RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 DDX49Q9Y6V7 483 aaKnown RBP15□□□□□ -0.01
PVT1-203ENST00000513868 GREB1LQ9C091 1923 aaPredicted RBP14.99□□□□□ -0.01
PVT1-203ENST00000513868 PSDA5PKW4 1024 aaPredicted RBP14.99□□□□□ -0.01
PVT1-203ENST00000513868 TSPY2A6NKD2 308 aa14.99□□□□□ -0.01
PVT1-203ENST00000513868 CDKL5O76039 1030 aa14.99□□□□□ -0.01
PVT1-203ENST00000513868 IFNAR1P17181 557 aa14.99□□□□□ -0.01
PVT1-203ENST00000513868 CDK8P49336 464 aa14.99□□□□□ -0.01
PVT1-203ENST00000513868 FOSBP53539 338 aa14.99□□□□□ -0.01
PVT1-203ENST00000513868 RTN1Q16799 776 aa14.99□□□□□ -0.01
PVT1-203ENST00000513868 DALRD3Q5D0E6 543 aaKnown RBP14.99□□□□□ -0.01
PVT1-203ENST00000513868 SOGA3Q5TF21 947 aa14.99□□□□□ -0.01
PVT1-203ENST00000513868 NBPF11Q86T75 865 aa14.99□□□□□ -0.01
PVT1-203ENST00000513868 RGS22Q8NE09 1264 aa14.99□□□□□ -0.01
PVT1-203ENST00000513868 ANKS1AQ92625 1134 aa14.99□□□□□ -0.01
PVT1-203ENST00000513868 MKNK2Q9HBH9 465 aa14.99□□□□□ -0.01
PVT1-203ENST00000513868 GJB4Q9NTQ9 266 aa14.99□□□□□ -0.01
PVT1-203ENST00000513868 SERPINA10Q9UK55 444 aa14.99□□□□□ -0.01
PVT1-203ENST00000513868 GADD45BO75293 160 aaPredicted RBP14.98□□□□□ -0.01
PVT1-203ENST00000513868 GUCY1B3Q02153 619 aa14.98□□□□□ -0.01
PVT1-203ENST00000513868 GABPAQ06546 454 aa14.98□□□□□ -0.01
PVT1-203ENST00000513868 PICALMQ13492 652 aa14.98□□□□□ -0.01
PVT1-203ENST00000513868 CPLX2Q6PUV4 134 aaKnown RBP14.98□□□□□ -0.01
PVT1-203ENST00000513868 LARGE2Q8N3Y3 721 aa14.98□□□□□ -0.01
PVT1-203ENST00000513868 FBXO18Q8NFZ0 1043 aa14.98□□□□□ -0.01
PVT1-203ENST00000513868 GZF1Q9H116 711 aaPredicted RBP14.98□□□□□ -0.01
PVT1-203ENST00000513868 ZSCAN16Q9H4T2 348 aaPredicted RBP14.98□□□□□ -0.01
PVT1-203ENST00000513868 TCP11L1Q9NUJ3 509 aa14.98□□□□□ -0.01
PVT1-203ENST00000513868 CD2APQ9Y5K6 639 aa14.98□□□□□ -0.01
PVT1-203ENST00000513868 STK36Q9NRP7 1315 aa14.98□□□□□ -0.01
PVT1-203ENST00000513868 UBE2Q2LH0YL09 131 aa14.97□□□□□ -0.01
PVT1-203ENST00000513868 FMNL1O95466 1100 aaPredicted RBP14.97□□□□□ -0.01
PVT1-203ENST00000513868 VIL1P09327 827 aaKnown RBP14.97□□□□□ -0.01
PVT1-203ENST00000513868 IARSP41252 1262 aaKnown RBP14.97□□□□□ -0.01
PVT1-203ENST00000513868 NFIAQ12857 509 aa14.97□□□□□ -0.01
PVT1-203ENST00000513868 PPP2R5BQ15173 497 aa14.97□□□□□ -0.01
PVT1-203ENST00000513868 OTUD7BQ6GQQ9 843 aa14.97□□□□□ -0.01
PVT1-203ENST00000513868 NUP133Q8WUM0 1156 aa14.97□□□□□ -0.01
PVT1-203ENST00000513868 C8orf76Q96K31 380 aa14.97□□□□□ -0.01
PVT1-203ENST00000513868 AIFM3Q96NN9 605 aa14.97□□□□□ -0.01
PVT1-203ENST00000513868 GMLQ99445 158 aa14.97□□□□□ -0.01
PVT1-203ENST00000513868 OSBPL5Q9H0X9 879 aaPredicted RBP14.97□□□□□ -0.01
PVT1-203ENST00000513868 MYH4Q9Y623 1939 aa14.97□□□□□ -0.01
PVT1-203ENST00000513868 CCDC196A0A1B0GTZ2 297 aa14.97□□□□□ -0.01
PVT1-203ENST00000513868 DDAH1O94760 285 aa14.97□□□□□ -0.01
PVT1-203ENST00000513868 FUT2Q10981 343 aa14.97□□□□□ -0.01
PVT1-203ENST00000513868 CATIPQ7Z7H3 387 aa14.97□□□□□ -0.01
PVT1-203ENST00000513868 DGKHQ86XP1 1220 aa14.97□□□□□ -0.01
PVT1-203ENST00000513868 ZNF444Q8N0Y2 327 aaPredicted RBP14.97□□□□□ -0.01
PVT1-203ENST00000513868 CMTR1Q8N1G2 835 aaKnown RBP14.97□□□□□ -0.01
PVT1-203ENST00000513868 CRACR2BQ8N4Y2 399 aaPredicted RBP14.97□□□□□ -0.01
PVT1-203ENST00000513868 PSMD14O00487 310 aa14.96□□□□□ -0.01
PVT1-203ENST00000513868 FIBPO43427 364 aa14.96□□□□□ -0.01
PVT1-203ENST00000513868 RAD17O75943 681 aa14.96□□□□□ -0.01
PVT1-203ENST00000513868 TSPY3P0CV98 308 aa14.96□□□□□ -0.01
PVT1-203ENST00000513868 TSPY8P0CW00 308 aa14.96□□□□□ -0.01
PVT1-203ENST00000513868 RSBN1LQ6PCB5 846 aaPredicted RBP14.96□□□□□ -0.01
PVT1-203ENST00000513868 TTC6Q86TZ1 520 aa14.96□□□□□ -0.01
PVT1-203ENST00000513868 ZFPM1Q8IX07 1006 aa14.96□□□□□ -0.01
PVT1-203ENST00000513868 ALG1Q9BT22 464 aa14.96□□□□□ -0.01
PVT1-203ENST00000513868 IDI2Q9BXS1 227 aa14.96□□□□□ -0.01
PVT1-203ENST00000513868 ZNF287Q9HBT7 754 aa14.96□□□□□ -0.01
PVT1-203ENST00000513868 NFKBIEO00221 500 aa14.95□□□□□ -0.02
PVT1-203ENST00000513868 CALM1P0DP23 149 aa14.95□□□□□ -0.02
PVT1-203ENST00000513868 CALM2P0DP24 149 aa14.95□□□□□ -0.02
PVT1-203ENST00000513868 CALM3P0DP25 149 aa14.95□□□□□ -0.02
PVT1-203ENST00000513868 NCLP19338 710 aaKnown RBP14.95□□□□□ -0.02
PVT1-203ENST00000513868 GUCY1A2P33402 732 aa14.95□□□□□ -0.02
PVT1-203ENST00000513868 KRT85P78386 507 aa14.95□□□□□ -0.02
PVT1-203ENST00000513868 SSRP1Q08945 709 aaKnown RBP14.95□□□□□ -0.02
PVT1-203ENST00000513868 NEDD1Q8NHV4 660 aa14.95□□□□□ -0.02
PVT1-203ENST00000513868 SLC26A6Q9BXS9 759 aa14.95□□□□□ -0.02
PVT1-203ENST00000513868 TFIP11Q9UBB9 837 aaKnown RBP14.95□□□□□ -0.02
PVT1-203ENST00000513868 PPP1R1BQ9UD71 204 aaPredicted RBP14.95□□□□□ -0.02
PVT1-203ENST00000513868 FAM198AQ9UFP1 575 aa14.95□□□□□ -0.02
PVT1-203ENST00000513868 ZNRF3Q9ULT6 936 aa14.95□□□□□ -0.02
PVT1-203ENST00000513868 MYO3BQ8WXR4 1341 aa14.95□□□□□ -0.02
PVT1-203ENST00000513868 NPM3O75607 178 aaKnown RBP14.94□□□□□ -0.02
PVT1-203ENST00000513868 NOVP48745 357 aa14.94□□□□□ -0.02
PVT1-203ENST00000513868 RBM5P52756 815 aaKnown RBP eCLIP14.94□□□□□ -0.02
PVT1-203ENST00000513868 CACNB3P54284 484 aa14.94□□□□□ -0.02
PVT1-203ENST00000513868 CFAP100Q494V2 611 aa14.94□□□□□ -0.02
PVT1-203ENST00000513868 PRMT6Q96LA8 375 aaPredicted RBP14.94□□□□□ -0.02
PVT1-203ENST00000513868 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.94□□□□□ -0.02
PVT1-203ENST00000513868 ELP1O95163 1332 aa14.94□□□□□ -0.02
PVT1-203ENST00000513868 PLEKHA8P1O95397 391 aa14.93□□□□□ -0.02
PVT1-203ENST00000513868 MBD3O95983 291 aa14.93□□□□□ -0.02
PVT1-203ENST00000513868 CCDC178Q5BJE1 867 aa14.93□□□□□ -0.02
PVT1-203ENST00000513868 CCDC82Q8N4S0 544 aa14.93□□□□□ -0.02
PVT1-203ENST00000513868 TAOK3Q9H2K8 898 aa14.93□□□□□ -0.02
PVT1-203ENST00000513868 RBM28Q9NW13 759 aaKnown RBP14.93□□□□□ -0.02
PVT1-203ENST00000513868 PLIN4Q96Q06 1357 aa14.93□□□□□ -0.02
PVT1-203ENST00000513868 DICER1Q9UPY3 1922 aaKnown RBP14.93□□□□□ -0.02
PVT1-203ENST00000513868 KIF28PB7ZC32 967 aa14.93□□□□□ -0.02
PVT1-203ENST00000513868 DEKP35659 375 aaKnown RBP14.93□□□□□ -0.02
PVT1-203ENST00000513868 CXCL9Q07325 125 aa14.93□□□□□ -0.02
PVT1-203ENST00000513868 KRT40Q6A162 431 aa14.93□□□□□ -0.02
PVT1-203ENST00000513868 CAVIN1Q6NZI2 390 aaKnown RBP14.93□□□□□ -0.02
PVT1-203ENST00000513868 TMTC3Q6ZXV5 915 aa14.93□□□□□ -0.02
PVT1-203ENST00000513868 SH3BP5LQ7L8J4 393 aa14.93□□□□□ -0.02
PVT1-203ENST00000513868 NIM1KQ8IY84 436 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms