RNA–Protein interactions for RNA: ENST00000506909.5

PDCD6-204, Transcript of programmed cell death 6, humanhuman

TSL 3

Gene PDCD6, Length 458 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-204ENST00000506909 FASTKD5Q7L8L6 764 aaKnown RBP16.3■□□□□ 0.2
PDCD6-204ENST00000506909 PRRT2Q7Z6L0 340 aaPredicted RBP16.3■□□□□ 0.2
PDCD6-204ENST00000506909 ANKRD23Q86SG2 305 aa16.3■□□□□ 0.2
PDCD6-204ENST00000506909 DDRGK1Q96HY6 314 aa16.3■□□□□ 0.2
PDCD6-204ENST00000506909 GNAT2P19087 354 aa16.29■□□□□ 0.2
PDCD6-204ENST00000506909 CRHR2Q13324 411 aa16.29■□□□□ 0.2
PDCD6-204ENST00000506909 TAF1CQ15572 869 aaPredicted RBP16.29■□□□□ 0.2
PDCD6-204ENST00000506909 ZMYM1Q5SVZ6 1142 aa16.29■□□□□ 0.2
PDCD6-204ENST00000506909 GIMAP6Q6P9H5 292 aa16.29■□□□□ 0.2
PDCD6-204ENST00000506909 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.29■□□□□ 0.2
PDCD6-204ENST00000506909 GSG1L2A8MUP6 293 aa16.28■□□□□ 0.2
PDCD6-204ENST00000506909 USP17L12C9JPN9 530 aa16.28■□□□□ 0.2
PDCD6-204ENST00000506909 USP17L21D6R901 530 aa16.28■□□□□ 0.2
PDCD6-204ENST00000506909 GPAA1O43292 621 aa16.28■□□□□ 0.2
PDCD6-204ENST00000506909 FKTNO75072 461 aa16.28■□□□□ 0.2
PDCD6-204ENST00000506909 SHMT1P34896 483 aa16.28■□□□□ 0.2
PDCD6-204ENST00000506909 JAG1P78504 1218 aa16.28■□□□□ 0.2
PDCD6-204ENST00000506909 C12orf60Q5U649 245 aa16.28■□□□□ 0.2
PDCD6-204ENST00000506909 CCDC84Q86UT8 332 aaPredicted RBP16.28■□□□□ 0.2
PDCD6-204ENST00000506909 AMOTL1Q8IY63 956 aa16.28■□□□□ 0.2
PDCD6-204ENST00000506909 ZNF280CQ8ND82 737 aa16.28■□□□□ 0.2
PDCD6-204ENST00000506909 ZNF296Q8WUU4 475 aaPredicted RBP16.28■□□□□ 0.2
PDCD6-204ENST00000506909 WDR18Q9BV38 432 aa16.28■□□□□ 0.2
PDCD6-204ENST00000506909 AS3MTQ9HBK9 375 aa16.28■□□□□ 0.2
PDCD6-204ENST00000506909 ZFYVE28Q9HCC9 887 aa16.28■□□□□ 0.2
PDCD6-204ENST00000506909 ZBTB21Q9ULJ3 1066 aa16.28■□□□□ 0.2
PDCD6-204ENST00000506909 TRIM75PA6NK02 468 aa16.27■□□□□ 0.2
PDCD6-204ENST00000506909 M0R2C6 588 aa16.27■□□□□ 0.2
PDCD6-204ENST00000506909 GDF11O95390 407 aa16.27■□□□□ 0.2
PDCD6-204ENST00000506909 SPP2Q13103 211 aa16.27■□□□□ 0.2
PDCD6-204ENST00000506909 CERKLQ49MI3 558 aaPredicted RBP16.27■□□□□ 0.2
PDCD6-204ENST00000506909 SBK1Q52WX2 424 aa16.27■□□□□ 0.2
PDCD6-204ENST00000506909 GPAT2Q6NUI2 795 aa16.27■□□□□ 0.2
PDCD6-204ENST00000506909 CTR9Q6PD62 1173 aa16.27■□□□□ 0.2
PDCD6-204ENST00000506909 SEC62Q99442 399 aaKnown RBP16.27■□□□□ 0.2
PDCD6-204ENST00000506909 SWAP70Q9UH65 585 aa16.27■□□□□ 0.2
PDCD6-204ENST00000506909 TRIM6-TRIM34B2RNG4 842 aa16.26■□□□□ 0.19
PDCD6-204ENST00000506909 PATL2C9JE40 543 aaKnown RBP16.26■□□□□ 0.19
PDCD6-204ENST00000506909 PDHXO00330 501 aa16.26■□□□□ 0.19
PDCD6-204ENST00000506909 TLR2O60603 784 aa16.26■□□□□ 0.19
PDCD6-204ENST00000506909 CYP2D6P10635 497 aa16.26■□□□□ 0.19
PDCD6-204ENST00000506909 EVX2Q03828 476 aa16.26■□□□□ 0.19
PDCD6-204ENST00000506909 SH3D19Q5HYK7 790 aa16.26■□□□□ 0.19
PDCD6-204ENST00000506909 PROCA1Q8NCQ7 364 aaPredicted RBP16.26■□□□□ 0.19
PDCD6-204ENST00000506909 ARPP21Q9UBL0 812 aaPredicted RBP16.26■□□□□ 0.19
PDCD6-204ENST00000506909 SLC45A1Q9Y2W3 748 aa16.26■□□□□ 0.19
PDCD6-204ENST00000506909 MGAMO43451 1857 aa16.25■□□□□ 0.19
PDCD6-204ENST00000506909 GH2P01242 217 aa16.25■□□□□ 0.19
PDCD6-204ENST00000506909 ABCB5Q2M3G0 1257 aa16.25■□□□□ 0.19
PDCD6-204ENST00000506909 SHROOM1Q2M3G4 852 aaPredicted RBP16.25■□□□□ 0.19
PDCD6-204ENST00000506909 GADL1Q6ZQY3 521 aa16.25■□□□□ 0.19
PDCD6-204ENST00000506909 CABP5Q9NP86 173 aa16.25■□□□□ 0.19
PDCD6-204ENST00000506909 HELLSQ9NRZ9 838 aa16.25■□□□□ 0.19
PDCD6-204ENST00000506909 CYP2D7A0A087X1C5 515 aa16.24■□□□□ 0.19
PDCD6-204ENST00000506909 C19orf81C9J6K1 198 aa16.24■□□□□ 0.19
PDCD6-204ENST00000506909 USP17L10C9JJH3 530 aa16.24■□□□□ 0.19
PDCD6-204ENST00000506909 PDE4AP27815 886 aa16.24■□□□□ 0.19
PDCD6-204ENST00000506909 BACE1P56817 501 aa16.24■□□□□ 0.19
PDCD6-204ENST00000506909 SP3Q02447 781 aa16.24■□□□□ 0.19
PDCD6-204ENST00000506909 C16orf86Q6ZW13 317 aa16.24■□□□□ 0.19
PDCD6-204ENST00000506909 CTU1Q7Z7A3 348 aaKnown RBP16.24■□□□□ 0.19
PDCD6-204ENST00000506909 RILPL2Q969X0 211 aa16.24■□□□□ 0.19
PDCD6-204ENST00000506909 DYNLL2Q96FJ2 89 aa16.24■□□□□ 0.19
PDCD6-204ENST00000506909 AGTPBP1Q9UPW5 1226 aa16.24■□□□□ 0.19
PDCD6-204ENST00000506909 GREB1LQ9C091 1923 aaPredicted RBP16.23■□□□□ 0.19
PDCD6-204ENST00000506909 APPP05067 770 aa16.23■□□□□ 0.19
PDCD6-204ENST00000506909 CDK8P49336 464 aa16.23■□□□□ 0.19
PDCD6-204ENST00000506909 HMGCS2P54868 508 aa16.23■□□□□ 0.19
PDCD6-204ENST00000506909 DGKZQ13574 1117 aa16.23■□□□□ 0.19
PDCD6-204ENST00000506909 IFNL3Q8IZI9 196 aa16.23■□□□□ 0.19
PDCD6-204ENST00000506909 SLC44A5Q8NCS7 719 aa16.23■□□□□ 0.19
PDCD6-204ENST00000506909 CCDC17Q96LX7 622 aa16.23■□□□□ 0.19
PDCD6-204ENST00000506909 NACAP1Q9BZK3 213 aa16.23■□□□□ 0.19
PDCD6-204ENST00000506909 EPB41L4AQ9HCS5 686 aaPredicted RBP16.23■□□□□ 0.19
PDCD6-204ENST00000506909 ADGRA2Q96PE1 1338 aa16.22■□□□□ 0.19
PDCD6-204ENST00000506909 SMIM22K7EJ46 135 aa16.22■□□□□ 0.19
PDCD6-204ENST00000506909 GUCY1A2P33402 732 aa16.22■□□□□ 0.19
PDCD6-204ENST00000506909 MTMR2Q13614 643 aa16.22■□□□□ 0.19
PDCD6-204ENST00000506909 MCMDC2Q4G0Z9 681 aa16.22■□□□□ 0.19
PDCD6-204ENST00000506909 C17orf99Q6UX52 265 aa16.22■□□□□ 0.19
PDCD6-204ENST00000506909 ERO1AQ96HE7 468 aa16.22■□□□□ 0.19
PDCD6-204ENST00000506909 PARK7Q99497 189 aaKnown RBP16.22■□□□□ 0.19
PDCD6-204ENST00000506909 MCOLN1Q9GZU1 580 aa16.22■□□□□ 0.19
PDCD6-204ENST00000506909 ROBO3Q96MS0 1386 aa16.22■□□□□ 0.19
PDCD6-204ENST00000506909 PDE4DIPQ5VU43 2346 aa16.22■□□□□ 0.19
PDCD6-204ENST00000506909 DOCK3Q8IZD9 2030 aa16.21■□□□□ 0.19
PDCD6-204ENST00000506909 SDSP20132 328 aa16.21■□□□□ 0.19
PDCD6-204ENST00000506909 TDO2P48775 406 aa16.21■□□□□ 0.19
PDCD6-204ENST00000506909 PABPC4Q13310 644 aaKnown RBP eCLIP16.21■□□□□ 0.191e-7■■□□□ 12.2
PDCD6-204ENST00000506909 RAB3GAP1Q15042 981 aa16.21■□□□□ 0.19
PDCD6-204ENST00000506909 PKN2Q16513 984 aaKnown RBP16.21■□□□□ 0.19
PDCD6-204ENST00000506909 TREML2Q5T2D2 321 aa16.21■□□□□ 0.19
PDCD6-204ENST00000506909 TMEM179Q6ZVK1 233 aa16.21■□□□□ 0.19
PDCD6-204ENST00000506909 FAM227BQ96M60 508 aa16.21■□□□□ 0.19
PDCD6-204ENST00000506909 TMOD4Q9NZQ9 345 aa16.21■□□□□ 0.19
PDCD6-204ENST00000506909 MYH4Q9Y623 1939 aa16.21■□□□□ 0.19
PDCD6-204ENST00000506909 ZSWIM8A7E2V4 1837 aa16.2■□□□□ 0.18
PDCD6-204ENST00000506909 A0A0D9SFI3 127 aa16.2■□□□□ 0.18
PDCD6-204ENST00000506909 MINDY4BA8MYZ0 360 aa16.2■□□□□ 0.18
PDCD6-204ENST00000506909 HIP1O00291 1037 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms