RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 CYP2C8P10632 490 aa14.01□□□□□ -0.17
SH3RF1-205ENST00000511421 SHMT1P34896 483 aa14.01□□□□□ -0.17
SH3RF1-205ENST00000511421 SH3D19Q5HYK7 790 aa14.01□□□□□ -0.17
SH3RF1-205ENST00000511421 SMC5Q8IY18 1101 aa14.01□□□□□ -0.17
SH3RF1-205ENST00000511421 AS3MTQ9HBK9 375 aa14.01□□□□□ -0.17
SH3RF1-205ENST00000511421 ATP8A2Q9NTI2 1148 aa14.01□□□□□ -0.17
SH3RF1-205ENST00000511421 PTPRFP10586 1907 aa14.01□□□□□ -0.17
SH3RF1-205ENST00000511421 DDX60LQ5H9U9 1706 aaKnown RBP14□□□□□ -0.17
SH3RF1-205ENST00000511421 RNF113AO15541 343 aaKnown RBP14□□□□□ -0.17
SH3RF1-205ENST00000511421 IGHDP01880 384 aa14□□□□□ -0.17
SH3RF1-205ENST00000511421 CYP2D6P10635 497 aa14□□□□□ -0.17
SH3RF1-205ENST00000511421 TREML2Q5T2D2 321 aa14□□□□□ -0.17
SH3RF1-205ENST00000511421 PROCA1Q8NCQ7 364 aaPredicted RBP14□□□□□ -0.17
SH3RF1-205ENST00000511421 OSBP2Q969R2 916 aa14□□□□□ -0.17
SH3RF1-205ENST00000511421 PARK7Q99497 189 aaKnown RBP14□□□□□ -0.17
SH3RF1-205ENST00000511421 RWDD1Q9H446 243 aaPredicted RBP14□□□□□ -0.17
SH3RF1-205ENST00000511421 EFCC1Q9HA90 598 aa14□□□□□ -0.17
SH3RF1-205ENST00000511421 CPA4Q9UI42 421 aa14□□□□□ -0.17
SH3RF1-205ENST00000511421 AGTPBP1Q9UPW5 1226 aa14□□□□□ -0.17
SH3RF1-205ENST00000511421 ATAD5Q96QE3 1844 aa13.99□□□□□ -0.17
SH3RF1-205ENST00000511421 GH2P01242 217 aa13.99□□□□□ -0.17
SH3RF1-205ENST00000511421 HMGCS2P54868 508 aa13.99□□□□□ -0.17
SH3RF1-205ENST00000511421 BACE1P56817 501 aa13.99□□□□□ -0.17
SH3RF1-205ENST00000511421 LACTBP83111 547 aaPredicted RBP13.99□□□□□ -0.17
SH3RF1-205ENST00000511421 APPBP2Q92624 585 aa13.99□□□□□ -0.17
SH3RF1-205ENST00000511421 STRBPQ96SI9 672 aaKnown RBP13.99□□□□□ -0.17
SH3RF1-205ENST00000511421 ZBTB47Q9UFB7 747 aaPredicted RBP13.99□□□□□ -0.17
SH3RF1-205ENST00000511421 STAP2Q9UGK3 403 aa13.99□□□□□ -0.17
SH3RF1-205ENST00000511421 PTPN22Q9Y2R2 807 aa13.99□□□□□ -0.17
SH3RF1-205ENST00000511421 MYH7P12883 1935 aa13.99□□□□□ -0.17
SH3RF1-205ENST00000511421 ZFYP08048 801 aaPredicted RBP13.98□□□□□ -0.17
SH3RF1-205ENST00000511421 BCRP11274 1271 aa13.98□□□□□ -0.17
SH3RF1-205ENST00000511421 CERKLQ49MI3 558 aaPredicted RBP13.98□□□□□ -0.17
SH3RF1-205ENST00000511421 ARHGAP39Q9C0H5 1083 aa13.98□□□□□ -0.17
SH3RF1-205ENST00000511421 SLC4A4Q9Y6R1 1079 aa13.98□□□□□ -0.17
SH3RF1-205ENST00000511421 NAV1Q8NEY1 1877 aa13.98□□□□□ -0.17
SH3RF1-205ENST00000511421 SMIM22K7EJ46 135 aa13.98□□□□□ -0.17
SH3RF1-205ENST00000511421 CTGFP29279 349 aa13.98□□□□□ -0.17
SH3RF1-205ENST00000511421 PDE1AP54750 535 aa13.98□□□□□ -0.17
SH3RF1-205ENST00000511421 MTMR2Q13614 643 aa13.98□□□□□ -0.17
SH3RF1-205ENST00000511421 C12orf60Q5U649 245 aa13.98□□□□□ -0.17
SH3RF1-205ENST00000511421 CYP2D7A0A087X1C5 515 aa13.97□□□□□ -0.17
SH3RF1-205ENST00000511421 C19orf81C9J6K1 198 aa13.97□□□□□ -0.17
SH3RF1-205ENST00000511421 USP17L10C9JJH3 530 aa13.97□□□□□ -0.17
SH3RF1-205ENST00000511421 USP17L12C9JPN9 530 aa13.97□□□□□ -0.17
SH3RF1-205ENST00000511421 USP17L21D6R901 530 aa13.97□□□□□ -0.17
SH3RF1-205ENST00000511421 GUCY1A2P33402 732 aa13.97□□□□□ -0.17
SH3RF1-205ENST00000511421 ABCB5Q2M3G0 1257 aa13.97□□□□□ -0.17
SH3RF1-205ENST00000511421 SLC44A5Q8NCS7 719 aa13.97□□□□□ -0.17
SH3RF1-205ENST00000511421 DYNLL2Q96FJ2 89 aa13.97□□□□□ -0.17
SH3RF1-205ENST00000511421 LNPKQ9C0E8 428 aa13.97□□□□□ -0.17
SH3RF1-205ENST00000511421 TAOK2Q9UL54 1235 aa13.97□□□□□ -0.17
SH3RF1-205ENST00000511421 HTTP42858 3142 aa13.96□□□□□ -0.17
SH3RF1-205ENST00000511421 GSG1L2A8MUP6 293 aa13.96□□□□□ -0.17
SH3RF1-205ENST00000511421 M0R2C6 588 aa13.96□□□□□ -0.17
SH3RF1-205ENST00000511421 ARHGEF6Q15052 776 aa13.96□□□□□ -0.17
SH3RF1-205ENST00000511421 CTR9Q6PD62 1173 aa13.96□□□□□ -0.17
SH3RF1-205ENST00000511421 SWAP70Q9UH65 585 aa13.96□□□□□ -0.17
SH3RF1-205ENST00000511421 LOC285556D6RIA3 1793 aa13.95□□□□□ -0.18
SH3RF1-205ENST00000511421 GPAA1O43292 621 aa13.95□□□□□ -0.18
SH3RF1-205ENST00000511421 KIF22Q14807 665 aa13.95□□□□□ -0.18
SH3RF1-205ENST00000511421 LRRFIP1Q32MZ4 808 aaKnown RBP13.95□□□□□ -0.18
SH3RF1-205ENST00000511421 B4GALNT3Q6L9W6 998 aa13.95□□□□□ -0.18
SH3RF1-205ENST00000511421 FSD1Q9BTV5 496 aa13.95□□□□□ -0.18
SH3RF1-205ENST00000511421 CABP5Q9NP86 173 aa13.95□□□□□ -0.18
SH3RF1-205ENST00000511421 EMILIN3Q9NT22 766 aa13.95□□□□□ -0.18
SH3RF1-205ENST00000511421 GNRH1P01148 92 aa13.95□□□□□ -0.18
SH3RF1-205ENST00000511421 HOXA7P31268 230 aaPredicted RBP13.95□□□□□ -0.18
SH3RF1-205ENST00000511421 PSMC4P43686 418 aa13.95□□□□□ -0.18
SH3RF1-205ENST00000511421 RGS19P49795 217 aa13.95□□□□□ -0.18
SH3RF1-205ENST00000511421 NUCB1Q02818 461 aa13.95□□□□□ -0.18
SH3RF1-205ENST00000511421 PABPC4Q13310 644 aaKnown RBP eCLIP13.95□□□□□ -0.18
SH3RF1-205ENST00000511421 SEPT2Q15019 361 aa13.95□□□□□ -0.18
SH3RF1-205ENST00000511421 RAB3GAP1Q15042 981 aa13.95□□□□□ -0.18
SH3RF1-205ENST00000511421 ZMYM1Q5SVZ6 1142 aa13.95□□□□□ -0.18
SH3RF1-205ENST00000511421 GIMAP6Q6P9H5 292 aa13.95□□□□□ -0.18
SH3RF1-205ENST00000511421 CHD1LQ86WJ1 897 aa13.95□□□□□ -0.18
SH3RF1-205ENST00000511421 ACER1Q8TDN7 264 aa13.95□□□□□ -0.18
SH3RF1-205ENST00000511421 SMCR8Q8TEV9 937 aaPredicted RBP13.95□□□□□ -0.18
SH3RF1-205ENST00000511421 DDRGK1Q96HY6 314 aa13.95□□□□□ -0.18
SH3RF1-205ENST00000511421 TRIM47Q96LD4 638 aa13.95□□□□□ -0.18
SH3RF1-205ENST00000511421 SEC62Q99442 399 aaKnown RBP13.95□□□□□ -0.18
SH3RF1-205ENST00000511421 ASCC2Q9H1I8 757 aaPredicted RBP13.95□□□□□ -0.18
SH3RF1-205ENST00000511421 TMOD4Q9NZQ9 345 aa13.95□□□□□ -0.18
SH3RF1-205ENST00000511421 PNMA3Q9UL41 463 aa13.95□□□□□ -0.18
SH3RF1-205ENST00000511421 BAZ2AQ9UIF9 1905 aaKnown RBP13.94□□□□□ -0.18
SH3RF1-205ENST00000511421 ZSWIM8A7E2V4 1837 aa13.94□□□□□ -0.18
SH3RF1-205ENST00000511421 ECM2O94769 699 aaPredicted RBP13.94□□□□□ -0.18
SH3RF1-205ENST00000511421 CDK8P49336 464 aa13.94□□□□□ -0.18
SH3RF1-205ENST00000511421 IRX6P78412 446 aaPredicted RBP13.94□□□□□ -0.18
SH3RF1-205ENST00000511421 SBK1Q52WX2 424 aa13.94□□□□□ -0.18
SH3RF1-205ENST00000511421 USP17L2Q6R6M4 530 aa13.94□□□□□ -0.18
SH3RF1-205ENST00000511421 C16orf86Q6ZW13 317 aa13.94□□□□□ -0.18
SH3RF1-205ENST00000511421 EVI5LQ96CN4 794 aa13.94□□□□□ -0.18
SH3RF1-205ENST00000511421 C12orf42Q96LP6 360 aa13.94□□□□□ -0.18
SH3RF1-205ENST00000511421 KIAA1683Q9H0B3 1180 aa13.94□□□□□ -0.18
SH3RF1-205ENST00000511421 EPB41L4AQ9HCS5 686 aaPredicted RBP13.94□□□□□ -0.18
SH3RF1-205ENST00000511421 PTCH2Q9Y6C5 1203 aa13.94□□□□□ -0.18
SH3RF1-205ENST00000511421 OSBPP22059 807 aa13.93□□□□□ -0.18
SH3RF1-205ENST00000511421 AMOTL1Q8IY63 956 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms