RNA–Protein interactions for RNA: ENST00000498607.2

SCG5-209, Transcript of secretogranin V, humanhuman

TSL 2

Gene SCG5, Length 853 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG5-209ENST00000498607 PDRG1Q9NUG6 133 aa13.77□□□□□ -0.21
SCG5-209ENST00000498607 SWAP70Q9UH65 585 aa13.77□□□□□ -0.21
SCG5-209ENST00000498607 SERPINB13Q9UIV8 391 aa13.77□□□□□ -0.21
SCG5-209ENST00000498607 KDM4AO75164 1064 aa13.76□□□□□ -0.21
SCG5-209ENST00000498607 EPHX2P34913 555 aa13.76□□□□□ -0.21
SCG5-209ENST00000498607 CDK8P49336 464 aa13.76□□□□□ -0.21
SCG5-209ENST00000498607 ANTXR2P58335 489 aa13.76□□□□□ -0.21
SCG5-209ENST00000498607 EXOSC10Q01780 885 aaKnown RBP13.76□□□□□ -0.21
SCG5-209ENST00000498607 NBR1Q14596 966 aa13.76□□□□□ -0.21
SCG5-209ENST00000498607 RRP12Q5JTH9 1297 aaKnown RBP13.76□□□□□ -0.21
SCG5-209ENST00000498607 USP50Q70EL3 339 aaPredicted RBP13.76□□□□□ -0.21
SCG5-209ENST00000498607 FOXP4Q8IVH2 680 aaPredicted RBP13.76□□□□□ -0.21
SCG5-209ENST00000498607 ALDH8A1Q9H2A2 487 aaPredicted RBP13.76□□□□□ -0.21
SCG5-209ENST00000498607 GGA3Q9NZ52 723 aa13.76□□□□□ -0.21
SCG5-209ENST00000498607 PI4KBQ9UBF8 816 aa13.76□□□□□ -0.21
SCG5-209ENST00000498607 POLR2AP24928 1970 aaKnown RBP13.76□□□□□ -0.21
SCG5-209ENST00000498607 PRC1O43663 620 aa13.75□□□□□ -0.21
SCG5-209ENST00000498607 PRDM1O75626 825 aa13.75□□□□□ -0.21
SCG5-209ENST00000498607 CD2BP2O95400 341 aaKnown RBP13.75□□□□□ -0.21
SCG5-209ENST00000498607 RASA1P20936 1047 aa13.75□□□□□ -0.21
SCG5-209ENST00000498607 MCM2P49736 904 aa13.75□□□□□ -0.21
SCG5-209ENST00000498607 RASA3Q14644 834 aa13.75□□□□□ -0.21
SCG5-209ENST00000498607 ANGEL2Q5VTE6 544 aaKnown RBP13.75□□□□□ -0.21
SCG5-209ENST00000498607 CYB5R4Q7L1T6 521 aa13.75□□□□□ -0.21
SCG5-209ENST00000498607 METTL16Q86W50 562 aaKnown RBP13.75□□□□□ -0.21
SCG5-209ENST00000498607 HSCBQ8IWL3 235 aa13.75□□□□□ -0.21
SCG5-209ENST00000498607 CRACR2BQ8N4Y2 399 aaPredicted RBP13.75□□□□□ -0.21
SCG5-209ENST00000498607 SLC44A5Q8NCS7 719 aa13.75□□□□□ -0.21
SCG5-209ENST00000498607 CSRNP1Q96S65 589 aa13.75□□□□□ -0.21
SCG5-209ENST00000498607 MTA3Q9BTC8 594 aa13.75□□□□□ -0.21
SCG5-209ENST00000498607 TMEM39BQ9GZU3 492 aa13.75□□□□□ -0.21
SCG5-209ENST00000498607 TAF1DQ9H5J8 278 aaPredicted RBP13.75□□□□□ -0.21
SCG5-209ENST00000498607 MKNK2Q9HBH9 465 aa13.75□□□□□ -0.21
SCG5-209ENST00000498607 RANBP6O60518 1105 aaKnown RBP13.74□□□□□ -0.21
SCG5-209ENST00000498607 AK2P54819 239 aa13.74□□□□□ -0.21
SCG5-209ENST00000498607 BECN1Q14457 450 aa13.74□□□□□ -0.21
SCG5-209ENST00000498607 ANKRD1Q15327 319 aa13.74□□□□□ -0.21
SCG5-209ENST00000498607 IFNL1Q8IU54 200 aa13.74□□□□□ -0.21
SCG5-209ENST00000498607 FBXL16Q8N461 479 aa13.74□□□□□ -0.21
SCG5-209ENST00000498607 NKX2-3Q8TAU0 364 aa13.74□□□□□ -0.21
SCG5-209ENST00000498607 KIF12Q96FN5 646 aa13.74□□□□□ -0.21
SCG5-209ENST00000498607 TMEM87BQ96K49 555 aa13.74□□□□□ -0.21
SCG5-209ENST00000498607 TCEANC2Q96MN5 208 aa13.74□□□□□ -0.21
SCG5-209ENST00000498607 TRIM34Q9BYJ4 488 aa13.74□□□□□ -0.21
SCG5-209ENST00000498607 AGXT2Q9BYV1 514 aa13.74□□□□□ -0.21
SCG5-209ENST00000498607 ZSWIM5Q9P217 1185 aa13.74□□□□□ -0.21
SCG5-209ENST00000498607 PGAP2Q9UHJ9 254 aa13.74□□□□□ -0.21
SCG5-209ENST00000498607 HERC5Q9UII4 1024 aaKnown RBP13.74□□□□□ -0.21
SCG5-209ENST00000498607 PPP2R3BQ9Y5P8 575 aa13.74□□□□□ -0.21
SCG5-209ENST00000498607 GREB1LQ9C091 1923 aaPredicted RBP13.74□□□□□ -0.21
SCG5-209ENST00000498607 PLIN4Q96Q06 1357 aa13.73□□□□□ -0.21
SCG5-209ENST00000498607 GOLGB1Q14789 3259 aaKnown RBP13.73□□□□□ -0.21
SCG5-209ENST00000498607 POTECB2RU33 542 aa13.73□□□□□ -0.21
SCG5-209ENST00000498607 SHMT1P34896 483 aa13.73□□□□□ -0.21
SCG5-209ENST00000498607 Q6ZUG5 572 aa13.73□□□□□ -0.21
SCG5-209ENST00000498607 PNMA8AQ86V59 439 aaPredicted RBP13.73□□□□□ -0.21
SCG5-209ENST00000498607 ZNF444Q8N0Y2 327 aaPredicted RBP13.73□□□□□ -0.21
SCG5-209ENST00000498607 ZC3H15Q8WU90 426 aaKnown RBP13.73□□□□□ -0.21
SCG5-209ENST00000498607 TEPSINQ96N21 525 aa13.73□□□□□ -0.21
SCG5-209ENST00000498607 TBC1D2Q9BYX2 928 aa13.73□□□□□ -0.21
SCG5-209ENST00000498607 DEFB129Q9H1M3 183 aa13.73□□□□□ -0.21
SCG5-209ENST00000498607 DNAJC18Q9H819 358 aa13.73□□□□□ -0.21
SCG5-209ENST00000498607 TSPY2A6NKD2 308 aa13.72□□□□□ -0.21
SCG5-209ENST00000498607 K7ELQ4 463 aaPredicted RBP13.72□□□□□ -0.21
SCG5-209ENST00000498607 TBC1D12O60347 775 aa13.72□□□□□ -0.21
SCG5-209ENST00000498607 FGD1P98174 961 aa13.72□□□□□ -0.21
SCG5-209ENST00000498607 TOB2Q14106 344 aaPredicted RBP13.72□□□□□ -0.21
SCG5-209ENST00000498607 SART3Q15020 963 aaKnown RBP13.72□□□□□ -0.21
SCG5-209ENST00000498607 CHST3Q7LGC8 479 aa13.72□□□□□ -0.21
SCG5-209ENST00000498607 IQCA1Q86XH1 822 aa13.72□□□□□ -0.21
SCG5-209ENST00000498607 DCPSQ96C86 337 aaKnown RBP13.72□□□□□ -0.21
SCG5-209ENST00000498607 HOOK2Q96ED9 719 aa13.72□□□□□ -0.21
SCG5-209ENST00000498607 CCDC17Q96LX7 622 aa13.72□□□□□ -0.21
SCG5-209ENST00000498607 UBAC1Q9BSL1 405 aa13.72□□□□□ -0.21
SCG5-209ENST00000498607 LRRC2Q9BYS8 371 aa13.72□□□□□ -0.21
SCG5-209ENST00000498607 ANGEL1Q9UNK9 670 aaKnown RBP13.72□□□□□ -0.21
SCG5-209ENST00000498607 LIMCH1Q9UPQ0 1083 aa13.72□□□□□ -0.21
SCG5-209ENST00000498607 SH2B2O14492 632 aaPredicted RBP13.71□□□□□ -0.21
SCG5-209ENST00000498607 IFIT3O14879 490 aaKnown RBP13.71□□□□□ -0.21
SCG5-209ENST00000498607 MAP3K13O43283 966 aa13.71□□□□□ -0.21
SCG5-209ENST00000498607 TSPY3P0CV98 308 aa13.71□□□□□ -0.21
SCG5-209ENST00000498607 TSPY8P0CW00 308 aa13.71□□□□□ -0.21
SCG5-209ENST00000498607 VEGFAP15692 232 aaPredicted RBP13.71□□□□□ -0.21
SCG5-209ENST00000498607 TFAP4Q01664 338 aa13.71□□□□□ -0.21
SCG5-209ENST00000498607 MAP3K10Q02779 954 aa13.71□□□□□ -0.21
SCG5-209ENST00000498607 TPRNQ4KMQ1 711 aa13.71□□□□□ -0.21
SCG5-209ENST00000498607 CCDC178Q5BJE1 867 aa13.71□□□□□ -0.21
SCG5-209ENST00000498607 TMEM67Q5HYA8 995 aa13.71□□□□□ -0.21
SCG5-209ENST00000498607 FAM47AQ5JRC9 791 aa13.71□□□□□ -0.21
SCG5-209ENST00000498607 TATDN1Q6P1N9 297 aa13.71□□□□□ -0.21
SCG5-209ENST00000498607 NOL8Q76FK4 1167 aaKnown RBP13.71□□□□□ -0.21
SCG5-209ENST00000498607 SULF1Q8IWU6 871 aa13.71□□□□□ -0.21
SCG5-209ENST00000498607 CDAN1Q8IWY9 1227 aa13.71□□□□□ -0.21
SCG5-209ENST00000498607 NEDD1Q8NHV4 660 aa13.71□□□□□ -0.21
SCG5-209ENST00000498607 IGDCC4Q8TDY8 1250 aa13.71□□□□□ -0.21
SCG5-209ENST00000498607 BRF1Q92994 677 aa13.71□□□□□ -0.21
SCG5-209ENST00000498607 ZSCAN10Q96SZ4 725 aaPredicted RBP13.71□□□□□ -0.21
SCG5-209ENST00000498607 MFRPQ9BY79 579 aa13.71□□□□□ -0.21
SCG5-209ENST00000498607 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.71□□□□□ -0.21
SCG5-209ENST00000498607 TCP11L1Q9NUJ3 509 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms