RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 TJP2Q9UDY2 1190 aa6.94□□□□□ -1.3
HMGN1-218ENST00000490032 ADAMTS6Q9UKP5 1117 aa6.94□□□□□ -1.3
HMGN1-218ENST00000490032 CNTNAP4Q9C0A0 1308 aa6.94□□□□□ -1.3
HMGN1-218ENST00000490032 PAPLNO95428 1278 aa6.93□□□□□ -1.3
HMGN1-218ENST00000490032 RNASE1P07998 156 aaKnown RBP6.93□□□□□ -1.3
HMGN1-218ENST00000490032 LMNB2Q03252 620 aa6.93□□□□□ -1.3
HMGN1-218ENST00000490032 SFRP5Q5T4F7 317 aa6.93□□□□□ -1.3
HMGN1-218ENST00000490032 LETMD1Q6P1Q0 360 aa6.93□□□□□ -1.3
HMGN1-218ENST00000490032 KRTAP19-1Q8IUB9 90 aa6.93□□□□□ -1.3
HMGN1-218ENST00000490032 RIN3Q8TB24 985 aa6.93□□□□□ -1.3
HMGN1-218ENST00000490032 RHOVQ96L33 236 aa6.93□□□□□ -1.3
HMGN1-218ENST00000490032 MRS2Q9HD23 443 aa6.93□□□□□ -1.3
HMGN1-218ENST00000490032 MBNL3Q9NUK0 354 aaKnown RBP6.93□□□□□ -1.3
HMGN1-218ENST00000490032 VTI1BQ9UEU0 232 aa6.93□□□□□ -1.3
HMGN1-218ENST00000490032 ADAM30Q9UKF2 790 aa6.93□□□□□ -1.3
HMGN1-218ENST00000490032 PITPNM2Q9BZ72 1349 aa6.93□□□□□ -1.3
HMGN1-218ENST00000490032 FAM221AA4D161 298 aa6.92□□□□□ -1.3
HMGN1-218ENST00000490032 PRR33A8MZF0 331 aa6.92□□□□□ -1.3
HMGN1-218ENST00000490032 CILPO75339 1184 aa6.92□□□□□ -1.3
HMGN1-218ENST00000490032 PGRP06401 933 aa6.92□□□□□ -1.3
HMGN1-218ENST00000490032 PDE4BQ07343 736 aa6.92□□□□□ -1.3
HMGN1-218ENST00000490032 SLC6A19Q695T7 634 aa6.92□□□□□ -1.3
HMGN1-218ENST00000490032 ZNF746Q6NUN9 644 aaPredicted RBP6.92□□□□□ -1.3
HMGN1-218ENST00000490032 SLC23A3Q6PIS1 610 aa6.92□□□□□ -1.3
HMGN1-218ENST00000490032 MCATQ8IVS2 390 aaKnown RBP6.92□□□□□ -1.3
HMGN1-218ENST00000490032 JARID2Q92833 1246 aaPredicted RBP6.92□□□□□ -1.3
HMGN1-218ENST00000490032 ASIC4Q96FT7 647 aa6.92□□□□□ -1.3
HMGN1-218ENST00000490032 TMEM87BQ96K49 555 aa6.92□□□□□ -1.3
HMGN1-218ENST00000490032 COX4I2Q96KJ9 171 aa6.92□□□□□ -1.3
HMGN1-218ENST00000490032 GOLGA2P5Q9HBQ8 144 aa6.92□□□□□ -1.3
HMGN1-218ENST00000490032 TPX2Q9ULW0 747 aaKnown RBP6.92□□□□□ -1.3
HMGN1-218ENST00000490032 CAMK2GQ13555 558 aaPredicted RBP6.91□□□□□ -1.3
HMGN1-218ENST00000490032 BNC2Q6ZN30 1099 aaPredicted RBP6.91□□□□□ -1.3
HMGN1-218ENST00000490032 ATG4DQ86TL0 474 aaPredicted RBP6.91□□□□□ -1.3
HMGN1-218ENST00000490032 MFSD4AQ8N468 514 aa6.91□□□□□ -1.3
HMGN1-218ENST00000490032 PI4K2BQ8TCG2 481 aa6.91□□□□□ -1.3
HMGN1-218ENST00000490032 GATAD2BQ8WXI9 593 aa6.91□□□□□ -1.3
HMGN1-218ENST00000490032 ACSF2Q96CM8 615 aaPredicted RBP6.91□□□□□ -1.3
HMGN1-218ENST00000490032 TMEM74Q96NL1 305 aa6.91□□□□□ -1.3
HMGN1-218ENST00000490032 RC3H2Q9HBD1 1191 aaKnown RBP6.91□□□□□ -1.3
HMGN1-218ENST00000490032 SEMA3GQ9NS98 782 aa6.91□□□□□ -1.3
HMGN1-218ENST00000490032 CAPN6Q9Y6Q1 641 aa6.91□□□□□ -1.3
HMGN1-218ENST00000490032 BIN1O00499 593 aa6.9□□□□□ -1.3
HMGN1-218ENST00000490032 PF4P02776 101 aa6.9□□□□□ -1.3
HMGN1-218ENST00000490032 PWP1Q13610 501 aa6.9□□□□□ -1.3
HMGN1-218ENST00000490032 DIEXFQ68CQ4 756 aaKnown RBP6.9□□□□□ -1.3
HMGN1-218ENST00000490032 RELL1Q8IUW5 271 aa6.9□□□□□ -1.3
HMGN1-218ENST00000490032 LRRN4CLQ8ND94 238 aa6.9□□□□□ -1.3
HMGN1-218ENST00000490032 F13A1P00488 732 aa6.89□□□□□ -1.31
HMGN1-218ENST00000490032 CYP7A1P22680 504 aa6.89□□□□□ -1.31
HMGN1-218ENST00000490032 TMEM201Q5SNT2 666 aa6.89□□□□□ -1.31
HMGN1-218ENST00000490032 XAGE3Q8WTP9 111 aa6.89□□□□□ -1.31
HMGN1-218ENST00000490032 HSPA12BQ96MM6 686 aa6.89□□□□□ -1.31
HMGN1-218ENST00000490032 DPH2Q9BQC3 489 aaPredicted RBP6.89□□□□□ -1.31
HMGN1-218ENST00000490032 LMCD1Q9NZU5 365 aa6.89□□□□□ -1.31
HMGN1-218ENST00000490032 ST14Q9Y5Y6 855 aa6.89□□□□□ -1.31
HMGN1-218ENST00000490032 PRR36Q9H6K5 1346 aa6.89□□□□□ -1.31
HMGN1-218ENST00000490032 FAM155AB1AL88 458 aaPredicted RBP6.88□□□□□ -1.31
HMGN1-218ENST00000490032 F6X3S4 739 aa6.88□□□□□ -1.31
HMGN1-218ENST00000490032 BPNT1O95861 308 aa6.88□□□□□ -1.31
HMGN1-218ENST00000490032 GBP2P32456 591 aaPredicted RBP6.88□□□□□ -1.31
HMGN1-218ENST00000490032 KIR3DL1P43629 444 aa6.88□□□□□ -1.31
HMGN1-218ENST00000490032 ZP2Q05996 745 aa6.88□□□□□ -1.31
HMGN1-218ENST00000490032 IKZF1Q13422 519 aa6.88□□□□□ -1.31
HMGN1-218ENST00000490032 ERMP1Q7Z2K6 904 aa6.88□□□□□ -1.31
HMGN1-218ENST00000490032 CDH24Q86UP0 819 aa6.88□□□□□ -1.31
HMGN1-218ENST00000490032 DNAJB8Q8NHS0 232 aa6.88□□□□□ -1.31
HMGN1-218ENST00000490032 BCL2L13Q9BXK5 485 aa6.88□□□□□ -1.31
HMGN1-218ENST00000490032 CORINQ9Y5Q5 1042 aa6.88□□□□□ -1.31
HMGN1-218ENST00000490032 CARMIL2Q6F5E8 1435 aa6.87□□□□□ -1.31
HMGN1-218ENST00000490032 GARTP22102 1010 aa6.87□□□□□ -1.31
HMGN1-218ENST00000490032 ETV3P41162 512 aa6.87□□□□□ -1.31
HMGN1-218ENST00000490032 MRPL58Q14197 206 aaKnown RBP6.87□□□□□ -1.31
HMGN1-218ENST00000490032 THAP5Q7Z6K1 395 aa6.87□□□□□ -1.31
HMGN1-218ENST00000490032 FLAD1Q8NFF5 587 aa6.87□□□□□ -1.31
HMGN1-218ENST00000490032 KCNQ5Q9NR82 932 aa6.87□□□□□ -1.31
HMGN1-218ENST00000490032 PLCG1P19174 1290 aa6.86□□□□□ -1.31
HMGN1-218ENST00000490032 TNK2Q07912 1038 aa6.86□□□□□ -1.31
HMGN1-218ENST00000490032 ZNF326Q5BKZ1 582 aaKnown RBP6.86□□□□□ -1.31
HMGN1-218ENST00000490032 CDKAL1Q5VV42 579 aa6.86□□□□□ -1.31
HMGN1-218ENST00000490032 PIWIL2Q8TC59 973 aaKnown RBP6.86□□□□□ -1.31
HMGN1-218ENST00000490032 GIPC2Q8TF65 315 aa6.86□□□□□ -1.31
HMGN1-218ENST00000490032 PPP1R13LQ8WUF5 828 aa6.86□□□□□ -1.31
HMGN1-218ENST00000490032 CYB5D2Q8WUJ1 264 aa6.86□□□□□ -1.31
HMGN1-218ENST00000490032 ATP13A1Q9HD20 1204 aa6.86□□□□□ -1.31
HMGN1-218ENST00000490032 PRDM7Q9NQW5 492 aa6.86□□□□□ -1.31
HMGN1-218ENST00000490032 CEP131Q9UPN4 1083 aa6.86□□□□□ -1.31
HMGN1-218ENST00000490032 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.86□□□□□ -1.31
HMGN1-218ENST00000490032 H3BS24 57 aa6.85□□□□□ -1.31
HMGN1-218ENST00000490032 CBX7O95931 251 aa6.85□□□□□ -1.31
HMGN1-218ENST00000490032 MPP2Q14168 576 aa6.85□□□□□ -1.31
HMGN1-218ENST00000490032 LCE3BQ5TA77 95 aa6.85□□□□□ -1.31
HMGN1-218ENST00000490032 OGFOD2Q6N063 350 aa6.85□□□□□ -1.31
HMGN1-218ENST00000490032 KRTAP1-3Q8IUG1 177 aa6.85□□□□□ -1.31
HMGN1-218ENST00000490032 SLFN12Q8IYM2 578 aa6.85□□□□□ -1.31
HMGN1-218ENST00000490032 POU5F2Q8N7G0 328 aa6.85□□□□□ -1.31
HMGN1-218ENST00000490032 KBTBD4Q9NVX7 518 aa6.85□□□□□ -1.31
HMGN1-218ENST00000490032 POLR3KQ9Y2Y1 108 aaPredicted RBP6.85□□□□□ -1.31
HMGN1-218ENST00000490032 MINDY4BA8MYZ0 360 aa6.84□□□□□ -1.31
HMGN1-218ENST00000490032 UPK3BL1B0FP48 263 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms