RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 AGTPBP1Q9UPW5 1226 aa12.71□□□□□ -0.37
SCAMP4-208ENST00000489554 FOCADQ5VW36 1801 aa12.7□□□□□ -0.38
SCAMP4-208ENST00000489554 TCRBV5S4A2TA0A5A2 114 aa12.7□□□□□ -0.38
SCAMP4-208ENST00000489554 ERC2O15083 957 aa12.7□□□□□ -0.38
SCAMP4-208ENST00000489554 SOX10P56693 466 aa12.7□□□□□ -0.38
SCAMP4-208ENST00000489554 SPP2Q13103 211 aa12.7□□□□□ -0.38
SCAMP4-208ENST00000489554 RRP1BQ14684 758 aaKnown RBP12.7□□□□□ -0.38
SCAMP4-208ENST00000489554 CCDC84Q86UT8 332 aaPredicted RBP12.7□□□□□ -0.38
SCAMP4-208ENST00000489554 CPA4Q9UI42 421 aa12.7□□□□□ -0.38
SCAMP4-208ENST00000489554 SERPINB13Q9UIV8 391 aa12.7□□□□□ -0.38
SCAMP4-208ENST00000489554 CYP2C8P10632 490 aa12.69□□□□□ -0.38
SCAMP4-208ENST00000489554 ADD2P35612 726 aa12.69□□□□□ -0.38
SCAMP4-208ENST00000489554 PRMT2P55345 433 aa12.69□□□□□ -0.38
SCAMP4-208ENST00000489554 CAP1Q01518 475 aa12.69□□□□□ -0.38
SCAMP4-208ENST00000489554 PABPC4Q13310 644 aaKnown RBP eCLIP12.69□□□□□ -0.38
SCAMP4-208ENST00000489554 SH3D19Q5HYK7 790 aa12.69□□□□□ -0.38
SCAMP4-208ENST00000489554 ZSCAN25Q6NSZ9 544 aa12.69□□□□□ -0.38
SCAMP4-208ENST00000489554 WDR18Q9BV38 432 aa12.69□□□□□ -0.38
SCAMP4-208ENST00000489554 PNMA3Q9UL41 463 aa12.69□□□□□ -0.38
SCAMP4-208ENST00000489554 SIPA1L1O43166 1804 aa12.69□□□□□ -0.38
SCAMP4-208ENST00000489554 MYH7P12883 1935 aa12.68□□□□□ -0.38
SCAMP4-208ENST00000489554 CDK5RAP2Q96SN8 1893 aa12.68□□□□□ -0.38
SCAMP4-208ENST00000489554 BCRP11274 1271 aa12.68□□□□□ -0.38
SCAMP4-208ENST00000489554 HOXD10P28358 340 aa12.68□□□□□ -0.38
SCAMP4-208ENST00000489554 HMGCS2P54868 508 aa12.68□□□□□ -0.38
SCAMP4-208ENST00000489554 UBE3CQ15386 1083 aa12.68□□□□□ -0.38
SCAMP4-208ENST00000489554 SLC4A8Q2Y0W8 1093 aa12.68□□□□□ -0.38
SCAMP4-208ENST00000489554 TATDN1Q6P1N9 297 aa12.68□□□□□ -0.38
SCAMP4-208ENST00000489554 SMCR8Q8TEV9 937 aaPredicted RBP12.68□□□□□ -0.38
SCAMP4-208ENST00000489554 ARMC5Q96C12 935 aa12.68□□□□□ -0.38
SCAMP4-208ENST00000489554 ARHGAP39Q9C0H5 1083 aa12.68□□□□□ -0.38
SCAMP4-208ENST00000489554 TAOK2Q9UL54 1235 aa12.68□□□□□ -0.38
SCAMP4-208ENST00000489554 ZBTB21Q9ULJ3 1066 aa12.68□□□□□ -0.38
SCAMP4-208ENST00000489554 PHIPQ8WWQ0 1821 aa12.67□□□□□ -0.38
SCAMP4-208ENST00000489554 C19orf81C9J6K1 198 aa12.67□□□□□ -0.38
SCAMP4-208ENST00000489554 GDF11O95390 407 aa12.67□□□□□ -0.38
SCAMP4-208ENST00000489554 CHGBP05060 677 aa12.67□□□□□ -0.38
SCAMP4-208ENST00000489554 POLR3DP05423 398 aaPredicted RBP12.67□□□□□ -0.38
SCAMP4-208ENST00000489554 PSMC4P43686 418 aa12.67□□□□□ -0.38
SCAMP4-208ENST00000489554 BACE1P56817 501 aa12.67□□□□□ -0.38
SCAMP4-208ENST00000489554 C8orf34Q49A92 452 aa12.67□□□□□ -0.38
SCAMP4-208ENST00000489554 TREML2Q5T2D2 321 aa12.67□□□□□ -0.38
SCAMP4-208ENST00000489554 NBPF11Q86T75 865 aa12.67□□□□□ -0.38
SCAMP4-208ENST00000489554 LCORLQ8N3X6 602 aa12.67□□□□□ -0.38
SCAMP4-208ENST00000489554 TSHZ2Q9NRE2 1034 aa12.67□□□□□ -0.38
SCAMP4-208ENST00000489554 MCM9Q9NXL9 1143 aa12.67□□□□□ -0.38
SCAMP4-208ENST00000489554 TMOD4Q9NZQ9 345 aa12.67□□□□□ -0.38
SCAMP4-208ENST00000489554 PTCH2Q9Y6C5 1203 aa12.67□□□□□ -0.38
SCAMP4-208ENST00000489554 USP17L10C9JJH3 530 aa12.66□□□□□ -0.38
SCAMP4-208ENST00000489554 MBD4O95243 580 aa12.66□□□□□ -0.38
SCAMP4-208ENST00000489554 FMNL1O95466 1100 aaPredicted RBP12.66□□□□□ -0.38
SCAMP4-208ENST00000489554 OSBPP22059 807 aa12.66□□□□□ -0.38
SCAMP4-208ENST00000489554 PLCD1P51178 756 aa12.66□□□□□ -0.38
SCAMP4-208ENST00000489554 FCGRTP55899 365 aa12.66□□□□□ -0.38
SCAMP4-208ENST00000489554 JAG1P78504 1218 aa12.66□□□□□ -0.38
SCAMP4-208ENST00000489554 MTMR2Q13614 643 aa12.66□□□□□ -0.38
SCAMP4-208ENST00000489554 CERKLQ49MI3 558 aaPredicted RBP12.66□□□□□ -0.38
SCAMP4-208ENST00000489554 SLC9C1Q4G0N8 1177 aa12.66□□□□□ -0.38
SCAMP4-208ENST00000489554 SDR42E1Q8WUS8 393 aa12.66□□□□□ -0.38
SCAMP4-208ENST00000489554 EVI5LQ96CN4 794 aa12.66□□□□□ -0.38
SCAMP4-208ENST00000489554 TRIM47Q96LD4 638 aa12.66□□□□□ -0.38
SCAMP4-208ENST00000489554 ARMT1Q9H993 441 aa12.66□□□□□ -0.38
SCAMP4-208ENST00000489554 DCP1AQ9NPI6 582 aaPredicted RBP12.66□□□□□ -0.38
SCAMP4-208ENST00000489554 ATP8A2Q9NTI2 1148 aa12.66□□□□□ -0.38
SCAMP4-208ENST00000489554 PTPRFP10586 1907 aa12.66□□□□□ -0.38
SCAMP4-208ENST00000489554 ATAD5Q96QE3 1844 aa12.65□□□□□ -0.38
SCAMP4-208ENST00000489554 GH2P01242 217 aa12.65□□□□□ -0.38
SCAMP4-208ENST00000489554 GCLCP48506 637 aaPredicted RBP12.65□□□□□ -0.38
SCAMP4-208ENST00000489554 GABPAQ06546 454 aa12.65□□□□□ -0.38
SCAMP4-208ENST00000489554 AMOTL1Q8IY63 956 aa12.65□□□□□ -0.38
SCAMP4-208ENST00000489554 KBTBD3Q8NAB2 608 aa12.65□□□□□ -0.38
SCAMP4-208ENST00000489554 DDRGK1Q96HY6 314 aa12.65□□□□□ -0.38
SCAMP4-208ENST00000489554 IL25Q9H293 177 aa12.65□□□□□ -0.38
SCAMP4-208ENST00000489554 CABP5Q9NP86 173 aa12.65□□□□□ -0.38
SCAMP4-208ENST00000489554 SRRDQ9UH36 339 aa12.65□□□□□ -0.38
SCAMP4-208ENST00000489554 DDX60LQ5H9U9 1706 aaKnown RBP12.65□□□□□ -0.38
SCAMP4-208ENST00000489554 MYH1P12882 1939 aa12.64□□□□□ -0.39
SCAMP4-208ENST00000489554 LOC285556D6RIA3 1793 aa12.64□□□□□ -0.39
SCAMP4-208ENST00000489554 TRIM6-TRIM34B2RNG4 842 aa12.64□□□□□ -0.39
SCAMP4-208ENST00000489554 ZFYP08048 801 aaPredicted RBP12.64□□□□□ -0.39
SCAMP4-208ENST00000489554 CHMLP26374 656 aa12.64□□□□□ -0.39
SCAMP4-208ENST00000489554 CTGFP29279 349 aa12.64□□□□□ -0.39
SCAMP4-208ENST00000489554 HOXA7P31268 230 aaPredicted RBP12.64□□□□□ -0.39
SCAMP4-208ENST00000489554 SHMT1P34896 483 aa12.64□□□□□ -0.39
SCAMP4-208ENST00000489554 FAM110CQ1W6H9 321 aa12.64□□□□□ -0.39
SCAMP4-208ENST00000489554 ABCB5Q2M3G0 1257 aa12.64□□□□□ -0.39
SCAMP4-208ENST00000489554 SHROOM1Q2M3G4 852 aaPredicted RBP12.64□□□□□ -0.39
SCAMP4-208ENST00000489554 LRRFIP1Q32MZ4 808 aaKnown RBP12.64□□□□□ -0.39
SCAMP4-208ENST00000489554 SLFNL1Q499Z3 407 aa12.64□□□□□ -0.39
SCAMP4-208ENST00000489554 RILPL2Q969X0 211 aa12.64□□□□□ -0.39
SCAMP4-208ENST00000489554 ZNF333Q96JL9 665 aa12.64□□□□□ -0.39
SCAMP4-208ENST00000489554 ASCC2Q9H1I8 757 aaPredicted RBP12.64□□□□□ -0.39
SCAMP4-208ENST00000489554 SWAP70Q9UH65 585 aa12.64□□□□□ -0.39
SCAMP4-208ENST00000489554 MYPNQ86TC9 1320 aa12.63□□□□□ -0.39
SCAMP4-208ENST00000489554 PRKAB2O43741 272 aa12.63□□□□□ -0.39
SCAMP4-208ENST00000489554 ECM2O94769 699 aaPredicted RBP12.63□□□□□ -0.39
SCAMP4-208ENST00000489554 USP14P54578 494 aa12.63□□□□□ -0.39
SCAMP4-208ENST00000489554 IRX3P78415 501 aaPredicted RBP12.63□□□□□ -0.39
SCAMP4-208ENST00000489554 RAB3GAP1Q15042 981 aa12.63□□□□□ -0.39
SCAMP4-208ENST00000489554 USP17L2Q6R6M4 530 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms