RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 SDR42E1Q8WUS8 393 aa22.63■■□□□ 1.21
SPIDR-220ENST00000522900 CRNKL1Q9BZJ0 848 aaKnown RBP22.63■■□□□ 1.21
SPIDR-220ENST00000522900 ARMT1Q9H993 441 aa22.63■■□□□ 1.21
SPIDR-220ENST00000522900 SERPINB13Q9UIV8 391 aa22.63■■□□□ 1.21
SPIDR-220ENST00000522900 PRKAB2O43741 272 aa22.62■■□□□ 1.21
SPIDR-220ENST00000522900 GH2P01242 217 aa22.62■■□□□ 1.21
SPIDR-220ENST00000522900 SMCR8Q8TEV9 937 aaPredicted RBP22.62■■□□□ 1.21
SPIDR-220ENST00000522900 ZNF333Q96JL9 665 aa22.62■■□□□ 1.21
SPIDR-220ENST00000522900 EHD4Q9H223 541 aa22.62■■□□□ 1.21
SPIDR-220ENST00000522900 ECHDC1Q9NTX5 307 aa22.62■■□□□ 1.21
SPIDR-220ENST00000522900 SRRDQ9UH36 339 aa22.62■■□□□ 1.21
SPIDR-220ENST00000522900 MYCP01106 439 aaPredicted RBP22.61■■□□□ 1.21
SPIDR-220ENST00000522900 POLR3DP05423 398 aaPredicted RBP22.61■■□□□ 1.21
SPIDR-220ENST00000522900 BACE1P56817 501 aa22.61■■□□□ 1.21
SPIDR-220ENST00000522900 TSHZ3Q63HK5 1081 aa22.61■■□□□ 1.21
SPIDR-220ENST00000522900 ANKRD13CQ8N6S4 541 aa22.61■■□□□ 1.21
SPIDR-220ENST00000522900 CRBNQ96SW2 442 aa22.61■■□□□ 1.21
SPIDR-220ENST00000522900 DCP1AQ9NPI6 582 aaPredicted RBP22.61■■□□□ 1.21
SPIDR-220ENST00000522900 GINM1Q9NU53 330 aa22.61■■□□□ 1.21
SPIDR-220ENST00000522900 PTPRFP10586 1907 aa22.61■■□□□ 1.21
SPIDR-220ENST00000522900 MBD4O95243 580 aa22.6■■□□□ 1.21
SPIDR-220ENST00000522900 CYP2D6P10635 497 aa22.6■■□□□ 1.21
SPIDR-220ENST00000522900 SHMT1P34896 483 aa22.6■■□□□ 1.21
SPIDR-220ENST00000522900 PRMT2P55345 433 aa22.6■■□□□ 1.21
SPIDR-220ENST00000522900 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.6■■□□□ 1.211e-6■■□□□ 13.3
SPIDR-220ENST00000522900 ASCC2Q9H1I8 757 aaPredicted RBP22.6■■□□□ 1.21
SPIDR-220ENST00000522900 MCM9Q9NXL9 1143 aa22.6■■□□□ 1.21
SPIDR-220ENST00000522900 GABRQQ9UN88 632 aa22.6■■□□□ 1.21
SPIDR-220ENST00000522900 ATAD5Q96QE3 1844 aa22.59■■□□□ 1.21
SPIDR-220ENST00000522900 USP17L10C9JJH3 530 aa22.59■■□□□ 1.21
SPIDR-220ENST00000522900 HOXD10P28358 340 aa22.59■■□□□ 1.21
SPIDR-220ENST00000522900 FCGRTP55899 365 aa22.59■■□□□ 1.21
SPIDR-220ENST00000522900 CERKLQ49MI3 558 aaPredicted RBP22.59■■□□□ 1.21
SPIDR-220ENST00000522900 NBPF11Q86T75 865 aa22.59■■□□□ 1.21
SPIDR-220ENST00000522900 PNMA3Q9UL41 463 aa22.59■■□□□ 1.21
SPIDR-220ENST00000522900 EN2P19622 333 aaPredicted RBP22.58■■□□□ 1.21
SPIDR-220ENST00000522900 PRKCZQ05513 592 aa22.58■■□□□ 1.21
SPIDR-220ENST00000522900 GABPAQ06546 454 aa22.58■■□□□ 1.21
SPIDR-220ENST00000522900 MYPNQ86TC9 1320 aa22.57■■□□□ 1.2
SPIDR-220ENST00000522900 CENPFP49454 3210 aa22.57■■□□□ 1.2
SPIDR-220ENST00000522900 MYH1P12882 1939 aa22.57■■□□□ 1.2
SPIDR-220ENST00000522900 C19orf81C9J6K1 198 aa22.57■■□□□ 1.2
SPIDR-220ENST00000522900 PABPC4Q13310 644 aaKnown RBP eCLIP22.57■■□□□ 1.2
SPIDR-220ENST00000522900 UBE3CQ15386 1083 aa22.57■■□□□ 1.2
SPIDR-220ENST00000522900 ABCB5Q2M3G0 1257 aa22.57■■□□□ 1.2
SPIDR-220ENST00000522900 RAET1EQ8TD07 263 aa22.57■■□□□ 1.2
SPIDR-220ENST00000522900 PUS7LQ9H0K6 701 aaKnown RBP22.57■■□□□ 1.2
SPIDR-220ENST00000522900 EMILIN3Q9NT22 766 aa22.57■■□□□ 1.2
SPIDR-220ENST00000522900 TMOD4Q9NZQ9 345 aa22.57■■□□□ 1.2
SPIDR-220ENST00000522900 SMIM22K7EJ46 135 aa22.56■■□□□ 1.2
SPIDR-220ENST00000522900 PEX10O60683 326 aa22.56■■□□□ 1.2
SPIDR-220ENST00000522900 GUCY1A2P33402 732 aa22.56■■□□□ 1.2
SPIDR-220ENST00000522900 RAB3GAP1Q15042 981 aa22.56■■□□□ 1.2
SPIDR-220ENST00000522900 OTUD7AQ8TE49 926 aaPredicted RBP22.56■■□□□ 1.2
SPIDR-220ENST00000522900 DYNLL2Q96FJ2 89 aa22.56■■□□□ 1.2
SPIDR-220ENST00000522900 P2RX7Q99572 595 aaKnown RBP22.56■■□□□ 1.2
SPIDR-220ENST00000522900 HOXA7P31268 230 aaPredicted RBP22.55■■□□□ 1.2
SPIDR-220ENST00000522900 FAM110CQ1W6H9 321 aa22.55■■□□□ 1.2
SPIDR-220ENST00000522900 SLC44A5Q8NCS7 719 aa22.55■■□□□ 1.2
SPIDR-220ENST00000522900 ACER1Q8TDN7 264 aa22.55■■□□□ 1.2
SPIDR-220ENST00000522900 TMEM106CQ9BVX2 250 aa22.55■■□□□ 1.2
SPIDR-220ENST00000522900 LOC285556D6RIA3 1793 aa22.55■■□□□ 1.2
SPIDR-220ENST00000522900 CYP2D7A0A087X1C5 515 aa22.54■■□□□ 1.2
SPIDR-220ENST00000522900 GRK4P32298 578 aa22.54■■□□□ 1.2
SPIDR-220ENST00000522900 GCLCP48506 637 aaPredicted RBP22.54■■□□□ 1.2
SPIDR-220ENST00000522900 ZYXQ15942 572 aaKnown RBP22.54■■□□□ 1.2
SPIDR-220ENST00000522900 USP17L2Q6R6M4 530 aa22.54■■□□□ 1.2
SPIDR-220ENST00000522900 GPATCH3Q96I76 525 aa22.54■■□□□ 1.2
SPIDR-220ENST00000522900 ATP8A2Q9NTI2 1148 aa22.54■■□□□ 1.2
SPIDR-220ENST00000522900 TNPO2O14787 897 aaKnown RBP22.53■■□□□ 1.2
SPIDR-220ENST00000522900 FLT3LGP49771 235 aa22.53■■□□□ 1.2
SPIDR-220ENST00000522900 IRX3P78415 501 aaPredicted RBP22.53■■□□□ 1.2
SPIDR-220ENST00000522900 SEPT2Q15019 361 aa22.53■■□□□ 1.2
SPIDR-220ENST00000522900 MTFR1Q15390 333 aa22.53■■□□□ 1.2
SPIDR-220ENST00000522900 ZSCAN25Q6NSZ9 544 aa22.53■■□□□ 1.2
SPIDR-220ENST00000522900 KBTBD3Q8NAB2 608 aa22.53■■□□□ 1.2
SPIDR-220ENST00000522900 CABP5Q9NP86 173 aa22.53■■□□□ 1.2
SPIDR-220ENST00000522900 SLC4A4Q9Y6R1 1079 aa22.53■■□□□ 1.2
SPIDR-220ENST00000522900 DDX60LQ5H9U9 1706 aaKnown RBP22.53■■□□□ 1.2
SPIDR-220ENST00000522900 POTEEQ6S8J3 1075 aa22.52■■□□□ 1.2
SPIDR-220ENST00000522900 FEZ1Q99689 392 aa22.52■■□□□ 1.2
SPIDR-220ENST00000522900 USP17L12C9JPN9 530 aa22.51■■□□□ 1.19
SPIDR-220ENST00000522900 USP17L21D6R901 530 aa22.51■■□□□ 1.19
SPIDR-220ENST00000522900 HERVK_113P62684 666 aa22.51■■□□□ 1.19
SPIDR-220ENST00000522900 C12orf60Q5U649 245 aa22.51■■□□□ 1.19
SPIDR-220ENST00000522900 OSBP2Q969R2 916 aa22.51■■□□□ 1.19
SPIDR-220ENST00000522900 C12orf42Q96LP6 360 aa22.51■■□□□ 1.19
SPIDR-220ENST00000522900 STRBPQ96SI9 672 aaKnown RBP22.51■■□□□ 1.19
SPIDR-220ENST00000522900 TXNRD2Q9NNW7 524 aa22.51■■□□□ 1.19
SPIDR-220ENST00000522900 MPHOSPH10O00566 681 aaKnown RBP22.5■■□□□ 1.19
SPIDR-220ENST00000522900 CTR9Q6PD62 1173 aa22.5■■□□□ 1.19
SPIDR-220ENST00000522900 PI4K2BQ8TCG2 481 aa22.5■■□□□ 1.19
SPIDR-220ENST00000522900 KIAA1683Q9H0B3 1180 aa22.5■■□□□ 1.19
SPIDR-220ENST00000522900 RBPJLQ9UBG7 517 aa22.5■■□□□ 1.19
SPIDR-220ENST00000522900 MORF4L1Q9UBU8 362 aa22.5■■□□□ 1.19
SPIDR-220ENST00000522900 BIN2Q9UBW5 565 aaPredicted RBP22.5■■□□□ 1.19
SPIDR-220ENST00000522900 NAV1Q8NEY1 1877 aa22.49■■□□□ 1.19
SPIDR-220ENST00000522900 A0A1W2PRG0 241 aa22.49■■□□□ 1.19
SPIDR-220ENST00000522900 RNF113AO15541 343 aaKnown RBP22.49■■□□□ 1.19
SPIDR-220ENST00000522900 ADCY3O60266 1144 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms