RNA–Protein interactions for RNA: ENST00000527025.5

CCDC90B-208, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-208ENST00000527025 MBD4O95243 580 aa10.73□□□□□ -0.69
CCDC90B-208ENST00000527025 CYP2D6P10635 497 aa10.73□□□□□ -0.69
CCDC90B-208ENST00000527025 MX1P20591 662 aa10.73□□□□□ -0.69
CCDC90B-208ENST00000527025 SREBF2Q12772 1141 aa10.73□□□□□ -0.69
CCDC90B-208ENST00000527025 PPIL2Q13356 520 aa10.73□□□□□ -0.69
CCDC90B-208ENST00000527025 DGKZQ13574 1117 aa10.73□□□□□ -0.69
CCDC90B-208ENST00000527025 UBE3CQ15386 1083 aa10.73□□□□□ -0.69
CCDC90B-208ENST00000527025 CCL15Q16663 113 aa10.73□□□□□ -0.69
CCDC90B-208ENST00000527025 SCYL3Q8IZE3 742 aa10.73□□□□□ -0.69
CCDC90B-208ENST00000527025 KBTBD3Q8NAB2 608 aa10.73□□□□□ -0.69
CCDC90B-208ENST00000527025 NOL10Q9BSC4 688 aaKnown RBP10.73□□□□□ -0.69
CCDC90B-208ENST00000527025 CFHR5Q9BXR6 569 aa10.73□□□□□ -0.69
CCDC90B-208ENST00000527025 LNPKQ9C0E8 428 aa10.73□□□□□ -0.69
CCDC90B-208ENST00000527025 RWDD1Q9H446 243 aaPredicted RBP10.73□□□□□ -0.69
CCDC90B-208ENST00000527025 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.73□□□□□ -0.69
CCDC90B-208ENST00000527025 STAP2Q9UGK3 403 aa10.73□□□□□ -0.69
CCDC90B-208ENST00000527025 KCNH4Q9UQ05 1017 aa10.73□□□□□ -0.69
CCDC90B-208ENST00000527025 TTC41PQ6P2S7 1318 aa10.73□□□□□ -0.69
CCDC90B-208ENST00000527025 NAV1Q8NEY1 1877 aa10.72□□□□□ -0.69
CCDC90B-208ENST00000527025 CYP2D7A0A087X1C5 515 aa10.72□□□□□ -0.69
CCDC90B-208ENST00000527025 BTBD19C9JJ37 291 aa10.72□□□□□ -0.69
CCDC90B-208ENST00000527025 CTNND1O60716 968 aaKnown RBP10.72□□□□□ -0.69
CCDC90B-208ENST00000527025 CAP2P40123 477 aa10.72□□□□□ -0.69
CCDC90B-208ENST00000527025 GTF2A2P52657 109 aa10.72□□□□□ -0.69
CCDC90B-208ENST00000527025 PDE1AP54750 535 aa10.72□□□□□ -0.69
CCDC90B-208ENST00000527025 INHBEP58166 350 aa10.72□□□□□ -0.69
CCDC90B-208ENST00000527025 NUCB1Q02818 461 aa10.72□□□□□ -0.69
CCDC90B-208ENST00000527025 CRHR2Q13324 411 aa10.72□□□□□ -0.69
CCDC90B-208ENST00000527025 GPAT2Q6NUI2 795 aa10.72□□□□□ -0.69
CCDC90B-208ENST00000527025 TMED8Q6PL24 325 aaPredicted RBP10.72□□□□□ -0.69
CCDC90B-208ENST00000527025 ZNF296Q8WUU4 475 aaPredicted RBP10.72□□□□□ -0.69
CCDC90B-208ENST00000527025 OSBP2Q969R2 916 aa10.72□□□□□ -0.69
CCDC90B-208ENST00000527025 SEC62Q99442 399 aaKnown RBP10.72□□□□□ -0.69
CCDC90B-208ENST00000527025 DHX36Q9H2U1 1008 aaKnown RBP10.72□□□□□ -0.69
CCDC90B-208ENST00000527025 DCP1AQ9NPI6 582 aaPredicted RBP10.72□□□□□ -0.69
CCDC90B-208ENST00000527025 AFG3L2Q9Y4W6 797 aa10.72□□□□□ -0.69
CCDC90B-208ENST00000527025 ZHX2Q9Y6X8 837 aa10.72□□□□□ -0.69
CCDC90B-208ENST00000527025 HTTP42858 3142 aa10.71□□□□□ -0.69
CCDC90B-208ENST00000527025 M0R2C6 588 aa10.71□□□□□ -0.69
CCDC90B-208ENST00000527025 GPR25O00155 361 aa10.71□□□□□ -0.69
CCDC90B-208ENST00000527025 RNF113AO15541 343 aaKnown RBP10.71□□□□□ -0.69
CCDC90B-208ENST00000527025 USP5P45974 858 aa10.71□□□□□ -0.69
CCDC90B-208ENST00000527025 TATDN1Q6P1N9 297 aa10.71□□□□□ -0.69
CCDC90B-208ENST00000527025 CHD1LQ86WJ1 897 aa10.71□□□□□ -0.69
CCDC90B-208ENST00000527025 FOXP4Q8IVH2 680 aaPredicted RBP10.71□□□□□ -0.69
CCDC90B-208ENST00000527025 PLEKHM2Q8IWE5 1019 aa10.71□□□□□ -0.69
CCDC90B-208ENST00000527025 TNS4Q8IZW8 715 aa10.71□□□□□ -0.69
CCDC90B-208ENST00000527025 STRBPQ96SI9 672 aaKnown RBP10.71□□□□□ -0.69
CCDC90B-208ENST00000527025 ZSWIM8A7E2V4 1837 aa10.7□□□□□ -0.7
CCDC90B-208ENST00000527025 GLRX3O76003 335 aaKnown RBP10.7□□□□□ -0.7
CCDC90B-208ENST00000527025 GDF11O95390 407 aa10.7□□□□□ -0.7
CCDC90B-208ENST00000527025 NEFLP07196 543 aa10.7□□□□□ -0.7
CCDC90B-208ENST00000527025 CETPP11597 493 aa10.7□□□□□ -0.7
CCDC90B-208ENST00000527025 PDE4AP27815 886 aa10.7□□□□□ -0.7
CCDC90B-208ENST00000527025 SHMT1P34896 483 aa10.7□□□□□ -0.7
CCDC90B-208ENST00000527025 GABPAQ06546 454 aa10.7□□□□□ -0.7
CCDC90B-208ENST00000527025 SNAPC2Q13487 334 aa10.7□□□□□ -0.7
CCDC90B-208ENST00000527025 DYNLL2Q96FJ2 89 aa10.7□□□□□ -0.7
CCDC90B-208ENST00000527025 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.7□□□□□ -0.7
CCDC90B-208ENST00000527025 MCM9Q9NXL9 1143 aa10.7□□□□□ -0.7
CCDC90B-208ENST00000527025 HERC5Q9UII4 1024 aaKnown RBP10.7□□□□□ -0.7
CCDC90B-208ENST00000527025 CENPFP49454 3210 aa10.69□□□□□ -0.7
CCDC90B-208ENST00000527025 A0A0G2JLL6 359 aaPredicted RBP10.69□□□□□ -0.7
CCDC90B-208ENST00000527025 TRIM75PA6NK02 468 aa10.69□□□□□ -0.7
CCDC90B-208ENST00000527025 GSG1L2A8MUP6 293 aa10.69□□□□□ -0.7
CCDC90B-208ENST00000527025 CXCL11O14625 94 aa10.69□□□□□ -0.7
CCDC90B-208ENST00000527025 FOXP2O15409 715 aa10.69□□□□□ -0.7
CCDC90B-208ENST00000527025 CHRM1P11229 460 aaPredicted RBP10.69□□□□□ -0.7
CCDC90B-208ENST00000527025 GUCY1A2P33402 732 aa10.69□□□□□ -0.7
CCDC90B-208ENST00000527025 SPP2Q13103 211 aa10.69□□□□□ -0.7
CCDC90B-208ENST00000527025 GSE1Q14687 1217 aa10.69□□□□□ -0.7
CCDC90B-208ENST00000527025 PRRT2Q7Z6L0 340 aaPredicted RBP10.69□□□□□ -0.7
CCDC90B-208ENST00000527025 SLC44A5Q8NCS7 719 aa10.69□□□□□ -0.7
CCDC90B-208ENST00000527025 GPATCH3Q96I76 525 aa10.69□□□□□ -0.7
CCDC90B-208ENST00000527025 CRNKL1Q9BZJ0 848 aaKnown RBP10.69□□□□□ -0.7
CCDC90B-208ENST00000527025 EHD4Q9H223 541 aa10.69□□□□□ -0.7
CCDC90B-208ENST00000527025 PICK1Q9NRD5 415 aa10.69□□□□□ -0.7
CCDC90B-208ENST00000527025 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.69□□□□□ -0.7
CCDC90B-208ENST00000527025 SERPINB13Q9UIV8 391 aa10.69□□□□□ -0.7
CCDC90B-208ENST00000527025 ADGRA2Q96PE1 1338 aa10.68□□□□□ -0.7
CCDC90B-208ENST00000527025 USP17L12C9JPN9 530 aa10.68□□□□□ -0.7
CCDC90B-208ENST00000527025 USP17L21D6R901 530 aa10.68□□□□□ -0.7
CCDC90B-208ENST00000527025 ERC2O15083 957 aa10.68□□□□□ -0.7
CCDC90B-208ENST00000527025 ALDH1A1P00352 501 aa10.68□□□□□ -0.7
CCDC90B-208ENST00000527025 CTGFP29279 349 aa10.68□□□□□ -0.7
CCDC90B-208ENST00000527025 NOM1Q5C9Z4 860 aaKnown RBP10.68□□□□□ -0.7
CCDC90B-208ENST00000527025 ZMYM1Q5SVZ6 1142 aa10.68□□□□□ -0.7
CCDC90B-208ENST00000527025 TREML2Q5T2D2 321 aa10.68□□□□□ -0.7
CCDC90B-208ENST00000527025 C12orf60Q5U649 245 aa10.68□□□□□ -0.7
CCDC90B-208ENST00000527025 ERICH6BQ5W0A0 696 aa10.68□□□□□ -0.7
CCDC90B-208ENST00000527025 CTR9Q6PD62 1173 aa10.68□□□□□ -0.7
CCDC90B-208ENST00000527025 ZNF467Q7Z7K2 595 aaPredicted RBP10.68□□□□□ -0.7
CCDC90B-208ENST00000527025 CERS3Q8IU89 383 aa10.68□□□□□ -0.7
CCDC90B-208ENST00000527025 CRACR2BQ8N4Y2 399 aaPredicted RBP10.68□□□□□ -0.7
CCDC90B-208ENST00000527025 APPBP2Q92624 585 aa10.68□□□□□ -0.7
CCDC90B-208ENST00000527025 MCOLN1Q9GZU1 580 aa10.68□□□□□ -0.7
CCDC90B-208ENST00000527025 EPB41L4AQ9HCS5 686 aaPredicted RBP10.68□□□□□ -0.7
CCDC90B-208ENST00000527025 ZBTB21Q9ULJ3 1066 aa10.68□□□□□ -0.7
CCDC90B-208ENST00000527025 SLC4A4Q9Y6R1 1079 aa10.68□□□□□ -0.7
CCDC90B-208ENST00000527025 LOC285556D6RIA3 1793 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms