RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 SND1Q7KZF4 910 aaKnown RBP eCLIP8.93□□□□□ -0.982e-19■■■■□ 22.8
LDHA-223ENST00000545215 ANKK1Q8NFD2 765 aa8.93□□□□□ -0.98
LDHA-223ENST00000545215 FAM174AQ8TBP5 190 aa8.93□□□□□ -0.98
LDHA-223ENST00000545215 GRAPLQ8TC17 118 aaPredicted RBP8.93□□□□□ -0.98
LDHA-223ENST00000545215 ANKS1AQ92625 1134 aa8.93□□□□□ -0.98
LDHA-223ENST00000545215 TIFAQ96CG3 184 aa8.93□□□□□ -0.98
LDHA-223ENST00000545215 ZC3H12CQ9C0D7 883 aaKnown RBP8.93□□□□□ -0.98
LDHA-223ENST00000545215 PRKAG2Q9UGJ0 569 aa8.93□□□□□ -0.98
LDHA-223ENST00000545215 GPSM3Q9Y4H4 160 aa8.93□□□□□ -0.98
LDHA-223ENST00000545215 UBN2Q6ZU65 1347 aa8.93□□□□□ -0.98
LDHA-223ENST00000545215 KIF20BQ96Q89 1820 aa8.92□□□□□ -0.98
LDHA-223ENST00000545215 POTEB3A0JP26 581 aa8.92□□□□□ -0.98
LDHA-223ENST00000545215 SASH1O94885 1247 aa8.92□□□□□ -0.98
LDHA-223ENST00000545215 SKIP12755 728 aa8.92□□□□□ -0.98
LDHA-223ENST00000545215 LSM11P83369 360 aaKnown RBP eCLIP8.92□□□□□ -0.98
LDHA-223ENST00000545215 B4GALNT3Q6L9W6 998 aa8.92□□□□□ -0.98
LDHA-223ENST00000545215 POTEBQ6S5H4 581 aa8.92□□□□□ -0.98
LDHA-223ENST00000545215 OGFOD1Q8N543 542 aa8.92□□□□□ -0.98
LDHA-223ENST00000545215 PRSS33Q8NF86 280 aa8.92□□□□□ -0.98
LDHA-223ENST00000545215 STK32AQ8WU08 396 aa8.92□□□□□ -0.98
LDHA-223ENST00000545215 PCDHB3Q9Y5E6 796 aa8.92□□□□□ -0.98
LDHA-223ENST00000545215 PPP2R3BQ9Y5P8 575 aa8.92□□□□□ -0.98
LDHA-223ENST00000545215 LRRC37AA6NMS7 1700 aa8.92□□□□□ -0.98
LDHA-223ENST00000545215 LRRC37A2A6NM11 1700 aa8.91□□□□□ -0.98
LDHA-223ENST00000545215 ERVV-1B6SEH8 477 aa8.91□□□□□ -0.98
LDHA-223ENST00000545215 MMP14P50281 582 aa8.91□□□□□ -0.98
LDHA-223ENST00000545215 MSS51Q4VC12 460 aa8.91□□□□□ -0.98
LDHA-223ENST00000545215 NBPF10Q6P3W6 841 aaKnown RBP8.91□□□□□ -0.98
LDHA-223ENST00000545215 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.91□□□□□ -0.98
LDHA-223ENST00000545215 DDX46Q7L014 1031 aaKnown RBP8.91□□□□□ -0.98
LDHA-223ENST00000545215 TBC1D16Q8TBP0 767 aa8.91□□□□□ -0.98
LDHA-223ENST00000545215 ZBED3Q96IU2 234 aaPredicted RBP8.91□□□□□ -0.98
LDHA-223ENST00000545215 RNPC3Q96LT9 517 aaKnown RBP8.91□□□□□ -0.98
LDHA-223ENST00000545215 TESK2Q96S53 571 aa8.91□□□□□ -0.98
LDHA-223ENST00000545215 OCSTAMPQ9BR26 566 aa8.91□□□□□ -0.98
LDHA-223ENST00000545215 NOVA2Q9UNW9 492 aaKnown RBP8.91□□□□□ -0.98
LDHA-223ENST00000545215 ZNF318Q5VUA4 2279 aa8.91□□□□□ -0.98
LDHA-223ENST00000545215 CHD9Q3L8U1 2897 aa8.91□□□□□ -0.98
LDHA-223ENST00000545215 ANKRD11Q6UB99 2663 aaPredicted RBP8.9□□□□□ -0.98
LDHA-223ENST00000545215 FAM196BA6NMK8 535 aa8.9□□□□□ -0.98
LDHA-223ENST00000545215 DXOO77932 396 aaKnown RBP8.9□□□□□ -0.98
LDHA-223ENST00000545215 CTHP32929 405 aa8.9□□□□□ -0.98
LDHA-223ENST00000545215 GPSM2P81274 684 aa8.9□□□□□ -0.98
LDHA-223ENST00000545215 CCDC27Q2M243 656 aa8.9□□□□□ -0.98
LDHA-223ENST00000545215 NBPF12Q5TAG4 269 aaPredicted RBP8.9□□□□□ -0.98
LDHA-223ENST00000545215 PDXDC2PQ6P474 469 aa8.9□□□□□ -0.98
LDHA-223ENST00000545215 HERVK_113Q902F9 699 aa8.9□□□□□ -0.98
LDHA-223ENST00000545215 GPKOWQ92917 476 aaPredicted RBP eCLIP8.9□□□□□ -0.985e-7■■■■□ 22.3
LDHA-223ENST00000545215 BADQ92934 168 aa8.9□□□□□ -0.98
LDHA-223ENST00000545215 EVA1BQ9NVM1 165 aa8.9□□□□□ -0.98
LDHA-223ENST00000545215 CEP126Q9P2H0 1117 aa8.9□□□□□ -0.98
LDHA-223ENST00000545215 TSR3Q9UJK0 312 aaKnown RBP8.9□□□□□ -0.98
LDHA-223ENST00000545215 PSME4Q14997 1843 aa8.9□□□□□ -0.98
LDHA-223ENST00000545215 MGAMO43451 1857 aa8.9□□□□□ -0.98
LDHA-223ENST00000545215 TRANK1O15050 2925 aa8.9□□□□□ -0.99
LDHA-223ENST00000545215 CCNYL3P0C7X3 344 aa8.89□□□□□ -0.99
LDHA-223ENST00000545215 BCRP11274 1271 aa8.89□□□□□ -0.99
LDHA-223ENST00000545215 GPTP24298 496 aa8.89□□□□□ -0.99
LDHA-223ENST00000545215 PPP1R42Q7Z4L9 355 aa8.89□□□□□ -0.99
LDHA-223ENST00000545215 ZNF34Q8IZ26 560 aa8.89□□□□□ -0.99
LDHA-223ENST00000545215 DEPDC4Q8N2C3 294 aa8.89□□□□□ -0.99
LDHA-223ENST00000545215 PHTF2Q8N3S3 785 aa8.89□□□□□ -0.99
LDHA-223ENST00000545215 ZNF428Q96B54 188 aa8.89□□□□□ -0.99
LDHA-223ENST00000545215 MFSD14AQ96MC6 490 aa8.89□□□□□ -0.99
LDHA-223ENST00000545215 HS3ST6Q96QI5 342 aa8.89□□□□□ -0.99
LDHA-223ENST00000545215 COG5Q9UP83 839 aa8.89□□□□□ -0.99
LDHA-223ENST00000545215 ANKRD36CQ5JPF3 1778 aa8.88□□□□□ -0.99
LDHA-223ENST00000545215 MCCD1P59942 119 aaPredicted RBP8.88□□□□□ -0.99
LDHA-223ENST00000545215 PTK2Q05397 1052 aa8.88□□□□□ -0.99
LDHA-223ENST00000545215 CRTC2Q53ET0 693 aaPredicted RBP8.88□□□□□ -0.99
LDHA-223ENST00000545215 SULT6B1Q6IMI4 303 aa8.88□□□□□ -0.99
LDHA-223ENST00000545215 PHLDB3Q6NSJ2 640 aa8.88□□□□□ -0.99
LDHA-223ENST00000545215 HFE2Q6ZVN8 426 aa8.88□□□□□ -0.99
LDHA-223ENST00000545215 FAM160A2Q8N612 972 aaPredicted RBP8.88□□□□□ -0.99
LDHA-223ENST00000545215 ARMC2Q8NEN0 867 aa8.88□□□□□ -0.99
LDHA-223ENST00000545215 ZNF592Q92610 1267 aa8.88□□□□□ -0.99
LDHA-223ENST00000545215 RALYQ9UKM9 306 aaKnown RBP8.88□□□□□ -0.99
LDHA-223ENST00000545215 NUP98P52948 1817 aa8.88□□□□□ -0.99
LDHA-223ENST00000545215 ATRNL1Q5VV63 1379 aa8.88□□□□□ -0.99
LDHA-223ENST00000545215 OTOFQ9HC10 1997 aa8.88□□□□□ -0.99
LDHA-223ENST00000545215 MAST2Q6P0Q8 1798 aa8.88□□□□□ -0.99
LDHA-223ENST00000545215 USP17L15C9J2P7 530 aa8.87□□□□□ -0.99
LDHA-223ENST00000545215 USP17L10C9JJH3 530 aa8.87□□□□□ -0.99
LDHA-223ENST00000545215 USP17L13C9JLJ4 530 aa8.87□□□□□ -0.99
LDHA-223ENST00000545215 USP17L12C9JPN9 530 aa8.87□□□□□ -0.99
LDHA-223ENST00000545215 USP17L11C9JVI0 530 aa8.87□□□□□ -0.99
LDHA-223ENST00000545215 USP17L21D6R901 530 aa8.87□□□□□ -0.99
LDHA-223ENST00000545215 USP17L18D6R9N7 530 aa8.87□□□□□ -0.99
LDHA-223ENST00000545215 USP17L22D6RA61 530 aa8.87□□□□□ -0.99
LDHA-223ENST00000545215 USP17L17D6RBQ6 530 aa8.87□□□□□ -0.99
LDHA-223ENST00000545215 USP17L19D6RCP7 530 aa8.87□□□□□ -0.99
LDHA-223ENST00000545215 USP17L20D6RJB6 530 aa8.87□□□□□ -0.99
LDHA-223ENST00000545215 HMGCRP04035 888 aa8.87□□□□□ -0.99
LDHA-223ENST00000545215 MMP16P51512 607 aa8.87□□□□□ -0.99
LDHA-223ENST00000545215 USP17L24Q0WX57 530 aa8.87□□□□□ -0.99
LDHA-223ENST00000545215 KCNH2Q12809 1159 aa8.87□□□□□ -0.99
LDHA-223ENST00000545215 TCF15Q12870 199 aa8.87□□□□□ -0.99
LDHA-223ENST00000545215 SNAPC2Q13487 334 aa8.87□□□□□ -0.99
LDHA-223ENST00000545215 ANKRD23Q86SG2 305 aa8.87□□□□□ -0.99
LDHA-223ENST00000545215 PRRX2Q99811 253 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms