RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-208ENST00000520580 PPP2R2AP63151 447 aa4.77□□□□□ -1.65
SREK1-208ENST00000520580 TMPRSS15P98073 1019 aa4.77□□□□□ -1.65
SREK1-208ENST00000520580 GSTM4Q03013 218 aa4.77□□□□□ -1.65
SREK1-208ENST00000520580 ZNF460Q14592 562 aa4.77□□□□□ -1.65
SREK1-208ENST00000520580 PCBP1Q15365 356 aaKnown RBP eCLIP4.77□□□□□ -1.65
SREK1-208ENST00000520580 DBN1Q16643 649 aa4.77□□□□□ -1.65
SREK1-208ENST00000520580 CCSAPQ6IQ19 270 aaPredicted RBP4.77□□□□□ -1.65
SREK1-208ENST00000520580 KSR2Q6VAB6 950 aa4.77□□□□□ -1.65
SREK1-208ENST00000520580 RIN3Q8TB24 985 aa4.77□□□□□ -1.65
SREK1-208ENST00000520580 COG1Q8WTW3 980 aa4.77□□□□□ -1.65
SREK1-208ENST00000520580 YIPF4Q9BSR8 244 aa4.77□□□□□ -1.65
SREK1-208ENST00000520580 SMG9Q9H0W8 520 aaKnown RBP4.77□□□□□ -1.65
SREK1-208ENST00000520580 AASDHPPTQ9NRN7 309 aa4.77□□□□□ -1.65
SREK1-208ENST00000520580 TRBV23-1A0A0A0MS06 115 aa4.77□□□□□ -1.65
SREK1-208ENST00000520580 LOC100996750A0A140TA64 210 aa4.77□□□□□ -1.65
SREK1-208ENST00000520580 SOX1O00570 391 aaPredicted RBP4.77□□□□□ -1.65
SREK1-208ENST00000520580 TBX1O43435 398 aa4.77□□□□□ -1.65
SREK1-208ENST00000520580 KPNA6O60684 536 aa4.77□□□□□ -1.65
SREK1-208ENST00000520580 RFPL3O75679 317 aa4.77□□□□□ -1.65
SREK1-208ENST00000520580 PTPRAP18433 802 aa4.77□□□□□ -1.65
SREK1-208ENST00000520580 BRD3Q15059 726 aa4.77□□□□□ -1.65
SREK1-208ENST00000520580 PKN3Q6P5Z2 889 aa4.77□□□□□ -1.65
SREK1-208ENST00000520580 C12orf40Q86WS4 652 aa4.77□□□□□ -1.65
SREK1-208ENST00000520580 ELMO3Q96BJ8 720 aa4.77□□□□□ -1.65
SREK1-208ENST00000520580 APBA2Q99767 749 aa4.77□□□□□ -1.65
SREK1-208ENST00000520580 KRTAP4-6Q9BYQ5 205 aa4.77□□□□□ -1.65
SREK1-208ENST00000520580 TRIM8Q9BZR9 551 aa4.77□□□□□ -1.65
SREK1-208ENST00000520580 ARNT2Q9HBZ2 717 aa4.77□□□□□ -1.65
SREK1-208ENST00000520580 SLC5A4Q9NY91 659 aa4.77□□□□□ -1.65
SREK1-208ENST00000520580 NAGPAQ9UK23 515 aa4.77□□□□□ -1.65
SREK1-208ENST00000520580 LDHAP00338 332 aaKnown RBP4.76□□□□□ -1.65
SREK1-208ENST00000520580 EPHX1P07099 455 aa4.76□□□□□ -1.65
SREK1-208ENST00000520580 RAG1P15918 1043 aa4.76□□□□□ -1.65
SREK1-208ENST00000520580 OS9Q13438 667 aaPredicted RBP4.76□□□□□ -1.65
SREK1-208ENST00000520580 NEUROD1Q13562 356 aa4.76□□□□□ -1.65
SREK1-208ENST00000520580 SYT9Q86SS6 491 aa4.76□□□□□ -1.65
SREK1-208ENST00000520580 LRRN4CLQ8ND94 238 aa4.76□□□□□ -1.65
SREK1-208ENST00000520580 TTC8Q8TAM2 541 aa4.76□□□□□ -1.65
SREK1-208ENST00000520580 HOOK2Q96ED9 719 aa4.76□□□□□ -1.65
SREK1-208ENST00000520580 WDR89Q96FK6 387 aaPredicted RBP4.76□□□□□ -1.65
SREK1-208ENST00000520580 FGD4Q96M96 766 aa4.76□□□□□ -1.65
SREK1-208ENST00000520580 APEX2Q9UBZ4 518 aa4.76□□□□□ -1.65
SREK1-208ENST00000520580 SFMBT1Q9UHJ3 866 aa4.76□□□□□ -1.65
SREK1-208ENST00000520580 DNAJC25-GNG10A0A024R161 153 aa4.76□□□□□ -1.65
SREK1-208ENST00000520580 TRAV20A0A0B4J274 112 aa4.76□□□□□ -1.65
SREK1-208ENST00000520580 FAM177BA6PVY3 158 aa4.76□□□□□ -1.65
SREK1-208ENST00000520580 MAN1A2O60476 641 aa4.76□□□□□ -1.65
SREK1-208ENST00000520580 PGRP06401 933 aa4.76□□□□□ -1.65
SREK1-208ENST00000520580 PCBP4P57723 403 aaKnown RBP4.76□□□□□ -1.65
SREK1-208ENST00000520580 LAMC2Q13753 1193 aa4.76□□□□□ -1.65
SREK1-208ENST00000520580 FNDC3BQ53EP0 1204 aaKnown RBP4.76□□□□□ -1.65
SREK1-208ENST00000520580 INTS3Q68E01 1043 aaKnown RBP4.76□□□□□ -1.65
SREK1-208ENST00000520580 TAB3Q8N5C8 712 aaPredicted RBP4.76□□□□□ -1.65
SREK1-208ENST00000520580 SLC6A18Q96N87 628 aa4.76□□□□□ -1.65
SREK1-208ENST00000520580 EPN3Q9H201 632 aa4.76□□□□□ -1.65
SREK1-208ENST00000520580 CNNM2Q9H8M5 875 aa4.76□□□□□ -1.65
SREK1-208ENST00000520580 LRRC4BQ9NT99 713 aa4.76□□□□□ -1.65
SREK1-208ENST00000520580 NDOR1Q9UHB4 597 aa4.76□□□□□ -1.65
SREK1-208ENST00000520580 ZNF214Q9UL59 606 aaPredicted RBP4.76□□□□□ -1.65
SREK1-208ENST00000520580 CCDC163A0A0D9SF12 145 aa4.75□□□□□ -1.65
SREK1-208ENST00000520580 DNAJC8O75937 253 aaPredicted RBP4.75□□□□□ -1.65
SREK1-208ENST00000520580 PIN1Q13526 163 aaPredicted RBP4.75□□□□□ -1.65
SREK1-208ENST00000520580 STAT4Q14765 748 aa4.75□□□□□ -1.65
SREK1-208ENST00000520580 SEPT7Q16181 437 aaKnown RBP4.75□□□□□ -1.65
SREK1-208ENST00000520580 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.75□□□□□ -1.65
SREK1-208ENST00000520580 ELMSAN1Q6PJG2 1045 aa4.75□□□□□ -1.65
SREK1-208ENST00000520580 HDXQ7Z353 690 aa4.75□□□□□ -1.65
SREK1-208ENST00000520580 TRIM46Q7Z4K8 759 aa4.75□□□□□ -1.65
SREK1-208ENST00000520580 FGD2Q7Z6J4 655 aa4.75□□□□□ -1.65
SREK1-208ENST00000520580 PPFIBP1Q86W92 1011 aa4.75□□□□□ -1.65
SREK1-208ENST00000520580 TICAM2Q86XR7 235 aa4.75□□□□□ -1.65
SREK1-208ENST00000520580 PHACTR4Q8IZ21 702 aa4.75□□□□□ -1.65
SREK1-208ENST00000520580 GTPBP3Q969Y2 492 aaKnown RBP4.75□□□□□ -1.65
SREK1-208ENST00000520580 AARSD1Q9BTE6 412 aaKnown RBP4.75□□□□□ -1.65
SREK1-208ENST00000520580 RTFDC1Q9BY42 306 aaPredicted RBP4.75□□□□□ -1.65
SREK1-208ENST00000520580 CCDC86Q9H6F5 360 aaKnown RBP4.75□□□□□ -1.65
SREK1-208ENST00000520580 NDFIP2Q9NV92 336 aa4.75□□□□□ -1.65
SREK1-208ENST00000520580 TNPO3Q9Y5L0 923 aaKnown RBP4.75□□□□□ -1.65
SREK1-208ENST00000520580 COMMD10Q9Y6G5 202 aa4.75□□□□□ -1.65
SREK1-208ENST00000520580 C9IYK1 514 aa4.75□□□□□ -1.65
SREK1-208ENST00000520580 GPR25O00155 361 aa4.75□□□□□ -1.65
SREK1-208ENST00000520580 TNFRSF10CO14798 259 aa4.75□□□□□ -1.65
SREK1-208ENST00000520580 PRODHO43272 600 aa4.75□□□□□ -1.65
SREK1-208ENST00000520580 OPA1O60313 960 aa4.75□□□□□ -1.65
SREK1-208ENST00000520580 MYL1P05976 194 aa4.75□□□□□ -1.65
SREK1-208ENST00000520580 ITGAVP06756 1048 aa4.75□□□□□ -1.65
SREK1-208ENST00000520580 GRK4P32298 578 aa4.75□□□□□ -1.65
SREK1-208ENST00000520580 ID4P47928 161 aa4.75□□□□□ -1.65
SREK1-208ENST00000520580 ETF1P62495 437 aaKnown RBP4.75□□□□□ -1.65
SREK1-208ENST00000520580 CTBSQ01459 385 aa4.75□□□□□ -1.65
SREK1-208ENST00000520580 SAFB2Q14151 953 aaKnown RBP eCLIP4.75□□□□□ -1.65
SREK1-208ENST00000520580 PDE3AQ14432 1141 aa4.75□□□□□ -1.65
SREK1-208ENST00000520580 HSP90AA2PQ14568 343 aaPredicted RBP4.75□□□□□ -1.65
SREK1-208ENST00000520580 LBRQ14739 615 aaKnown RBP4.75□□□□□ -1.65
SREK1-208ENST00000520580 SKOR2Q2VWA4 1001 aaPredicted RBP4.75□□□□□ -1.65
SREK1-208ENST00000520580 ZC3H12BQ5HYM0 836 aaKnown RBP4.75□□□□□ -1.65
SREK1-208ENST00000520580 CDCP2Q5VXM1 449 aa4.75□□□□□ -1.65
SREK1-208ENST00000520580 BRAPQ7Z569 592 aa4.75□□□□□ -1.65
SREK1-208ENST00000520580 DDX1Q92499 740 aaKnown RBP4.75□□□□□ -1.65
SREK1-208ENST00000520580 DPH2Q9BQC3 489 aaPredicted RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms