOX1-215ENST00000553186 GUCY1B3Q02153 619 aa22.77■■□□□ 1.24
RBFOX1-215ENST00000553186 KLHL40Q2TBA0 621 aa22.77■■□□□ 1.24
RBFOX1-215ENST00000553186 CCDC178Q5BJE1 867 aa22.77■■□□□ 1.24
RBFOX1-215ENST00000553186 NEDD1Q8NHV4 660 aa22.77■■□□□ 1.24
RBFOX1-215ENST00000553186 AIFM3Q96NN9 605 aa22.77■■□□□ 1.24
RBFOX1-215ENST00000553186 GJB4Q9NTQ9 266 aa22.77■■□□□ 1.24
RBFOX1-215ENST00000553186 SERPINB13Q9UIV8 391 aa22.77■■□□□ 1.24
RBFOX1-215ENST00000553186 OTUD7BQ6GQQ9 843 aa22.77■■□□□ 1.24
RBFOX1-215ENST00000553186 CRACR2BQ8N4Y2 399 aaPredicted RBP22.77■■□□□ 1.24
RBFOX1-215ENST00000553186 TDRD3Q9H7E2 651 aaKnown RBP22.77■■□□□ 1.24
RBFOX1-215ENST00000553186 DDX49Q9Y6V7 483 aaKnown RBP22.77■■□□□ 1.24
RBFOX1-215ENST00000553186 UBE2Q2LH0YL09 131 aa22.76■■□□□ 1.23
RBFOX1-215ENST00000553186 SSRP1Q08945 709 aaKnown RBP22.76■■□□□ 1.23
RBFOX1-215ENST00000553186 CMTR1Q8N1G2 835 aaKnown RBP22.76■■□□□ 1.23
RBFOX1-215ENST00000553186 ALG1Q9BT22 464 aa22.76■■□□□ 1.23
RBFOX1-215ENST00000553186 SLC26A6Q9BXS9 759 aa22.76■■□□□ 1.23
RBFOX1-215ENST00000553186 ECM29Q5VYK3 1845 aa22.76■■□□□ 1.23
RBFOX1-215ENST00000553186 LTBP3Q9NS15 1303 aa22.76■■□□□ 1.23
RBFOX1-215ENST00000553186 FUT2Q10981 343 aa22.76■■□□□ 1.23
RBFOX1-215ENST00000553186 AGBL3Q8NEM8 1001 aa22.76■■□□□ 1.23
RBFOX1-215ENST00000553186 GPT2Q8TD30 523 aa22.76■■□□□ 1.23
RBFOX1-215ENST00000553186 SPDYE2BA6NHP3 402 aa22.75■■□□□ 1.23
RBFOX1-215ENST00000553186 SPDYE6P0CI01 402 aa22.75■■□□□ 1.23
RBFOX1-215ENST00000553186 TCP10Q12799 353 aa22.75■■□□□ 1.23
RBFOX1-215ENST00000553186 JDP2Q8WYK2 163 aa22.75■■□□□ 1.23
RBFOX1-215ENST00000553186 EHD4Q9H223 541 aa22.75■■□□□ 1.23
RBFOX1-215ENST00000553186 NCLP19338 710 aaKnown RBP22.74■■□□□ 1.23
RBFOX1-215ENST00000553186 NOVP48745 357 aa22.74■■□□□ 1.23
RBFOX1-215ENST00000553186 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.74■■□□□ 1.23
RBFOX1-215ENST00000553186 DHX36Q9H2U1 1008 aaKnown RBP22.74■■□□□ 1.23
RBFOX1-215ENST00000553186 KAT14Q9H8E8 782 aa22.74■■□□□ 1.23
RBFOX1-215ENST00000553186 SPON1Q9HCB6 807 aa22.74■■□□□ 1.23
RBFOX1-215ENST00000553186 RBM28Q9NW13 759 aaKnown RBP22.74■■□□□ 1.23
RBFOX1-215ENST00000553186 SWAP70Q9UH65 585 aa22.74■■□□□ 1.23
RBFOX1-215ENST00000553186 TCHHQ07283 1943 aa22.74■■□□□ 1.23
RBFOX1-215ENST00000553186 FIBPO43427 364 aa22.74■■□□□ 1.23
RBFOX1-215ENST00000553186 HLA-DOAP06340 250 aa22.74■■□□□ 1.23
RBFOX1-215ENST00000553186 GUCY1A2P33402 732 aa22.74■■□□□ 1.23
RBFOX1-215ENST00000553186 KRT85P78386 507 aa22.74■■□□□ 1.23
RBFOX1-215ENST00000553186 SH3BP5LQ7L8J4 393 aa22.74■■□□□ 1.23
RBFOX1-215ENST00000553186 CCDC82Q8N4S0 544 aa22.74■■□□□ 1.23
RBFOX1-215ENST00000553186 OGFOD1Q8N543 542 aa22.74■■□□□ 1.23
RBFOX1-215ENST00000553186 HDAC9Q9UKV0 1011 aa22.74■■□□□ 1.23
RBFOX1-215ENST00000553186 DDTLA6NHG4 134 aaPredicted RBP22.73■■□□□ 1.23
RBFOX1-215ENST00000553186 SHMT1P34896 483 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms