RNA–Protein interactions for RNA: ENST00000517838.5

PVT1-206, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 518 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-206ENST00000517838 BCAMP50895 628 aa9.08□□□□□ -0.96
PVT1-206ENST00000517838 HDAC1Q13547 482 aaPredicted RBP9.08□□□□□ -0.96
PVT1-206ENST00000517838 HHIPL2Q6UWX4 724 aa9.08□□□□□ -0.96
PVT1-206ENST00000517838 Q7L0L9 218 aa9.08□□□□□ -0.96
PVT1-206ENST00000517838 VPS37DQ86XT2 251 aa9.08□□□□□ -0.96
PVT1-206ENST00000517838 FAM151AQ8WW52 585 aa9.08□□□□□ -0.96
PVT1-206ENST00000517838 PAWRQ96IZ0 340 aaKnown RBP9.08□□□□□ -0.96
PVT1-206ENST00000517838 PARK7Q99497 189 aaKnown RBP9.08□□□□□ -0.96
PVT1-206ENST00000517838 GDF15Q99988 308 aa9.08□□□□□ -0.96
PVT1-206ENST00000517838 ZBED2Q9BTP6 218 aa9.08□□□□□ -0.96
PVT1-206ENST00000517838 C1orf115Q9H7X2 142 aa9.08□□□□□ -0.96
PVT1-206ENST00000517838 PAK6Q9NQU5 681 aaPredicted RBP9.08□□□□□ -0.96
PVT1-206ENST00000517838 TMOD2Q9NZR1 351 aa9.08□□□□□ -0.96
PVT1-206ENST00000517838 SPEF2Q9C093 1822 aa9.08□□□□□ -0.96
PVT1-206ENST00000517838 PTPRCP08575 1304 aa9.07□□□□□ -0.96
PVT1-206ENST00000517838 OTOFQ9HC10 1997 aa9.07□□□□□ -0.96
PVT1-206ENST00000517838 HRO43593 1189 aa9.07□□□□□ -0.96
PVT1-206ENST00000517838 FRAT2O75474 233 aaPredicted RBP9.07□□□□□ -0.96
PVT1-206ENST00000517838 COL9A1P20849 921 aa9.07□□□□□ -0.96
PVT1-206ENST00000517838 BMP8BP34820 402 aa9.07□□□□□ -0.96
PVT1-206ENST00000517838 NFIAQ12857 509 aa9.07□□□□□ -0.96
PVT1-206ENST00000517838 LRRC24Q50LG9 513 aa9.07□□□□□ -0.96
PVT1-206ENST00000517838 NOL9Q5SY16 702 aaKnown RBP9.07□□□□□ -0.96
PVT1-206ENST00000517838 ZFPM1Q8IX07 1006 aa9.07□□□□□ -0.96
PVT1-206ENST00000517838 DEFB123Q8N688 67 aa9.07□□□□□ -0.96
PVT1-206ENST00000517838 VGLL2Q8N8G2 317 aa9.07□□□□□ -0.96
PVT1-206ENST00000517838 PXYLP1Q8TE99 480 aa9.07□□□□□ -0.96
PVT1-206ENST00000517838 SUCLG2Q96I99 432 aa9.07□□□□□ -0.96
PVT1-206ENST00000517838 ZBTB40Q9NUA8 1239 aa9.07□□□□□ -0.96
PVT1-206ENST00000517838 VPS9D1Q9Y2B5 631 aa9.07□□□□□ -0.96
PVT1-206ENST00000517838 RPAP1Q9BWH6 1393 aaPredicted RBP9.07□□□□□ -0.96
PVT1-206ENST00000517838 MROH5Q6ZUA9 1318 aa9.06□□□□□ -0.96
PVT1-206ENST00000517838 UNC80Q8N2C7 3258 aa9.06□□□□□ -0.96
PVT1-206ENST00000517838 PHF20L1A8MW92 1017 aa9.06□□□□□ -0.96
PVT1-206ENST00000517838 SEMA3EO15041 775 aa9.06□□□□□ -0.96
PVT1-206ENST00000517838 MAP3K7O43318 606 aa9.06□□□□□ -0.96
PVT1-206ENST00000517838 TCP10Q12799 353 aa9.06□□□□□ -0.96
PVT1-206ENST00000517838 IRF5Q13568 498 aa9.06□□□□□ -0.96
PVT1-206ENST00000517838 C8orf34Q49A92 452 aa9.06□□□□□ -0.96
PVT1-206ENST00000517838 CAVIN4Q5BKX8 364 aa9.06□□□□□ -0.96
PVT1-206ENST00000517838 CDC42EP5Q6NZY7 148 aa9.06□□□□□ -0.96
PVT1-206ENST00000517838 DIS3LQ8TF46 1054 aaKnown RBP9.06□□□□□ -0.96
PVT1-206ENST00000517838 MTMR10Q9NXD2 777 aa9.06□□□□□ -0.96
PVT1-206ENST00000517838 C9orf78Q9NZ63 289 aaPredicted RBP9.06□□□□□ -0.96
PVT1-206ENST00000517838 FAM198AQ9UFP1 575 aa9.06□□□□□ -0.96
PVT1-206ENST00000517838 STXBP5LQ9Y2K9 1186 aa9.06□□□□□ -0.96
PVT1-206ENST00000517838 SUGT1Q9Y2Z0 365 aa9.06□□□□□ -0.96
PVT1-206ENST00000517838 VCANP13611 3396 aa9.05□□□□□ -0.96
PVT1-206ENST00000517838 A0A0G2JLL6 359 aaPredicted RBP9.05□□□□□ -0.96
PVT1-206ENST00000517838 PDE8BO95263 885 aa9.05□□□□□ -0.96
PVT1-206ENST00000517838 CAPN2P17655 700 aa9.05□□□□□ -0.96
PVT1-206ENST00000517838 PTPRAP18433 802 aa9.05□□□□□ -0.96
PVT1-206ENST00000517838 TSR1Q2NL82 804 aaKnown RBP9.05□□□□□ -0.96
PVT1-206ENST00000517838 LRIT3Q3SXY7 679 aa9.05□□□□□ -0.96
PVT1-206ENST00000517838 SLC4A10Q6U841 1118 aa9.05□□□□□ -0.96
PVT1-206ENST00000517838 NECAB2Q7Z6G3 386 aa9.05□□□□□ -0.96
PVT1-206ENST00000517838 PRRT2Q7Z6L0 340 aaPredicted RBP9.05□□□□□ -0.96
PVT1-206ENST00000517838 C7orf61Q8IZ16 206 aa9.05□□□□□ -0.96
PVT1-206ENST00000517838 COL25A1Q9BXS0 654 aaPredicted RBP9.05□□□□□ -0.96
PVT1-206ENST00000517838 BCL11AQ9H165 835 aa9.05□□□□□ -0.96
PVT1-206ENST00000517838 ZMYND8Q9ULU4 1186 aaPredicted RBP9.05□□□□□ -0.96
PVT1-206ENST00000517838 DAGLAQ9Y4D2 1042 aa9.05□□□□□ -0.96
PVT1-206ENST00000517838 AFG3L2Q9Y4W6 797 aa9.05□□□□□ -0.96
PVT1-206ENST00000517838 ZHX2Q9Y6X8 837 aa9.05□□□□□ -0.96
PVT1-206ENST00000517838 MYH3P11055 1940 aa9.04□□□□□ -0.96
PVT1-206ENST00000517838 ECM29Q5VYK3 1845 aa9.04□□□□□ -0.96
PVT1-206ENST00000517838 TNPO2O14787 897 aaKnown RBP9.04□□□□□ -0.96
PVT1-206ENST00000517838 ALDH1L1O75891 902 aa9.04□□□□□ -0.96
PVT1-206ENST00000517838 NBPF7P0C2Y1 421 aaPredicted RBP9.04□□□□□ -0.96
PVT1-206ENST00000517838 FGFR2P21802 821 aa9.04□□□□□ -0.96
PVT1-206ENST00000517838 DIXDC1Q155Q3 683 aa9.04□□□□□ -0.96
PVT1-206ENST00000517838 RABL6Q3YEC7 729 aaPredicted RBP9.04□□□□□ -0.96
PVT1-206ENST00000517838 METTL24Q5JXM2 366 aa9.04□□□□□ -0.96
PVT1-206ENST00000517838 FASTKD5Q7L8L6 764 aaKnown RBP9.04□□□□□ -0.96
PVT1-206ENST00000517838 LNPKQ9C0E8 428 aa9.04□□□□□ -0.96
PVT1-206ENST00000517838 SRCIN1Q9C0H9 1055 aa9.04□□□□□ -0.96
PVT1-206ENST00000517838 BICC1Q9H694 974 aaKnown RBP9.04□□□□□ -0.96
PVT1-206ENST00000517838 SLC45A1Q9Y2W3 748 aa9.04□□□□□ -0.96
PVT1-206ENST00000517838 MAST3O60307 1309 aa9.04□□□□□ -0.96
PVT1-206ENST00000517838 SLURP2P0DP57 97 aa9.03□□□□□ -0.96
PVT1-206ENST00000517838 SYN1P17600 705 aa9.03□□□□□ -0.96
PVT1-206ENST00000517838 MAGEA10P43363 369 aaPredicted RBP9.03□□□□□ -0.96
PVT1-206ENST00000517838 MAP3K10Q02779 954 aa9.03□□□□□ -0.96
PVT1-206ENST00000517838 ANKRD45Q5TZF3 282 aa9.03□□□□□ -0.96
PVT1-206ENST00000517838 SH3BP5LQ7L8J4 393 aa9.03□□□□□ -0.96
PVT1-206ENST00000517838 SCYL3Q8IZE3 742 aa9.03□□□□□ -0.96
PVT1-206ENST00000517838 ANKRD13CQ8N6S4 541 aa9.03□□□□□ -0.96
PVT1-206ENST00000517838 ANKRD44Q8N8A2 993 aa9.03□□□□□ -0.96
PVT1-206ENST00000517838 KLHDC4Q8TBB5 520 aa9.03□□□□□ -0.96
PVT1-206ENST00000517838 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.03□□□□□ -0.965e-6■■□□□ 11.7
PVT1-206ENST00000517838 PICK1Q9NRD5 415 aa9.03□□□□□ -0.96
PVT1-206ENST00000517838 USP40Q9NVE5 1235 aa9.03□□□□□ -0.96
PVT1-206ENST00000517838 UTYO14607 1347 aa9.03□□□□□ -0.96
PVT1-206ENST00000517838 ARAP2Q8WZ64 1704 aa9.02□□□□□ -0.96
PVT1-206ENST00000517838 SPTBN5Q9NRC6 3674 aaKnown RBP9.02□□□□□ -0.96
PVT1-206ENST00000517838 ATRNL1Q5VV63 1379 aa9.02□□□□□ -0.97
PVT1-206ENST00000517838 BHMG1C9JSJ3 638 aaPredicted RBP9.02□□□□□ -0.97
PVT1-206ENST00000517838 HMMRO75330 724 aa9.02□□□□□ -0.97
PVT1-206ENST00000517838 NUCB1Q02818 461 aa9.02□□□□□ -0.97
PVT1-206ENST00000517838 TRIM32Q13049 653 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms