RNA–Protein interactions for RNA: ENST00000518040.5

SH2D4A-202, Transcript of SH2 domain containing 4A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SH2D4A, Length 1,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-202ENST00000518040 ZBTB47Q9UFB7 747 aaPredicted RBP12.27□□□□□ -0.45
SH2D4A-202ENST00000518040 EYA2O00167 538 aa12.26□□□□□ -0.45
SH2D4A-202ENST00000518040 CAP2P40123 477 aa12.26□□□□□ -0.45
SH2D4A-202ENST00000518040 RTP1P59025 263 aa12.26□□□□□ -0.45
SH2D4A-202ENST00000518040 PICALMQ13492 652 aa12.26□□□□□ -0.45
SH2D4A-202ENST00000518040 MORN1Q5T089 497 aa12.26□□□□□ -0.45
SH2D4A-202ENST00000518040 SPTY2D1Q68D10 685 aaPredicted RBP12.26□□□□□ -0.45
SH2D4A-202ENST00000518040 PLEKHH3Q7Z736 793 aa12.26□□□□□ -0.45
SH2D4A-202ENST00000518040 ANKRD44Q8N8A2 993 aa12.26□□□□□ -0.45
SH2D4A-202ENST00000518040 PRKRIP1Q9H875 184 aaPredicted RBP12.26□□□□□ -0.45
SH2D4A-202ENST00000518040 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.26□□□□□ -0.45
SH2D4A-202ENST00000518040 FBXO3Q9UK99 471 aa12.26□□□□□ -0.45
SH2D4A-202ENST00000518040 PRUNE2Q8WUY3 3088 aa12.26□□□□□ -0.45
SH2D4A-202ENST00000518040 MUC3AQ02505 3323 aa12.26□□□□□ -0.45
SH2D4A-202ENST00000518040 C19orf81C9J6K1 198 aa12.26□□□□□ -0.45
SH2D4A-202ENST00000518040 HERVK_113P62684 666 aa12.26□□□□□ -0.45
SH2D4A-202ENST00000518040 DDX10Q13206 875 aaKnown RBP12.26□□□□□ -0.45
SH2D4A-202ENST00000518040 GPR142Q7Z601 462 aa12.26□□□□□ -0.45
SH2D4A-202ENST00000518040 WDR18Q9BV38 432 aa12.26□□□□□ -0.45
SH2D4A-202ENST00000518040 CWC22Q9HCG8 908 aaKnown RBP12.26□□□□□ -0.45
SH2D4A-202ENST00000518040 DDX4Q9NQI0 724 aaKnown RBP12.26□□□□□ -0.45
SH2D4A-202ENST00000518040 DDX20Q9UHI6 824 aaKnown RBP12.26□□□□□ -0.45
SH2D4A-202ENST00000518040 HERC5Q9UII4 1024 aaKnown RBP12.26□□□□□ -0.45
SH2D4A-202ENST00000518040 LTBP2Q14767 1821 aa12.25□□□□□ -0.45
SH2D4A-202ENST00000518040 MYH2Q9UKX2 1941 aa12.25□□□□□ -0.45
SH2D4A-202ENST00000518040 ATN1P54259 1190 aaPredicted RBP12.25□□□□□ -0.45
SH2D4A-202ENST00000518040 BACE1P56817 501 aa12.25□□□□□ -0.45
SH2D4A-202ENST00000518040 ERVK-9P63128 1117 aa12.25□□□□□ -0.45
SH2D4A-202ENST00000518040 ERVK-24P63145 666 aa12.25□□□□□ -0.45
SH2D4A-202ENST00000518040 EXOSC9Q06265 439 aaKnown RBP12.25□□□□□ -0.45
SH2D4A-202ENST00000518040 ASTLQ6HA08 431 aaPredicted RBP12.25□□□□□ -0.45
SH2D4A-202ENST00000518040 WDR63Q8IWG1 891 aa12.25□□□□□ -0.45
SH2D4A-202ENST00000518040 ARRDC4Q8NCT1 418 aa12.25□□□□□ -0.45
SH2D4A-202ENST00000518040 ATXN2LQ8WWM7 1075 aaKnown RBP12.25□□□□□ -0.45
SH2D4A-202ENST00000518040 EDC3Q96F86 508 aaKnown RBP12.25□□□□□ -0.45
SH2D4A-202ENST00000518040 P2RX7Q99572 595 aaKnown RBP12.25□□□□□ -0.45
SH2D4A-202ENST00000518040 PDS5AQ29RF7 1337 aaKnown RBP12.25□□□□□ -0.45
SH2D4A-202ENST00000518040 ASNSP08243 561 aa12.24□□□□□ -0.45
SH2D4A-202ENST00000518040 BTDP43251 543 aa12.24□□□□□ -0.45
SH2D4A-202ENST00000518040 CCNA1P78396 465 aa12.24□□□□□ -0.45
SH2D4A-202ENST00000518040 MAP2K5Q13163 448 aa12.24□□□□□ -0.45
SH2D4A-202ENST00000518040 CCL14Q16627 93 aa12.24□□□□□ -0.45
SH2D4A-202ENST00000518040 C9orf50Q5SZB4 431 aa12.24□□□□□ -0.45
SH2D4A-202ENST00000518040 KLHDC4Q8TBB5 520 aa12.24□□□□□ -0.45
SH2D4A-202ENST00000518040 GINM1Q9NU53 330 aa12.24□□□□□ -0.45
SH2D4A-202ENST00000518040 ATP11BQ9Y2G3 1177 aa12.24□□□□□ -0.45
SH2D4A-202ENST00000518040 FRMPD3Q5JV73 1810 aa12.24□□□□□ -0.45
SH2D4A-202ENST00000518040 MTMR2Q13614 643 aa12.23□□□□□ -0.45
SH2D4A-202ENST00000518040 ATP2B3Q16720 1220 aa12.23□□□□□ -0.45
SH2D4A-202ENST00000518040 TXNRD2Q9NNW7 524 aa12.23□□□□□ -0.45
SH2D4A-202ENST00000518040 CEP126Q9P2H0 1117 aa12.23□□□□□ -0.45
SH2D4A-202ENST00000518040 RBPJLQ9UBG7 517 aa12.23□□□□□ -0.45
SH2D4A-202ENST00000518040 MROH7-TTC4A0A0A0MT08 1334 aa12.23□□□□□ -0.45
SH2D4A-202ENST00000518040 GPR75-ASB3A0A0A6YYF3 556 aa12.22□□□□□ -0.45
SH2D4A-202ENST00000518040 KBTBD13C9JR72 458 aa12.22□□□□□ -0.45
SH2D4A-202ENST00000518040 SLURP2P0DP57 97 aa12.22□□□□□ -0.45
SH2D4A-202ENST00000518040 SLC39A5Q6ZMH5 540 aa12.22□□□□□ -0.45
SH2D4A-202ENST00000518040 BADQ92934 168 aa12.22□□□□□ -0.45
SH2D4A-202ENST00000518040 PORCNQ9H237 461 aa12.22□□□□□ -0.45
SH2D4A-202ENST00000518040 PRDM5Q9NQX1 630 aaPredicted RBP12.22□□□□□ -0.45
SH2D4A-202ENST00000518040 ARIH1Q9Y4X5 557 aaPredicted RBP12.22□□□□□ -0.45
SH2D4A-202ENST00000518040 CDH23Q9H251 3354 aa12.22□□□□□ -0.45
SH2D4A-202ENST00000518040 ATAD5Q96QE3 1844 aa12.22□□□□□ -0.45
SH2D4A-202ENST00000518040 USP17L10C9JJH3 530 aa12.22□□□□□ -0.45
SH2D4A-202ENST00000518040 ATMINO43313 823 aaPredicted RBP12.22□□□□□ -0.45
SH2D4A-202ENST00000518040 CIAO1O76071 339 aa12.22□□□□□ -0.45
SH2D4A-202ENST00000518040 LDHCP07864 332 aa12.22□□□□□ -0.45
SH2D4A-202ENST00000518040 CNGA1P29973 690 aa12.22□□□□□ -0.45
SH2D4A-202ENST00000518040 ATP2B2Q01814 1243 aa12.22□□□□□ -0.45
SH2D4A-202ENST00000518040 SNX17Q15036 470 aa12.22□□□□□ -0.45
SH2D4A-202ENST00000518040 C1orf53Q5VUE5 145 aa12.22□□□□□ -0.45
SH2D4A-202ENST00000518040 ABCF2Q9UG63 623 aa12.22□□□□□ -0.45
SH2D4A-202ENST00000518040 RABGAP1Q9Y3P9 1069 aa12.22□□□□□ -0.45
SH2D4A-202ENST00000518040 DNAH12Q6ZR08 3092 aa12.21□□□□□ -0.45
SH2D4A-202ENST00000518040 SLC15A5A6NIM6 579 aa12.21□□□□□ -0.45
SH2D4A-202ENST00000518040 FAM196BA6NMK8 535 aa12.21□□□□□ -0.45
SH2D4A-202ENST00000518040 HOXC6P09630 235 aa12.21□□□□□ -0.45
SH2D4A-202ENST00000518040 NUBP1P53384 320 aa12.21□□□□□ -0.45
SH2D4A-202ENST00000518040 RHBDL3P58872 404 aa12.21□□□□□ -0.45
SH2D4A-202ENST00000518040 GSTO1P78417 241 aa12.21□□□□□ -0.45
SH2D4A-202ENST00000518040 Q3C1V9 767 aa12.21□□□□□ -0.45
SH2D4A-202ENST00000518040 RNPC3Q96LT9 517 aaKnown RBP12.21□□□□□ -0.45
SH2D4A-202ENST00000518040 PAGR1Q9BTK6 254 aa12.21□□□□□ -0.45
SH2D4A-202ENST00000518040 DHX36Q9H2U1 1008 aaKnown RBP12.21□□□□□ -0.45
SH2D4A-202ENST00000518040 PI4KBQ9UBF8 816 aa12.21□□□□□ -0.45
SH2D4A-202ENST00000518040 IVNS1ABPQ9Y6Y0 642 aa12.21□□□□□ -0.45
SH2D4A-202ENST00000518040 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.2□□□□□ -0.46
SH2D4A-202ENST00000518040 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.2□□□□□ -0.46
SH2D4A-202ENST00000518040 PHKA1P46020 1223 aa12.2□□□□□ -0.46
SH2D4A-202ENST00000518040 RFX5P48382 616 aaPredicted RBP12.2□□□□□ -0.46
SH2D4A-202ENST00000518040 MAP3K12Q12852 859 aa12.2□□□□□ -0.46
SH2D4A-202ENST00000518040 ERICH6Q7L0X2 663 aa12.2□□□□□ -0.46
SH2D4A-202ENST00000518040 ATG9AQ7Z3C6 839 aa12.2□□□□□ -0.46
SH2D4A-202ENST00000518040 IL27Q8NEV9 243 aa12.2□□□□□ -0.46
SH2D4A-202ENST00000518040 GAS2L1Q99501 681 aaPredicted RBP12.2□□□□□ -0.46
SH2D4A-202ENST00000518040 C1QTNF1Q9BXJ1 281 aa12.2□□□□□ -0.46
SH2D4A-202ENST00000518040 PDLIM7Q9NR12 457 aa12.2□□□□□ -0.46
SH2D4A-202ENST00000518040 THEGQ9P2T0 379 aa12.2□□□□□ -0.46
SH2D4A-202ENST00000518040 TACC3Q9Y6A5 838 aa12.2□□□□□ -0.46
SH2D4A-202ENST00000518040 PTPREP23469 700 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms