RNA–Protein interactions for RNA: ENST00000524115.2

NKX6-3-202, Transcript of NK6 homeobox 3, humanhuman

TSL 2 BASIC

Gene NKX6-3, Length 1,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-202ENST00000524115 FSTL1Q12841 308 aa25.96■■□□□ 1.75
NKX6-3-202ENST00000524115 PPP2R5BQ15173 497 aa25.96■■□□□ 1.75
NKX6-3-202ENST00000524115 CCDC186Q7Z3E2 898 aa25.96■■□□□ 1.75
NKX6-3-202ENST00000524115 HELBQ8NG08 1087 aaPredicted RBP25.96■■□□□ 1.75
NKX6-3-202ENST00000524115 KIAA1468Q9P260 1216 aa25.96■■□□□ 1.75
NKX6-3-202ENST00000524115 CCDC88AQ3V6T2 1871 aa25.96■■□□□ 1.75
NKX6-3-202ENST00000524115 ERICH2A1L162 156 aa25.96■■□□□ 1.75
NKX6-3-202ENST00000524115 IFIT3O14879 490 aaKnown RBP25.96■■□□□ 1.75
NKX6-3-202ENST00000524115 POLR3DP05423 398 aaPredicted RBP25.96■■□□□ 1.75
NKX6-3-202ENST00000524115 SSRP1Q08945 709 aaKnown RBP25.96■■□□□ 1.75
NKX6-3-202ENST00000524115 KRT40Q6A162 431 aa25.96■■□□□ 1.75
NKX6-3-202ENST00000524115 PTGS1P23219 599 aa25.95■■□□□ 1.74
NKX6-3-202ENST00000524115 GTF2F1P35269 517 aaKnown RBP eCLIP25.95■■□□□ 1.74
NKX6-3-202ENST00000524115 SUPT20HQ8NEM7 779 aa25.95■■□□□ 1.74
NKX6-3-202ENST00000524115 L3MBTL3Q96JM7 780 aaPredicted RBP25.95■■□□□ 1.74
NKX6-3-202ENST00000524115 VPS33BQ9H267 617 aa25.95■■□□□ 1.74
NKX6-3-202ENST00000524115 NEDD4P46934 1319 aa25.94■■□□□ 1.74
NKX6-3-202ENST00000524115 PPIP5K2O43314 1243 aa25.94■■□□□ 1.74
NKX6-3-202ENST00000524115 IFNAR1P17181 557 aa25.94■■□□□ 1.74
NKX6-3-202ENST00000524115 U2AF2P26368 475 aaKnown RBP eCLIP25.94■■□□□ 1.74
NKX6-3-202ENST00000524115 NDUFA8P51970 172 aa25.94■■□□□ 1.74
NKX6-3-202ENST00000524115 RPS8P62241 208 aaKnown RBP25.94■■□□□ 1.74
NKX6-3-202ENST00000524115 OTUD7BQ6GQQ9 843 aa25.94■■□□□ 1.74
NKX6-3-202ENST00000524115 TMED8Q6PL24 325 aaPredicted RBP25.94■■□□□ 1.74
NKX6-3-202ENST00000524115 C11orf57Q6ZUT1 292 aaPredicted RBP25.94■■□□□ 1.74
NKX6-3-202ENST00000524115 SEC31BQ9NQW1 1179 aa25.94■■□□□ 1.74
NKX6-3-202ENST00000524115 FAM237AA0A1B0GTK4 181 aa25.93■■□□□ 1.74
NKX6-3-202ENST00000524115 SMTNL1A8MU46 457 aa25.93■■□□□ 1.74
NKX6-3-202ENST00000524115 GSG1L2A8MUP6 293 aa25.93■■□□□ 1.74
NKX6-3-202ENST00000524115 FMNL1O95466 1100 aaPredicted RBP25.93■■□□□ 1.74
NKX6-3-202ENST00000524115 SLC3A2P08195 630 aaKnown RBP25.93■■□□□ 1.74
NKX6-3-202ENST00000524115 TDO2P48775 406 aa25.93■■□□□ 1.74
NKX6-3-202ENST00000524115 SAFBQ15424 915 aaKnown RBP eCLIP25.93■■□□□ 1.74
NKX6-3-202ENST00000524115 AOC3Q16853 763 aa25.93■■□□□ 1.74
NKX6-3-202ENST00000524115 TRIM22Q8IYM9 498 aa25.93■■□□□ 1.74
NKX6-3-202ENST00000524115 SMC1BQ8NDV3 1235 aa25.93■■□□□ 1.74
NKX6-3-202ENST00000524115 NOL10Q9BSC4 688 aaKnown RBP25.93■■□□□ 1.74
NKX6-3-202ENST00000524115 EPB41L4AQ9HCS5 686 aaPredicted RBP25.93■■□□□ 1.74
NKX6-3-202ENST00000524115 A0A1B0GVL5 298 aa25.93■■□□□ 1.74
NKX6-3-202ENST00000524115 EIF6P56537 245 aaKnown RBP25.93■■□□□ 1.74
NKX6-3-202ENST00000524115 UBE4AQ14139 1066 aa25.93■■□□□ 1.74
NKX6-3-202ENST00000524115 NTRK3Q16288 839 aa25.93■■□□□ 1.74
NKX6-3-202ENST00000524115 VPS37DQ86XT2 251 aa25.93■■□□□ 1.74
NKX6-3-202ENST00000524115 LRP2BPQ9P2M1 347 aa25.93■■□□□ 1.74
NKX6-3-202ENST00000524115 PYCARDQ9ULZ3 195 aa25.93■■□□□ 1.74
NKX6-3-202ENST00000524115 SLC4A4Q9Y6R1 1079 aa25.93■■□□□ 1.74
NKX6-3-202ENST00000524115 DICER1Q9UPY3 1922 aaKnown RBP25.92■■□□□ 1.74
NKX6-3-202ENST00000524115 PCP11498 1178 aaKnown RBP25.92■■□□□ 1.74
NKX6-3-202ENST00000524115 CHRNDQ07001 517 aa25.92■■□□□ 1.74
NKX6-3-202ENST00000524115 AXDND1Q5T1B0 1012 aaPredicted RBP25.92■■□□□ 1.74
NKX6-3-202ENST00000524115 MICU3Q86XE3 530 aa25.92■■□□□ 1.74
NKX6-3-202ENST00000524115 NIM1KQ8IY84 436 aa25.92■■□□□ 1.74
NKX6-3-202ENST00000524115 ELOA2Q8IYF1 753 aaPredicted RBP25.92■■□□□ 1.74
NKX6-3-202ENST00000524115 ARMT1Q9H993 441 aa25.92■■□□□ 1.74
NKX6-3-202ENST00000524115 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.92■■□□□ 1.74
NKX6-3-202ENST00000524115 ZSWIM5Q9P217 1185 aa25.92■■□□□ 1.74
NKX6-3-202ENST00000524115 IQCA1LA6NCM1 817 aa25.91■■□□□ 1.74
NKX6-3-202ENST00000524115 KIF28PB7ZC32 967 aa25.91■■□□□ 1.74
NKX6-3-202ENST00000524115 ZNF202O95125 648 aa25.91■■□□□ 1.74
NKX6-3-202ENST00000524115 GSDMDP57764 484 aa25.91■■□□□ 1.74
NKX6-3-202ENST00000524115 NLRP12P59046 1061 aa25.91■■□□□ 1.74
NKX6-3-202ENST00000524115 DHX40Q8IX18 779 aaKnown RBP25.91■■□□□ 1.74
NKX6-3-202ENST00000524115 GPC2Q8N158 579 aa25.91■■□□□ 1.74
NKX6-3-202ENST00000524115 ZNF804BA4D1E1 1349 aa25.91■■□□□ 1.74
NKX6-3-202ENST00000524115 COL4A5P29400 1685 aa25.91■■□□□ 1.74
NKX6-3-202ENST00000524115 CEP350Q5VT06 3117 aa25.9■■□□□ 1.74
NKX6-3-202ENST00000524115 CUTAO60888 179 aa25.9■■□□□ 1.74
NKX6-3-202ENST00000524115 CDC27P30260 824 aa25.9■■□□□ 1.74
NKX6-3-202ENST00000524115 WTAPQ15007 396 aa25.9■■□□□ 1.74
NKX6-3-202ENST00000524115 GLIPR1L2Q4G1C9 344 aa25.9■■□□□ 1.74
NKX6-3-202ENST00000524115 ANKRD18AQ8IVF6 992 aa25.9■■□□□ 1.74
NKX6-3-202ENST00000524115 IMPACTQ9P2X3 320 aa25.9■■□□□ 1.74
NKX6-3-202ENST00000524115 ANAPC4Q9UJX5 808 aa25.9■■□□□ 1.74
NKX6-3-202ENST00000524115 WDR90Q96KV7 1748 aa25.9■■□□□ 1.74
NKX6-3-202ENST00000524115 MYO1BO43795 1136 aa25.9■■□□□ 1.74
NKX6-3-202ENST00000524115 PPFIA3O75145 1194 aa25.9■■□□□ 1.74
NKX6-3-202ENST00000524115 SEMA3EO15041 775 aa25.89■■□□□ 1.73
NKX6-3-202ENST00000524115 PFKFB1P16118 471 aa25.89■■□□□ 1.73
NKX6-3-202ENST00000524115 BCAMP50895 628 aa25.89■■□□□ 1.73
NKX6-3-202ENST00000524115 APLP1P51693 650 aa25.89■■□□□ 1.73
NKX6-3-202ENST00000524115 HOOK1Q9UJC3 728 aaKnown RBP25.89■■□□□ 1.73
NKX6-3-202ENST00000524115 GJA3Q9Y6H8 435 aa25.89■■□□□ 1.73
NKX6-3-202ENST00000524115 IGSF3O75054 1194 aa25.88■■□□□ 1.73
NKX6-3-202ENST00000524115 GPSM2P81274 684 aa25.88■■□□□ 1.73
NKX6-3-202ENST00000524115 RTN1Q16799 776 aa25.88■■□□□ 1.73
NKX6-3-202ENST00000524115 RAB11FIP4Q86YS3 637 aa25.88■■□□□ 1.73
NKX6-3-202ENST00000524115 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.88■■□□□ 1.73
NKX6-3-202ENST00000524115 TAF1DQ9H5J8 278 aaPredicted RBP25.88■■□□□ 1.73
NKX6-3-202ENST00000524115 FAM217BQ9NTX9 383 aaPredicted RBP25.88■■□□□ 1.73
NKX6-3-202ENST00000524115 MYO5AQ9Y4I1 1855 aaKnown RBP25.88■■□□□ 1.73
NKX6-3-202ENST00000524115 DEXIO95424 95 aa25.87■■□□□ 1.73
NKX6-3-202ENST00000524115 SYKP43405 635 aa25.87■■□□□ 1.73
NKX6-3-202ENST00000524115 CTDSPL2Q05D32 466 aa25.87■■□□□ 1.73
NKX6-3-202ENST00000524115 CAVIN4Q5BKX8 364 aa25.87■■□□□ 1.73
NKX6-3-202ENST00000524115 LCORLQ8N3X6 602 aa25.87■■□□□ 1.73
NKX6-3-202ENST00000524115 BSDC1Q9NW68 430 aaPredicted RBP25.87■■□□□ 1.73
NKX6-3-202ENST00000524115 DENND2AQ9ULE3 1009 aa25.87■■□□□ 1.73
NKX6-3-202ENST00000524115 ZNRF3Q9ULT6 936 aa25.87■■□□□ 1.73
NKX6-3-202ENST00000524115 HPSEQ9Y251 543 aa25.87■■□□□ 1.73
NKX6-3-202ENST00000524115 CYP7A1P22680 504 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms