RNA–Protein interactions for RNA: ENST00000543449.1

NPIPB4-217, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 685 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-217ENST00000543449 MBD4O95243 580 aa12.37□□□□□ -0.43
NPIPB4-217ENST00000543449 GNAT2P19087 354 aa12.37□□□□□ -0.43
NPIPB4-217ENST00000543449 MX1P20591 662 aa12.37□□□□□ -0.43
NPIPB4-217ENST00000543449 GCLCP48506 637 aaPredicted RBP12.37□□□□□ -0.43
NPIPB4-217ENST00000543449 USP14P54578 494 aa12.37□□□□□ -0.43
NPIPB4-217ENST00000543449 BACE1P56817 501 aa12.37□□□□□ -0.43
NPIPB4-217ENST00000543449 CERKLQ49MI3 558 aaPredicted RBP12.37□□□□□ -0.43
NPIPB4-217ENST00000543449 GIMAP6Q6P9H5 292 aa12.37□□□□□ -0.43
NPIPB4-217ENST00000543449 DNAJC18Q9H819 358 aa12.37□□□□□ -0.43
NPIPB4-217ENST00000543449 DCP1AQ9NPI6 582 aaPredicted RBP12.37□□□□□ -0.43
NPIPB4-217ENST00000543449 ZBTB21Q9ULJ3 1066 aa12.37□□□□□ -0.43
NPIPB4-217ENST00000543449 FCGRTP55899 365 aa12.36□□□□□ -0.43
NPIPB4-217ENST00000543449 ABCB5Q2M3G0 1257 aa12.36□□□□□ -0.43
NPIPB4-217ENST00000543449 ANKRD45Q5TZF3 282 aa12.36□□□□□ -0.43
NPIPB4-217ENST00000543449 USP17L2Q6R6M4 530 aa12.36□□□□□ -0.43
NPIPB4-217ENST00000543449 LCORLQ8N3X6 602 aa12.36□□□□□ -0.43
NPIPB4-217ENST00000543449 APPBP2Q92624 585 aa12.36□□□□□ -0.43
NPIPB4-217ENST00000543449 EDC3Q96F86 508 aaKnown RBP12.36□□□□□ -0.43
NPIPB4-217ENST00000543449 CCDC17Q96LX7 622 aa12.36□□□□□ -0.43
NPIPB4-217ENST00000543449 ADGRA2Q96PE1 1338 aa12.36□□□□□ -0.43
NPIPB4-217ENST00000543449 RNF113AO15541 343 aaKnown RBP12.35□□□□□ -0.43
NPIPB4-217ENST00000543449 BCRP11274 1271 aa12.35□□□□□ -0.43
NPIPB4-217ENST00000543449 HOXA7P31268 230 aaPredicted RBP12.35□□□□□ -0.43
NPIPB4-217ENST00000543449 HMGCS2P54868 508 aa12.35□□□□□ -0.43
NPIPB4-217ENST00000543449 IRX3P78415 501 aaPredicted RBP12.35□□□□□ -0.43
NPIPB4-217ENST00000543449 FAM110CQ1W6H9 321 aa12.35□□□□□ -0.43
NPIPB4-217ENST00000543449 ARMT1Q9H993 441 aa12.35□□□□□ -0.43
NPIPB4-217ENST00000543449 ZNF287Q9HBT7 754 aa12.35□□□□□ -0.43
NPIPB4-217ENST00000543449 ARPP21Q9UBL0 812 aaPredicted RBP12.35□□□□□ -0.43
NPIPB4-217ENST00000543449 CPA4Q9UI42 421 aa12.35□□□□□ -0.43
NPIPB4-217ENST00000543449 SLC4A4Q9Y6R1 1079 aa12.35□□□□□ -0.43
NPIPB4-217ENST00000543449 MYO5AQ9Y4I1 1855 aaKnown RBP12.35□□□□□ -0.43
NPIPB4-217ENST00000543449 GDF11O95390 407 aa12.34□□□□□ -0.43
NPIPB4-217ENST00000543449 FMNL1O95466 1100 aaPredicted RBP12.34□□□□□ -0.43
NPIPB4-217ENST00000543449 GH2P01242 217 aa12.34□□□□□ -0.43
NPIPB4-217ENST00000543449 SLURP2P0DP57 97 aa12.34□□□□□ -0.43
NPIPB4-217ENST00000543449 CYP2C8P10632 490 aa12.34□□□□□ -0.43
NPIPB4-217ENST00000543449 PSMC4P43686 418 aa12.34□□□□□ -0.43
NPIPB4-217ENST00000543449 PLCD1P51178 756 aa12.34□□□□□ -0.43
NPIPB4-217ENST00000543449 MLLT1Q03111 559 aaPredicted RBP12.34□□□□□ -0.43
NPIPB4-217ENST00000543449 GABPAQ06546 454 aa12.34□□□□□ -0.43
NPIPB4-217ENST00000543449 MTMR2Q13614 643 aa12.34□□□□□ -0.43
NPIPB4-217ENST00000543449 RRP1BQ14684 758 aaKnown RBP12.34□□□□□ -0.43
NPIPB4-217ENST00000543449 SDR42E1Q8WUS8 393 aa12.34□□□□□ -0.43
NPIPB4-217ENST00000543449 ARMC5Q96C12 935 aa12.34□□□□□ -0.43
NPIPB4-217ENST00000543449 FEZ1Q99689 392 aa12.34□□□□□ -0.43
NPIPB4-217ENST00000543449 NACAP1Q9BZK3 213 aa12.34□□□□□ -0.43
NPIPB4-217ENST00000543449 SH2D4AQ9H788 454 aa12.34□□□□□ -0.43
NPIPB4-217ENST00000543449 MYH1P12882 1939 aa12.34□□□□□ -0.43
NPIPB4-217ENST00000543449 CDK5RAP2Q96SN8 1893 aa12.34□□□□□ -0.43
NPIPB4-217ENST00000543449 CAPN2P17655 700 aa12.33□□□□□ -0.44
NPIPB4-217ENST00000543449 HOXD11P31277 338 aaPredicted RBP12.33□□□□□ -0.44
NPIPB4-217ENST00000543449 SHMT1P34896 483 aa12.33□□□□□ -0.44
NPIPB4-217ENST00000543449 RAB3GAP1Q15042 981 aa12.33□□□□□ -0.44
NPIPB4-217ENST00000543449 SLC9C1Q4G0N8 1177 aa12.33□□□□□ -0.44
NPIPB4-217ENST00000543449 C12orf60Q5U649 245 aa12.33□□□□□ -0.44
NPIPB4-217ENST00000543449 TMEM179Q6ZVK1 233 aa12.33□□□□□ -0.44
NPIPB4-217ENST00000543449 C12orf42Q96LP6 360 aa12.33□□□□□ -0.44
NPIPB4-217ENST00000543449 FSD1Q9BTV5 496 aa12.33□□□□□ -0.44
NPIPB4-217ENST00000543449 TMEM106CQ9BVX2 250 aa12.33□□□□□ -0.44
NPIPB4-217ENST00000543449 KIAA1683Q9H0B3 1180 aa12.33□□□□□ -0.44
NPIPB4-217ENST00000543449 STAP2Q9UGK3 403 aa12.33□□□□□ -0.44
NPIPB4-217ENST00000543449 SRRDQ9UH36 339 aa12.33□□□□□ -0.44
NPIPB4-217ENST00000543449 PHIPQ8WWQ0 1821 aa12.32□□□□□ -0.44
NPIPB4-217ENST00000543449 SLC4A8Q2Y0W8 1093 aa12.32□□□□□ -0.44
NPIPB4-217ENST00000543449 SBK1Q52WX2 424 aa12.32□□□□□ -0.44
NPIPB4-217ENST00000543449 TREML2Q5T2D2 321 aa12.32□□□□□ -0.44
NPIPB4-217ENST00000543449 CCDC84Q86UT8 332 aaPredicted RBP12.32□□□□□ -0.44
NPIPB4-217ENST00000543449 PI4K2BQ8TCG2 481 aa12.32□□□□□ -0.44
NPIPB4-217ENST00000543449 RAET1EQ8TD07 263 aa12.32□□□□□ -0.44
NPIPB4-217ENST00000543449 COA7Q96BR5 231 aa12.32□□□□□ -0.44
NPIPB4-217ENST00000543449 EVI5LQ96CN4 794 aa12.32□□□□□ -0.44
NPIPB4-217ENST00000543449 TRIM47Q96LD4 638 aa12.32□□□□□ -0.44
NPIPB4-217ENST00000543449 STRBPQ96SI9 672 aaKnown RBP12.32□□□□□ -0.44
NPIPB4-217ENST00000543449 PUS7LQ9H0K6 701 aaKnown RBP12.32□□□□□ -0.44
NPIPB4-217ENST00000543449 ASCC2Q9H1I8 757 aaPredicted RBP12.32□□□□□ -0.44
NPIPB4-217ENST00000543449 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.32□□□□□ -0.44
NPIPB4-217ENST00000543449 SIPA1L1O43166 1804 aa12.32□□□□□ -0.44
NPIPB4-217ENST00000543449 ATAD5Q96QE3 1844 aa12.32□□□□□ -0.44
NPIPB4-217ENST00000543449 NAV1Q8NEY1 1877 aa12.31□□□□□ -0.44
NPIPB4-217ENST00000543449 LOC285556D6RIA3 1793 aa12.31□□□□□ -0.44
NPIPB4-217ENST00000543449 USP17L15C9J2P7 530 aa12.31□□□□□ -0.44
NPIPB4-217ENST00000543449 USP17L13C9JLJ4 530 aa12.31□□□□□ -0.44
NPIPB4-217ENST00000543449 USP17L12C9JPN9 530 aa12.31□□□□□ -0.44
NPIPB4-217ENST00000543449 USP17L11C9JVI0 530 aa12.31□□□□□ -0.44
NPIPB4-217ENST00000543449 USP17L21D6R901 530 aa12.31□□□□□ -0.44
NPIPB4-217ENST00000543449 USP17L18D6R9N7 530 aa12.31□□□□□ -0.44
NPIPB4-217ENST00000543449 USP17L22D6RA61 530 aa12.31□□□□□ -0.44
NPIPB4-217ENST00000543449 USP17L17D6RBQ6 530 aa12.31□□□□□ -0.44
NPIPB4-217ENST00000543449 USP17L19D6RCP7 530 aa12.31□□□□□ -0.44
NPIPB4-217ENST00000543449 USP17L20D6RJB6 530 aa12.31□□□□□ -0.44
NPIPB4-217ENST00000543449 MPHOSPH10O00566 681 aaKnown RBP12.31□□□□□ -0.44
NPIPB4-217ENST00000543449 TNPO2O14787 897 aaKnown RBP12.31□□□□□ -0.44
NPIPB4-217ENST00000543449 SLC3A2P08195 630 aaKnown RBP12.31□□□□□ -0.44
NPIPB4-217ENST00000543449 USP17L24Q0WX57 530 aa12.31□□□□□ -0.44
NPIPB4-217ENST00000543449 C16orf86Q6ZW13 317 aa12.31□□□□□ -0.44
NPIPB4-217ENST00000543449 SMC5Q8IY18 1101 aa12.31□□□□□ -0.44
NPIPB4-217ENST00000543449 ARHGEF10LQ9HCE6 1279 aa12.31□□□□□ -0.44
NPIPB4-217ENST00000543449 MORF4L1Q9UBU8 362 aa12.31□□□□□ -0.44
NPIPB4-217ENST00000543449 PTCH2Q9Y6C5 1203 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms