RNA–Protein interactions for RNA: ENST00000532460.5

CSRP1-216, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSRP1, Length 1,469 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-216ENST00000532460 GTF3C6Q969F1 213 aa13.14□□□□□ -0.31
CSRP1-216ENST00000532460 LLPHQ9BRT6 129 aaKnown RBP13.14□□□□□ -0.31
CSRP1-216ENST00000532460 MANSC4A6NHS7 340 aaPredicted RBP13.13□□□□□ -0.31
CSRP1-216ENST00000532460 STX6O43752 255 aa13.13□□□□□ -0.31
CSRP1-216ENST00000532460 TRAK2O60296 914 aa13.13□□□□□ -0.31
CSRP1-216ENST00000532460 SYT1P21579 422 aa13.13□□□□□ -0.31
CSRP1-216ENST00000532460 GJB2P29033 226 aa13.13□□□□□ -0.31
CSRP1-216ENST00000532460 FGD1P98174 961 aa13.13□□□□□ -0.31
CSRP1-216ENST00000532460 TRDNQ13061 729 aa13.13□□□□□ -0.31
CSRP1-216ENST00000532460 MKRN3Q13064 507 aaKnown RBP13.13□□□□□ -0.31
CSRP1-216ENST00000532460 NOM1Q5C9Z4 860 aaKnown RBP13.13□□□□□ -0.31
CSRP1-216ENST00000532460 NAA16Q6N069 864 aaPredicted RBP13.13□□□□□ -0.31
CSRP1-216ENST00000532460 GIMAP6Q6P9H5 292 aa13.13□□□□□ -0.31
CSRP1-216ENST00000532460 RALYLQ86SE5 291 aaKnown RBP13.13□□□□□ -0.31
CSRP1-216ENST00000532460 NECAB1Q8N987 351 aa13.13□□□□□ -0.31
CSRP1-216ENST00000532460 BRF1Q92994 677 aa13.13□□□□□ -0.31
CSRP1-216ENST00000532460 NSUN4Q96CB9 384 aaKnown RBP13.13□□□□□ -0.31
CSRP1-216ENST00000532460 CLMNQ96JQ2 1002 aa13.13□□□□□ -0.31
CSRP1-216ENST00000532460 RIOK1Q9BRS2 568 aaKnown RBP13.13□□□□□ -0.31
CSRP1-216ENST00000532460 CFHR5Q9BXR6 569 aa13.13□□□□□ -0.31
CSRP1-216ENST00000532460 MCOLN1Q9GZU1 580 aa13.13□□□□□ -0.31
CSRP1-216ENST00000532460 NAPBQ9H115 298 aa13.13□□□□□ -0.31
CSRP1-216ENST00000532460 ARMT1Q9H993 441 aa13.13□□□□□ -0.31
CSRP1-216ENST00000532460 EPB41L4AQ9HCS5 686 aaPredicted RBP13.13□□□□□ -0.31
CSRP1-216ENST00000532460 MAGEB6P1A0A0J9YX57 407 aa13.12□□□□□ -0.31
CSRP1-216ENST00000532460 TBC1D8O95759 1140 aa13.12□□□□□ -0.31
CSRP1-216ENST00000532460 LDHBP07195 334 aaKnown RBP13.12□□□□□ -0.31
CSRP1-216ENST00000532460 PRDX5P30044 214 aa13.12□□□□□ -0.31
CSRP1-216ENST00000532460 CACNB3P54284 484 aa13.12□□□□□ -0.31
CSRP1-216ENST00000532460 HAND2P61296 217 aa13.12□□□□□ -0.31
CSRP1-216ENST00000532460 GSE1Q14687 1217 aa13.12□□□□□ -0.31
CSRP1-216ENST00000532460 CDAN1Q8IWY9 1227 aa13.12□□□□□ -0.31
CSRP1-216ENST00000532460 LCORLQ8N3X6 602 aa13.12□□□□□ -0.31
CSRP1-216ENST00000532460 WNK4Q96J92 1243 aa13.12□□□□□ -0.31
CSRP1-216ENST00000532460 NBPF3Q9H094 633 aa13.12□□□□□ -0.31
CSRP1-216ENST00000532460 TMOD2Q9NZR1 351 aa13.12□□□□□ -0.31
CSRP1-216ENST00000532460 SLC4A4Q9Y6R1 1079 aa13.12□□□□□ -0.31
CSRP1-216ENST00000532460 PRC1O43663 620 aa13.11□□□□□ -0.31
CSRP1-216ENST00000532460 ALDH1A1P00352 501 aa13.11□□□□□ -0.31
CSRP1-216ENST00000532460 ZSCAN22P10073 491 aaPredicted RBP13.11□□□□□ -0.31
CSRP1-216ENST00000532460 MAP3K9P80192 1104 aa13.11□□□□□ -0.31
CSRP1-216ENST00000532460 DGKZQ13574 1117 aa13.11□□□□□ -0.31
CSRP1-216ENST00000532460 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.11□□□□□ -0.31
CSRP1-216ENST00000532460 MTA3Q9BTC8 594 aa13.11□□□□□ -0.31
CSRP1-216ENST00000532460 CNNM2Q9H8M5 875 aa13.11□□□□□ -0.31
CSRP1-216ENST00000532460 ANAPC4Q9UJX5 808 aa13.11□□□□□ -0.31
CSRP1-216ENST00000532460 DAGLAQ9Y4D2 1042 aa13.11□□□□□ -0.31
CSRP1-216ENST00000532460 ATP6V1DQ9Y5K8 247 aa13.11□□□□□ -0.31
CSRP1-216ENST00000532460 ECM29Q5VYK3 1845 aa13.11□□□□□ -0.31
CSRP1-216ENST00000532460 MECOMQ03112 1051 aa13.1□□□□□ -0.31
CSRP1-216ENST00000532460 DIXDC1Q155Q3 683 aa13.1□□□□□ -0.31
CSRP1-216ENST00000532460 IFNL1Q8IU54 200 aa13.1□□□□□ -0.31
CSRP1-216ENST00000532460 TBC1D10CQ8IV04 446 aa13.1□□□□□ -0.31
CSRP1-216ENST00000532460 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.1□□□□□ -0.31
CSRP1-216ENST00000532460 SMARCC2Q8TAQ2 1214 aa13.1□□□□□ -0.31
CSRP1-216ENST00000532460 ZNF384Q8TF68 577 aa13.1□□□□□ -0.31
CSRP1-216ENST00000532460 STAG1Q8WVM7 1258 aa13.1□□□□□ -0.31
CSRP1-216ENST00000532460 HOOK2Q96ED9 719 aa13.1□□□□□ -0.31
CSRP1-216ENST00000532460 FAM163AQ96GL9 167 aaPredicted RBP13.1□□□□□ -0.31
CSRP1-216ENST00000532460 TMEM87BQ96K49 555 aa13.1□□□□□ -0.31
CSRP1-216ENST00000532460 TESPA1A2RU30 521 aaPredicted RBP13.1□□□□□ -0.31
CSRP1-216ENST00000532460 PRKAB2O43741 272 aa13.1□□□□□ -0.31
CSRP1-216ENST00000532460 PCP11498 1178 aaKnown RBP13.1□□□□□ -0.31
CSRP1-216ENST00000532460 PDIA3P30101 505 aaKnown RBP13.1□□□□□ -0.31
CSRP1-216ENST00000532460 GJA5P36382 358 aa13.1□□□□□ -0.31
CSRP1-216ENST00000532460 ANTXR2P58335 489 aa13.1□□□□□ -0.31
CSRP1-216ENST00000532460 HMGN5P82970 282 aaKnown RBP13.1□□□□□ -0.31
CSRP1-216ENST00000532460 SCRN1Q12765 414 aa13.1□□□□□ -0.31
CSRP1-216ENST00000532460 AKNAD1Q5T1N1 836 aa13.1□□□□□ -0.31
CSRP1-216ENST00000532460 CDC42EP5Q6NZY7 148 aa13.1□□□□□ -0.31
CSRP1-216ENST00000532460 ADGRA1Q86SQ6 560 aa13.1□□□□□ -0.31
CSRP1-216ENST00000532460 MIGA1Q8NAN2 632 aa13.1□□□□□ -0.31
CSRP1-216ENST00000532460 ZNF296Q8WUU4 475 aaPredicted RBP13.1□□□□□ -0.31
CSRP1-216ENST00000532460 FAM151AQ8WW52 585 aa13.1□□□□□ -0.31
CSRP1-216ENST00000532460 LRRC2Q9BYS8 371 aa13.1□□□□□ -0.31
CSRP1-216ENST00000532460 KRT23Q9C075 422 aa13.1□□□□□ -0.31
CSRP1-216ENST00000532460 RNF41Q9H4P4 317 aaPredicted RBP13.1□□□□□ -0.31
CSRP1-216ENST00000532460 LMBRD1Q9NUN5 540 aa13.1□□□□□ -0.31
CSRP1-216ENST00000532460 MTMR6Q9Y217 621 aa13.1□□□□□ -0.31
CSRP1-216ENST00000532460 GPR25O00155 361 aa13.09□□□□□ -0.31
CSRP1-216ENST00000532460 TDO2P48775 406 aa13.09□□□□□ -0.31
CSRP1-216ENST00000532460 APOBRQ0VD83 1088 aa13.09□□□□□ -0.31
CSRP1-216ENST00000532460 KLHL40Q2TBA0 621 aa13.09□□□□□ -0.31
CSRP1-216ENST00000532460 LARP1BQ659C4 914 aaKnown RBP13.09□□□□□ -0.31
CSRP1-216ENST00000532460 MCTP1Q6DN14 999 aa13.09□□□□□ -0.31
CSRP1-216ENST00000532460 CERS3Q8IU89 383 aa13.09□□□□□ -0.31
CSRP1-216ENST00000532460 OPTNQ96CV9 577 aa13.09□□□□□ -0.31
CSRP1-216ENST00000532460 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.09□□□□□ -0.31
CSRP1-216ENST00000532460 KIF3AQ9Y496 699 aa13.09□□□□□ -0.31
CSRP1-216ENST00000532460 CASP8AP2Q9UKL3 1982 aa13.09□□□□□ -0.31
CSRP1-216ENST00000532460 DOCK2Q92608 1830 aa13.08□□□□□ -0.32
CSRP1-216ENST00000532460 CCDC85CA6NKD9 419 aa13.08□□□□□ -0.32
CSRP1-216ENST00000532460 DHX16O60231 1041 aaKnown RBP13.08□□□□□ -0.32
CSRP1-216ENST00000532460 F13A1P00488 732 aa13.08□□□□□ -0.32
CSRP1-216ENST00000532460 NT5C2P49902 561 aa13.08□□□□□ -0.32
CSRP1-216ENST00000532460 GSTO1P78417 241 aa13.08□□□□□ -0.32
CSRP1-216ENST00000532460 STK3Q13188 491 aa13.08□□□□□ -0.32
CSRP1-216ENST00000532460 VGLL4Q14135 290 aa13.08□□□□□ -0.32
CSRP1-216ENST00000532460 CTU1Q7Z7A3 348 aaKnown RBP13.08□□□□□ -0.32
CSRP1-216ENST00000532460 SLF2Q8IX21 1173 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms