RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 NSUN7Q8NE18 718 aaKnown RBP8.12□□□□□ -1.11
TOPBP1-203ENST00000503464 SMARCC2Q8TAQ2 1214 aa8.12□□□□□ -1.11
TOPBP1-203ENST00000503464 ESR2Q92731 530 aa8.12□□□□□ -1.11
TOPBP1-203ENST00000503464 MTA3Q9BTC8 594 aa8.12□□□□□ -1.11
TOPBP1-203ENST00000503464 MYL10Q9BUA6 226 aa8.12□□□□□ -1.11
TOPBP1-203ENST00000503464 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.12□□□□□ -1.11
TOPBP1-203ENST00000503464 TDRD3Q9H7E2 651 aaKnown RBP8.12□□□□□ -1.11
TOPBP1-203ENST00000503464 CWC22Q9HCG8 908 aaKnown RBP8.12□□□□□ -1.11
TOPBP1-203ENST00000503464 IL17RBQ9NRM6 502 aa8.12□□□□□ -1.11
TOPBP1-203ENST00000503464 TOMM22Q9NS69 142 aa8.12□□□□□ -1.11
TOPBP1-203ENST00000503464 ATAD5Q96QE3 1844 aa8.12□□□□□ -1.11
TOPBP1-203ENST00000503464 ATRNL1Q5VV63 1379 aa8.11□□□□□ -1.11
TOPBP1-203ENST00000503464 PLIN4Q96Q06 1357 aa8.11□□□□□ -1.11
TOPBP1-203ENST00000503464 IFIT3O14879 490 aaKnown RBP8.11□□□□□ -1.11
TOPBP1-203ENST00000503464 RANBP6O60518 1105 aaKnown RBP8.11□□□□□ -1.11
TOPBP1-203ENST00000503464 BRD1O95696 1058 aa8.11□□□□□ -1.11
TOPBP1-203ENST00000503464 POLR3DP05423 398 aaPredicted RBP8.11□□□□□ -1.11
TOPBP1-203ENST00000503464 FDPSP14324 419 aaKnown RBP8.11□□□□□ -1.11
TOPBP1-203ENST00000503464 RXRAP19793 462 aa8.11□□□□□ -1.11
TOPBP1-203ENST00000503464 GJB2P29033 226 aa8.11□□□□□ -1.11
TOPBP1-203ENST00000503464 CDC27P30260 824 aa8.11□□□□□ -1.11
TOPBP1-203ENST00000503464 SHMT1P34896 483 aa8.11□□□□□ -1.11
TOPBP1-203ENST00000503464 CDK8P49336 464 aa8.11□□□□□ -1.11
TOPBP1-203ENST00000503464 GMPSP49915 693 aaPredicted RBP8.11□□□□□ -1.11
TOPBP1-203ENST00000503464 RBM5P52756 815 aaKnown RBP eCLIP8.11□□□□□ -1.11
TOPBP1-203ENST00000503464 FGD1P98174 961 aa8.11□□□□□ -1.11
TOPBP1-203ENST00000503464 CDAN1Q8IWY9 1227 aa8.11□□□□□ -1.11
TOPBP1-203ENST00000503464 JDP2Q8WYK2 163 aa8.11□□□□□ -1.11
TOPBP1-203ENST00000503464 TNPO1Q92973 898 aaKnown RBP8.11□□□□□ -1.11
TOPBP1-203ENST00000503464 CHAMP1Q96JM3 812 aa8.11□□□□□ -1.11
TOPBP1-203ENST00000503464 ZSCAN10Q96SZ4 725 aaPredicted RBP8.11□□□□□ -1.11
TOPBP1-203ENST00000503464 PGAP2Q9UHJ9 254 aa8.11□□□□□ -1.11
TOPBP1-203ENST00000503464 PAPPA2Q9BXP8 1791 aa8.1□□□□□ -1.11
TOPBP1-203ENST00000503464 ASTN2O75129 1339 aaPredicted RBP8.1□□□□□ -1.11
TOPBP1-203ENST00000503464 POLR2AP24928 1970 aaKnown RBP8.1□□□□□ -1.11
TOPBP1-203ENST00000503464 IGKV6D-41A0A0C4DH26 115 aa8.1□□□□□ -1.11
TOPBP1-203ENST00000503464 CLRN2A0PK11 232 aa8.1□□□□□ -1.11
TOPBP1-203ENST00000503464 PTPDC1A2A3K4 754 aa8.1□□□□□ -1.11
TOPBP1-203ENST00000503464 PPFIA3O75145 1194 aa8.1□□□□□ -1.11
TOPBP1-203ENST00000503464 SLC3A2P08195 630 aaKnown RBP8.1□□□□□ -1.11
TOPBP1-203ENST00000503464 LMNB1P20700 586 aa8.1□□□□□ -1.11
TOPBP1-203ENST00000503464 SYT1P21579 422 aa8.1□□□□□ -1.11
TOPBP1-203ENST00000503464 RPS12P25398 132 aaKnown RBP8.1□□□□□ -1.11
TOPBP1-203ENST00000503464 NOVP48745 357 aa8.1□□□□□ -1.11
TOPBP1-203ENST00000503464 TFAP4Q01664 338 aa8.1□□□□□ -1.11
TOPBP1-203ENST00000503464 PDE4BQ07343 736 aa8.1□□□□□ -1.11
TOPBP1-203ENST00000503464 TCP10Q12799 353 aa8.1□□□□□ -1.11
TOPBP1-203ENST00000503464 WTAPQ15007 396 aa8.1□□□□□ -1.11
TOPBP1-203ENST00000503464 TNIP1Q15025 636 aa8.1□□□□□ -1.11
TOPBP1-203ENST00000503464 NTRK3Q16288 839 aa8.1□□□□□ -1.11
TOPBP1-203ENST00000503464 SHROOM1Q2M3G4 852 aaPredicted RBP8.1□□□□□ -1.11
TOPBP1-203ENST00000503464 ARHGAP27Q6ZUM4 889 aa8.1□□□□□ -1.11
TOPBP1-203ENST00000503464 METTL16Q86W50 562 aaKnown RBP8.1□□□□□ -1.11
TOPBP1-203ENST00000503464 LLPHQ9BRT6 129 aaKnown RBP8.1□□□□□ -1.11
TOPBP1-203ENST00000503464 EHD4Q9H223 541 aa8.1□□□□□ -1.11
TOPBP1-203ENST00000503464 MYOZ2Q9NPC6 264 aa8.1□□□□□ -1.11
TOPBP1-203ENST00000503464 ZNF70Q9UC06 446 aaPredicted RBP8.1□□□□□ -1.11
TOPBP1-203ENST00000503464 SMC3Q9UQE7 1217 aa8.1□□□□□ -1.11
TOPBP1-203ENST00000503464 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.1□□□□□ -1.11
TOPBP1-203ENST00000503464 FAM196BA6NMK8 535 aa8.09□□□□□ -1.11
TOPBP1-203ENST00000503464 UBE2Q2LH0YL09 131 aa8.09□□□□□ -1.11
TOPBP1-203ENST00000503464 WNT10BO00744 389 aa8.09□□□□□ -1.11
TOPBP1-203ENST00000503464 ZBTB43O43298 467 aa8.09□□□□□ -1.11
TOPBP1-203ENST00000503464 ENTPD3O75355 529 aa8.09□□□□□ -1.11
TOPBP1-203ENST00000503464 AKR1B1P15121 316 aa8.09□□□□□ -1.11
TOPBP1-203ENST00000503464 ADD1P35611 737 aaKnown RBP8.09□□□□□ -1.11
TOPBP1-203ENST00000503464 JAG1P78504 1218 aa8.09□□□□□ -1.11
TOPBP1-203ENST00000503464 TROAPQ12815 778 aa8.09□□□□□ -1.11
TOPBP1-203ENST00000503464 RRP1BQ14684 758 aaKnown RBP8.09□□□□□ -1.11
TOPBP1-203ENST00000503464 DLGAP5Q15398 846 aa8.09□□□□□ -1.11
TOPBP1-203ENST00000503464 NFKBIBQ15653 356 aa8.09□□□□□ -1.11
TOPBP1-203ENST00000503464 NBPF9Q3BBW0 867 aa8.09□□□□□ -1.11
TOPBP1-203ENST00000503464 CLEC17AQ6ZS10 378 aa8.09□□□□□ -1.11
TOPBP1-203ENST00000503464 MICU3Q86XE3 530 aa8.09□□□□□ -1.11
TOPBP1-203ENST00000503464 MICALL2Q8IY33 904 aa8.09□□□□□ -1.11
TOPBP1-203ENST00000503464 CCDC144CPQ8IYA2 1237 aa8.09□□□□□ -1.11
TOPBP1-203ENST00000503464 ZNF654Q8IZM8 581 aa8.09□□□□□ -1.11
TOPBP1-203ENST00000503464 NEDD1Q8NHV4 660 aa8.09□□□□□ -1.11
TOPBP1-203ENST00000503464 ANKS1AQ92625 1134 aa8.09□□□□□ -1.11
TOPBP1-203ENST00000503464 UBAC1Q9BSL1 405 aa8.09□□□□□ -1.11
TOPBP1-203ENST00000503464 TCP11L1Q9NUJ3 509 aa8.09□□□□□ -1.11
TOPBP1-203ENST00000503464 SERPINB13Q9UIV8 391 aa8.09□□□□□ -1.11
TOPBP1-203ENST00000503464 HDAC9Q9UKV0 1011 aa8.09□□□□□ -1.11
TOPBP1-203ENST00000503464 NAP1L2Q9ULW6 460 aaPredicted RBP8.09□□□□□ -1.11
TOPBP1-203ENST00000503464 MTMR6Q9Y217 621 aa8.09□□□□□ -1.11
TOPBP1-203ENST00000503464 SRCAPQ6ZRS2 3230 aa8.08□□□□□ -1.12
TOPBP1-203ENST00000503464 CCDC69A6NI79 296 aa8.08□□□□□ -1.12
TOPBP1-203ENST00000503464 TSPY2A6NKD2 308 aa8.08□□□□□ -1.12
TOPBP1-203ENST00000503464 GOLGA8AA7E2F4 631 aa8.08□□□□□ -1.12
TOPBP1-203ENST00000503464 TCP10L2B9ZVM9 353 aa8.08□□□□□ -1.12
TOPBP1-203ENST00000503464 NT5C2P49902 561 aa8.08□□□□□ -1.12
TOPBP1-203ENST00000503464 METAP2P50579 478 aaKnown RBP eCLIP8.08□□□□□ -1.12
TOPBP1-203ENST00000503464 RCAN1P53805 252 aa8.08□□□□□ -1.12
TOPBP1-203ENST00000503464 EIF6P56537 245 aaKnown RBP8.08□□□□□ -1.12
TOPBP1-203ENST00000503464 NUCB2P80303 420 aa8.08□□□□□ -1.12
TOPBP1-203ENST00000503464 FUT2Q10981 343 aa8.08□□□□□ -1.12
TOPBP1-203ENST00000503464 SART3Q15020 963 aaKnown RBP8.08□□□□□ -1.12
TOPBP1-203ENST00000503464 FOXD4L5Q5VV16 416 aaPredicted RBP8.08□□□□□ -1.12
TOPBP1-203ENST00000503464 NFXL1Q6ZNB6 911 aa8.08□□□□□ -1.12
TOPBP1-203ENST00000503464 CDC37L1Q7L3B6 337 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms