RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 SMIM5Q71RC9 77 aa14.25□□□□□ -0.13
CHD7-211ENST00000532149 ZNF467Q7Z7K2 595 aaPredicted RBP14.25□□□□□ -0.13
CHD7-211ENST00000532149 TTC6Q86TZ1 520 aa14.25□□□□□ -0.13
CHD7-211ENST00000532149 FERMT3Q86UX7 667 aa14.25□□□□□ -0.13
CHD7-211ENST00000532149 ZNF654Q8IZM8 581 aa14.25□□□□□ -0.13
CHD7-211ENST00000532149 SLC16A10Q8TF71 515 aa14.25□□□□□ -0.13
CHD7-211ENST00000532149 LZTS2Q9BRK4 669 aa14.25□□□□□ -0.13
CHD7-211ENST00000532149 OCEL1Q9H607 264 aa14.25□□□□□ -0.13
CHD7-211ENST00000532149 NCOA5Q9HCD5 579 aaKnown RBP14.25□□□□□ -0.13
CHD7-211ENST00000532149 STK32BQ9NY57 414 aa14.25□□□□□ -0.13
CHD7-211ENST00000532149 AATFQ9NY61 560 aaKnown RBP eCLIP14.25□□□□□ -0.13
CHD7-211ENST00000532149 MYH15Q9Y2K3 1946 aa14.25□□□□□ -0.13
CHD7-211ENST00000532149 GAKO14976 1311 aa14.24□□□□□ -0.13
CHD7-211ENST00000532149 BMP15O95972 392 aa14.24□□□□□ -0.13
CHD7-211ENST00000532149 U2AF2P26368 475 aaKnown RBP eCLIP14.24□□□□□ -0.13
CHD7-211ENST00000532149 HDLBPQ00341 1268 aaKnown RBP14.24□□□□□ -0.13
CHD7-211ENST00000532149 RRP12Q5JTH9 1297 aaKnown RBP14.24□□□□□ -0.13
CHD7-211ENST00000532149 ADALQ6DHV7 355 aa14.24□□□□□ -0.13
CHD7-211ENST00000532149 DPP8Q6V1X1 898 aaPredicted RBP14.24□□□□□ -0.13
CHD7-211ENST00000532149 SDR42E1Q8WUS8 393 aa14.24□□□□□ -0.13
CHD7-211ENST00000532149 ALG1Q9BT22 464 aa14.24□□□□□ -0.13
CHD7-211ENST00000532149 VPS33BQ9H267 617 aa14.24□□□□□ -0.13
CHD7-211ENST00000532149 FOXP1Q9H334 677 aaPredicted RBP14.24□□□□□ -0.13
CHD7-211ENST00000532149 MKRN1Q9UHC7 482 aaKnown RBP14.24□□□□□ -0.13
CHD7-211ENST00000532149 CEP131Q9UPN4 1083 aa14.24□□□□□ -0.13
CHD7-211ENST00000532149 LTBP1Q14766 1721 aa14.24□□□□□ -0.13
CHD7-211ENST00000532149 TNS1Q9HBL0 1735 aaKnown RBP14.24□□□□□ -0.13
CHD7-211ENST00000532149 TNKSO95271 1327 aa14.23□□□□□ -0.13
CHD7-211ENST00000532149 RANBP6O60518 1105 aaKnown RBP14.23□□□□□ -0.13
CHD7-211ENST00000532149 PPP6R2O75170 966 aa14.23□□□□□ -0.13
CHD7-211ENST00000532149 GADD45BO75293 160 aaPredicted RBP14.23□□□□□ -0.13
CHD7-211ENST00000532149 GNL2Q13823 731 aaKnown RBP14.23□□□□□ -0.13
CHD7-211ENST00000532149 MAP3K11Q16584 847 aa14.23□□□□□ -0.13
CHD7-211ENST00000532149 ZNF827Q17R98 1081 aa14.23□□□□□ -0.13
CHD7-211ENST00000532149 CCDC73Q6ZRK6 1079 aa14.23□□□□□ -0.13
CHD7-211ENST00000532149 TXNRD3Q86VQ6 643 aa14.23□□□□□ -0.13
CHD7-211ENST00000532149 MICU3Q86XE3 530 aa14.23□□□□□ -0.13
CHD7-211ENST00000532149 CRACR2BQ8N4Y2 399 aaPredicted RBP14.23□□□□□ -0.13
CHD7-211ENST00000532149 CTCFLQ8NI51 663 aaPredicted RBP14.23□□□□□ -0.13
CHD7-211ENST00000532149 ZNF384Q8TF68 577 aa14.23□□□□□ -0.13
CHD7-211ENST00000532149 PPP1R9BQ96SB3 815 aa14.23□□□□□ -0.13
CHD7-211ENST00000532149 NUP62CLQ9H1M0 184 aa14.23□□□□□ -0.13
CHD7-211ENST00000532149 BRMS1Q9HCU9 246 aa14.23□□□□□ -0.13
CHD7-211ENST00000532149 MCM9Q9NXL9 1143 aa14.23□□□□□ -0.13
CHD7-211ENST00000532149 DLEC1Q9Y238 1755 aa14.23□□□□□ -0.13
CHD7-211ENST00000532149 MYO3BQ8WXR4 1341 aa14.22□□□□□ -0.13
CHD7-211ENST00000532149 SYCE3A1L190 88 aa14.22□□□□□ -0.13
CHD7-211ENST00000532149 G3V3G9 751 aa14.22□□□□□ -0.13
CHD7-211ENST00000532149 PRPF3O43395 683 aaKnown RBP14.22□□□□□ -0.13
CHD7-211ENST00000532149 MMP10P09238 476 aa14.22□□□□□ -0.13
CHD7-211ENST00000532149 KLRK1P26718 216 aa14.22□□□□□ -0.13
CHD7-211ENST00000532149 SMARCA1P28370 1054 aa14.22□□□□□ -0.13
CHD7-211ENST00000532149 ADD1P35611 737 aaKnown RBP14.22□□□□□ -0.13
CHD7-211ENST00000532149 DYNLL1P63167 89 aaKnown RBP14.22□□□□□ -0.13
CHD7-211ENST00000532149 SF3B2Q13435 895 aaKnown RBP14.22□□□□□ -0.13
CHD7-211ENST00000532149 SF3A1Q15459 793 aaKnown RBP14.22□□□□□ -0.13
CHD7-211ENST00000532149 SLC15A2Q16348 729 aa14.22□□□□□ -0.13
CHD7-211ENST00000532149 RILPL1Q5EBL4 403 aa14.22□□□□□ -0.13
CHD7-211ENST00000532149 MFSD14BQ5SR56 506 aa14.22□□□□□ -0.13
CHD7-211ENST00000532149 MYSM1Q5VVJ2 828 aa14.22□□□□□ -0.13
CHD7-211ENST00000532149 HHIPL2Q6UWX4 724 aa14.22□□□□□ -0.13
CHD7-211ENST00000532149 RBM43Q6ZSC3 357 aaKnown RBP14.22□□□□□ -0.13
CHD7-211ENST00000532149 ZNF444Q8N0Y2 327 aaPredicted RBP14.22□□□□□ -0.13
CHD7-211ENST00000532149 CCDC24Q8N4L8 307 aa14.22□□□□□ -0.13
CHD7-211ENST00000532149 TRIM44Q96DX7 344 aaPredicted RBP14.22□□□□□ -0.13
CHD7-211ENST00000532149 MKNK2Q9HBH9 465 aa14.22□□□□□ -0.13
CHD7-211ENST00000532149 GDPD2Q9HCC8 539 aa14.22□□□□□ -0.13
CHD7-211ENST00000532149 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.22□□□□□ -0.13
CHD7-211ENST00000532149 POLLQ9UGP5 575 aa14.22□□□□□ -0.13
CHD7-211ENST00000532149 TSPY2A6NKD2 308 aa14.21□□□□□ -0.13
CHD7-211ENST00000532149 MMP14P50281 582 aa14.21□□□□□ -0.13
CHD7-211ENST00000532149 KIF23Q02241 960 aaPredicted RBP14.21□□□□□ -0.13
CHD7-211ENST00000532149 FOXD4L6Q3SYB3 417 aaPredicted RBP14.21□□□□□ -0.13
CHD7-211ENST00000532149 GALNT17Q6IS24 598 aa14.21□□□□□ -0.13
CHD7-211ENST00000532149 FOXD4L3Q6VB84 417 aaPredicted RBP14.21□□□□□ -0.13
CHD7-211ENST00000532149 GAS2L3Q86XJ1 694 aa14.21□□□□□ -0.13
CHD7-211ENST00000532149 CCDC125Q86Z20 511 aa14.21□□□□□ -0.13
CHD7-211ENST00000532149 ENAHQ8N8S7 591 aaPredicted RBP14.21□□□□□ -0.13
CHD7-211ENST00000532149 BICD2Q8TD16 824 aa14.21□□□□□ -0.13
CHD7-211ENST00000532149 CCDC34Q96HJ3 373 aa14.21□□□□□ -0.13
CHD7-211ENST00000532149 RTFDC1Q9BY42 306 aaPredicted RBP14.21□□□□□ -0.13
CHD7-211ENST00000532149 FAM217BQ9NTX9 383 aaPredicted RBP14.21□□□□□ -0.13
CHD7-211ENST00000532149 MYH2Q9UKX2 1941 aa14.21□□□□□ -0.14
CHD7-211ENST00000532149 ANKRD31Q8N7Z5 1873 aa14.21□□□□□ -0.14
CHD7-211ENST00000532149 POLR3DP05423 398 aaPredicted RBP14.2□□□□□ -0.14
CHD7-211ENST00000532149 CDC27P30260 824 aa14.2□□□□□ -0.14
CHD7-211ENST00000532149 BAG6P46379 1132 aa14.2□□□□□ -0.14
CHD7-211ENST00000532149 FAM160A1Q05DH4 1040 aa14.2□□□□□ -0.14
CHD7-211ENST00000532149 STK38Q15208 465 aa14.2□□□□□ -0.14
CHD7-211ENST00000532149 KRT40Q6A162 431 aa14.2□□□□□ -0.14
CHD7-211ENST00000532149 ELOA2Q8IYF1 753 aaPredicted RBP14.2□□□□□ -0.14
CHD7-211ENST00000532149 PDCD7Q8N8D1 485 aaKnown RBP14.2□□□□□ -0.14
CHD7-211ENST00000532149 LINC00301Q8NCQ3 95 aa14.2□□□□□ -0.14
CHD7-211ENST00000532149 SLC26A6Q9BXS9 759 aa14.2□□□□□ -0.14
CHD7-211ENST00000532149 TNMDQ9H2S6 317 aa14.2□□□□□ -0.14
CHD7-211ENST00000532149 CLSTN2Q9H4D0 955 aa14.2□□□□□ -0.14
CHD7-211ENST00000532149 GPHNQ9NQX3 736 aaPredicted RBP14.2□□□□□ -0.14
CHD7-211ENST00000532149 SH3GLB2Q9NR46 395 aa14.2□□□□□ -0.14
CHD7-211ENST00000532149 TFIP11Q9UBB9 837 aaKnown RBP14.2□□□□□ -0.14
CHD7-211ENST00000532149 SWAP70Q9UH65 585 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms