RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 ATP8B2P98198 1209 aa18.22■□□□□ 0.51
PRKDC-204ENST00000521331 DNAJC18Q9H819 358 aa18.22■□□□□ 0.51
PRKDC-204ENST00000521331 HMX1Q9NP08 348 aaPredicted RBP18.22■□□□□ 0.51
PRKDC-204ENST00000521331 SURF6O75683 361 aaKnown RBP18.21■□□□□ 0.51
PRKDC-204ENST00000521331 ADGRA1Q86SQ6 560 aa18.21■□□□□ 0.51
PRKDC-204ENST00000521331 CERS3Q8IU89 383 aa18.21■□□□□ 0.51
PRKDC-204ENST00000521331 GPRC5AQ8NFJ5 357 aa18.21■□□□□ 0.51
PRKDC-204ENST00000521331 GTF3C2Q8WUA4 911 aaPredicted RBP18.21■□□□□ 0.51
PRKDC-204ENST00000521331 SOCS4Q8WXH5 440 aa18.21■□□□□ 0.51
PRKDC-204ENST00000521331 P2RX7Q99572 595 aaKnown RBP18.21■□□□□ 0.51
PRKDC-204ENST00000521331 PALD1Q9ULE6 856 aa18.21■□□□□ 0.51
PRKDC-204ENST00000521331 ZBTB21Q9ULJ3 1066 aa18.21■□□□□ 0.51
PRKDC-204ENST00000521331 ZAP70P43403 619 aa18.2■□□□□ 0.5
PRKDC-204ENST00000521331 HERVK_113P62684 666 aa18.2■□□□□ 0.5
PRKDC-204ENST00000521331 TRMT44Q8IYL2 757 aaKnown RBP18.2■□□□□ 0.5
PRKDC-204ENST00000521331 NUDT12Q9BQG2 462 aa18.2■□□□□ 0.5
PRKDC-204ENST00000521331 NOP58Q9Y2X3 529 aaKnown RBP18.2■□□□□ 0.5
PRKDC-204ENST00000521331 GDF11O95390 407 aa18.19■□□□□ 0.5
PRKDC-204ENST00000521331 XRCC5P13010 732 aaKnown RBP18.19■□□□□ 0.5
PRKDC-204ENST00000521331 MAPK4P31152 587 aa18.19■□□□□ 0.5
PRKDC-204ENST00000521331 JAG1P78504 1218 aa18.19■□□□□ 0.5
PRKDC-204ENST00000521331 PDE3AQ14432 1141 aa18.19■□□□□ 0.5
PRKDC-204ENST00000521331 FTSJ3Q8IY81 847 aaKnown RBP18.19■□□□□ 0.5
PRKDC-204ENST00000521331 DIS3LQ8TF46 1054 aaKnown RBP18.19■□□□□ 0.5
PRKDC-204ENST00000521331 TRIB2Q92519 343 aa18.19■□□□□ 0.5
PRKDC-204ENST00000521331 NBPF3Q9H094 633 aa18.19■□□□□ 0.5
PRKDC-204ENST00000521331 PIH1D3Q9NQM4 214 aaKnown RBP18.19■□□□□ 0.5
PRKDC-204ENST00000521331 MAST2Q6P0Q8 1798 aa18.19■□□□□ 0.5
PRKDC-204ENST00000521331 CYP2B6P20813 491 aa18.18■□□□□ 0.5
PRKDC-204ENST00000521331 CYP7A1P22680 504 aa18.18■□□□□ 0.5
PRKDC-204ENST00000521331 TRIM32Q13049 653 aa18.18■□□□□ 0.5
PRKDC-204ENST00000521331 TXNRD2Q9NNW7 524 aa18.18■□□□□ 0.5
PRKDC-204ENST00000521331 SAP30BPQ9UHR5 308 aaKnown RBP18.18■□□□□ 0.5
PRKDC-204ENST00000521331 DBNLQ9UJU6 430 aaKnown RBP18.18■□□□□ 0.5
PRKDC-204ENST00000521331 ATAD5Q96QE3 1844 aa18.17■□□□□ 0.5
PRKDC-204ENST00000521331 DOCK3Q8IZD9 2030 aa18.17■□□□□ 0.5
PRKDC-204ENST00000521331 MAP3K21Q5TCX8 1036 aa18.17■□□□□ 0.5
PRKDC-204ENST00000521331 TMED8Q6PL24 325 aaPredicted RBP18.17■□□□□ 0.5
PRKDC-204ENST00000521331 USP17L2Q6R6M4 530 aa18.17■□□□□ 0.5
PRKDC-204ENST00000521331 CCAR1Q8IX12 1150 aaKnown RBP18.17■□□□□ 0.5
PRKDC-204ENST00000521331 C1orf115Q9H7X2 142 aa18.17■□□□□ 0.5
PRKDC-204ENST00000521331 RBPJLQ9UBG7 517 aa18.17■□□□□ 0.5
PRKDC-204ENST00000521331 STAP2Q9UGK3 403 aa18.17■□□□□ 0.5
PRKDC-204ENST00000521331 OGDHLQ9ULD0 1010 aa18.17■□□□□ 0.5
PRKDC-204ENST00000521331 IDH1O75874 414 aaKnown RBP18.16■□□□□ 0.5
PRKDC-204ENST00000521331 PRKAR2AP13861 404 aaKnown RBP18.16■□□□□ 0.5
PRKDC-204ENST00000521331 ZKSCAN1P17029 563 aaPredicted RBP18.16■□□□□ 0.5
PRKDC-204ENST00000521331 ERVK-9P63128 1117 aa18.16■□□□□ 0.5
PRKDC-204ENST00000521331 ERVK-24P63145 666 aa18.16■□□□□ 0.5
PRKDC-204ENST00000521331 DYNLL1P63167 89 aaKnown RBP18.16■□□□□ 0.5
PRKDC-204ENST00000521331 SHROOM1Q2M3G4 852 aaPredicted RBP18.16■□□□□ 0.5
PRKDC-204ENST00000521331 ITPRIPQ8IWB1 547 aa18.16■□□□□ 0.5
PRKDC-204ENST00000521331 C11orf49Q9H6J7 331 aa18.16■□□□□ 0.5
PRKDC-204ENST00000521331 EMILIN3Q9NT22 766 aa18.16■□□□□ 0.5
PRKDC-204ENST00000521331 SIPA1L1O43166 1804 aa18.16■□□□□ 0.5
PRKDC-204ENST00000521331 GH2P01242 217 aa18.15■□□□□ 0.5
PRKDC-204ENST00000521331 BMP8BP34820 402 aa18.15■□□□□ 0.5
PRKDC-204ENST00000521331 RGS2P41220 211 aa18.15■□□□□ 0.5
PRKDC-204ENST00000521331 USP5P45974 858 aa18.15■□□□□ 0.5
PRKDC-204ENST00000521331 TATDN1Q6P1N9 297 aa18.15■□□□□ 0.5
PRKDC-204ENST00000521331 C7orf61Q8IZ16 206 aa18.15■□□□□ 0.5
PRKDC-204ENST00000521331 EAF2Q96CJ1 260 aaPredicted RBP18.15■□□□□ 0.5
PRKDC-204ENST00000521331 C12orf42Q96LP6 360 aa18.15■□□□□ 0.5
PRKDC-204ENST00000521331 CCDC8Q9H0W5 538 aaPredicted RBP18.15■□□□□ 0.5
PRKDC-204ENST00000521331 EHD4Q9H223 541 aa18.15■□□□□ 0.5
PRKDC-204ENST00000521331 TLR7Q9NYK1 1049 aaKnown RBP18.15■□□□□ 0.5
PRKDC-204ENST00000521331 PEX10O60683 326 aa18.14■□□□□ 0.49
PRKDC-204ENST00000521331 MNX1P50219 401 aaPredicted RBP18.14■□□□□ 0.49
PRKDC-204ENST00000521331 Q3C1V9 767 aa18.14■□□□□ 0.49
PRKDC-204ENST00000521331 GPR142Q7Z601 462 aa18.14■□□□□ 0.49
PRKDC-204ENST00000521331 PLEKHH3Q7Z736 793 aa18.14■□□□□ 0.49
PRKDC-204ENST00000521331 TTC6Q86TZ1 520 aa18.14■□□□□ 0.49
PRKDC-204ENST00000521331 MIGA1Q8NAN2 632 aa18.14■□□□□ 0.49
PRKDC-204ENST00000521331 USP6NLQ92738 828 aa18.14■□□□□ 0.49
PRKDC-204ENST00000521331 FEZ1Q99689 392 aa18.14■□□□□ 0.49
PRKDC-204ENST00000521331 GDF15Q99988 308 aa18.14■□□□□ 0.49
PRKDC-204ENST00000521331 PAGR1Q9BTK6 254 aa18.14■□□□□ 0.49
PRKDC-204ENST00000521331 SERPINB13Q9UIV8 391 aa18.14■□□□□ 0.49
PRKDC-204ENST00000521331 USP17L15C9J2P7 530 aa18.13■□□□□ 0.49
PRKDC-204ENST00000521331 USP17L13C9JLJ4 530 aa18.13■□□□□ 0.49
PRKDC-204ENST00000521331 USP17L11C9JVI0 530 aa18.13■□□□□ 0.49
PRKDC-204ENST00000521331 USP17L18D6R9N7 530 aa18.13■□□□□ 0.49
PRKDC-204ENST00000521331 USP17L22D6RA61 530 aa18.13■□□□□ 0.49
PRKDC-204ENST00000521331 USP17L17D6RBQ6 530 aa18.13■□□□□ 0.49
PRKDC-204ENST00000521331 USP17L19D6RCP7 530 aa18.13■□□□□ 0.49
PRKDC-204ENST00000521331 USP17L20D6RJB6 530 aa18.13■□□□□ 0.49
PRKDC-204ENST00000521331 USP14P54578 494 aa18.13■□□□□ 0.49
PRKDC-204ENST00000521331 CCNA1P78396 465 aa18.13■□□□□ 0.49
PRKDC-204ENST00000521331 USP17L24Q0WX57 530 aa18.13■□□□□ 0.49
PRKDC-204ENST00000521331 MAP3K12Q12852 859 aa18.13■□□□□ 0.49
PRKDC-204ENST00000521331 MORN1Q5T089 497 aa18.13■□□□□ 0.49
PRKDC-204ENST00000521331 ERC1Q8IUD2 1116 aa18.13■□□□□ 0.49
PRKDC-204ENST00000521331 MAGEB6Q8N7X4 407 aa18.13■□□□□ 0.49
PRKDC-204ENST00000521331 APBA2Q99767 749 aa18.13■□□□□ 0.49
PRKDC-204ENST00000521331 PORCNQ9H237 461 aa18.13■□□□□ 0.49
PRKDC-204ENST00000521331 CWC22Q9HCG8 908 aaKnown RBP18.13■□□□□ 0.49
PRKDC-204ENST00000521331 RABGAP1Q9Y3P9 1069 aa18.13■□□□□ 0.49
PRKDC-204ENST00000521331 LAMA3Q16787 3333 aa18.12■□□□□ 0.49
PRKDC-204ENST00000521331 SOX1O00570 391 aaPredicted RBP18.12■□□□□ 0.49
PRKDC-204ENST00000521331 GLRX3O76003 335 aaKnown RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms