RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 GPAT2Q6NUI2 795 aa12.84□□□□□ -0.35
DDX56-212ENST00000485367 PRRT2Q7Z6L0 340 aaPredicted RBP12.84□□□□□ -0.35
DDX56-212ENST00000485367 CRACR2BQ8N4Y2 399 aaPredicted RBP12.84□□□□□ -0.35
DDX56-212ENST00000485367 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.84□□□□□ -0.35
DDX56-212ENST00000485367 PTPRFP10586 1907 aa12.83□□□□□ -0.36
DDX56-212ENST00000485367 MYH1P12882 1939 aa12.83□□□□□ -0.36
DDX56-212ENST00000485367 SMARCA5O60264 1052 aaPredicted RBP12.83□□□□□ -0.36
DDX56-212ENST00000485367 DDIT3P35638 169 aa12.83□□□□□ -0.36
DDX56-212ENST00000485367 CAP2P40123 477 aa12.83□□□□□ -0.36
DDX56-212ENST00000485367 HDAC1Q13547 482 aaPredicted RBP12.83□□□□□ -0.36
DDX56-212ENST00000485367 KIF22Q14807 665 aa12.83□□□□□ -0.36
DDX56-212ENST00000485367 SLC9C2Q5TAH2 1124 aa12.83□□□□□ -0.36
DDX56-212ENST00000485367 FOXP4Q8IVH2 680 aaPredicted RBP12.83□□□□□ -0.36
DDX56-212ENST00000485367 PARK7Q99497 189 aaKnown RBP12.83□□□□□ -0.36
DDX56-212ENST00000485367 LRRCC1Q9C099 1032 aa12.83□□□□□ -0.36
DDX56-212ENST00000485367 ARHGAP39Q9C0H5 1083 aa12.83□□□□□ -0.36
DDX56-212ENST00000485367 SIPA1L1O43166 1804 aa12.83□□□□□ -0.36
DDX56-212ENST00000485367 MAGEB6P1A0A0J9YX57 407 aa12.82□□□□□ -0.36
DDX56-212ENST00000485367 HLA-DOAP06340 250 aa12.82□□□□□ -0.36
DDX56-212ENST00000485367 CYP2C8P10632 490 aa12.82□□□□□ -0.36
DDX56-212ENST00000485367 PDE6AP16499 860 aa12.82□□□□□ -0.36
DDX56-212ENST00000485367 LACTBP83111 547 aaPredicted RBP12.82□□□□□ -0.36
DDX56-212ENST00000485367 TMED8Q6PL24 325 aaPredicted RBP12.82□□□□□ -0.36
DDX56-212ENST00000485367 C17orf99Q6UX52 265 aa12.82□□□□□ -0.36
DDX56-212ENST00000485367 CERS3Q8IU89 383 aa12.82□□□□□ -0.36
DDX56-212ENST00000485367 EDC3Q96F86 508 aaKnown RBP12.82□□□□□ -0.36
DDX56-212ENST00000485367 GBP4Q96PP9 640 aa12.82□□□□□ -0.36
DDX56-212ENST00000485367 PANK2Q9BZ23 570 aa12.82□□□□□ -0.36
DDX56-212ENST00000485367 BOLA2Q9H3K6 86 aa12.82□□□□□ -0.36
DDX56-212ENST00000485367 ZSWIM8A7E2V4 1837 aa12.82□□□□□ -0.36
DDX56-212ENST00000485367 SPP2Q13103 211 aa12.81□□□□□ -0.36
DDX56-212ENST00000485367 ZNF280CQ8ND82 737 aa12.81□□□□□ -0.36
DDX56-212ENST00000485367 TRIM44Q96DX7 344 aaPredicted RBP12.81□□□□□ -0.36
DDX56-212ENST00000485367 ADGRA2Q96PE1 1338 aa12.81□□□□□ -0.36
DDX56-212ENST00000485367 ZNF532Q9HCE3 1301 aa12.81□□□□□ -0.36
DDX56-212ENST00000485367 USP17L5A8MUK1 530 aa12.81□□□□□ -0.36
DDX56-212ENST00000485367 ATP5JP18859 108 aa12.81□□□□□ -0.36
DDX56-212ENST00000485367 RBM25P49756 843 aaKnown RBP12.81□□□□□ -0.36
DDX56-212ENST00000485367 RBM10P98175 930 aaKnown RBP12.81□□□□□ -0.36
DDX56-212ENST00000485367 SMC5Q8IY18 1101 aa12.81□□□□□ -0.36
DDX56-212ENST00000485367 RIOK1Q9BRS2 568 aaKnown RBP12.81□□□□□ -0.36
DDX56-212ENST00000485367 PAG1Q9NWQ8 432 aa12.81□□□□□ -0.36
DDX56-212ENST00000485367 METTL16Q86W50 562 aaKnown RBP12.8□□□□□ -0.36
DDX56-212ENST00000485367 HAUS7Q99871 368 aa12.8□□□□□ -0.36
DDX56-212ENST00000485367 DCTPP1Q9H773 170 aa12.8□□□□□ -0.36
DDX56-212ENST00000485367 DNAJC18Q9H819 358 aa12.8□□□□□ -0.36
DDX56-212ENST00000485367 AS3MTQ9HBK9 375 aa12.8□□□□□ -0.36
DDX56-212ENST00000485367 SLC45A1Q9Y2W3 748 aa12.8□□□□□ -0.36
DDX56-212ENST00000485367 PTCH2Q9Y6C5 1203 aa12.8□□□□□ -0.36
DDX56-212ENST00000485367 GDF11O95390 407 aa12.79□□□□□ -0.36
DDX56-212ENST00000485367 FMNL1O95466 1100 aaPredicted RBP12.79□□□□□ -0.36
DDX56-212ENST00000485367 ASNSP08243 561 aa12.79□□□□□ -0.36
DDX56-212ENST00000485367 PSMC4P43686 418 aa12.79□□□□□ -0.36
DDX56-212ENST00000485367 TERF1P54274 439 aa12.79□□□□□ -0.36
DDX56-212ENST00000485367 HMGCS2P54868 508 aa12.79□□□□□ -0.36
DDX56-212ENST00000485367 JAG1P78504 1218 aa12.79□□□□□ -0.36
DDX56-212ENST00000485367 TREML2Q5T2D2 321 aa12.79□□□□□ -0.36
DDX56-212ENST00000485367 CRNKL1Q9BZJ0 848 aaKnown RBP12.79□□□□□ -0.36
DDX56-212ENST00000485367 AGTPBP1Q9UPW5 1226 aa12.79□□□□□ -0.36
DDX56-212ENST00000485367 TCRBV5S4A2TA0A5A2 114 aa12.79□□□□□ -0.36
DDX56-212ENST00000485367 SHROOM1Q2M3G4 852 aaPredicted RBP12.79□□□□□ -0.36
DDX56-212ENST00000485367 TTC6Q86TZ1 520 aa12.79□□□□□ -0.36
DDX56-212ENST00000485367 SMCR8Q8TEV9 937 aaPredicted RBP12.79□□□□□ -0.36
DDX56-212ENST00000485367 TRIM47Q96LD4 638 aa12.79□□□□□ -0.36
DDX56-212ENST00000485367 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.79□□□□□ -0.362e-6■■■□□ 16
DDX56-212ENST00000485367 GZF1Q9H116 711 aaPredicted RBP12.79□□□□□ -0.36
DDX56-212ENST00000485367 GNRH1P01148 92 aa12.78□□□□□ -0.36
DDX56-212ENST00000485367 POLR3DP05423 398 aaPredicted RBP12.78□□□□□ -0.36
DDX56-212ENST00000485367 BCRP11274 1271 aa12.78□□□□□ -0.36
DDX56-212ENST00000485367 CTGFP29279 349 aa12.78□□□□□ -0.36
DDX56-212ENST00000485367 SLFNL1Q499Z3 407 aa12.78□□□□□ -0.36
DDX56-212ENST00000485367 SLC9C1Q4G0N8 1177 aa12.78□□□□□ -0.36
DDX56-212ENST00000485367 PROCA1Q8NCQ7 364 aaPredicted RBP12.78□□□□□ -0.36
DDX56-212ENST00000485367 ARMC5Q96C12 935 aa12.78□□□□□ -0.36
DDX56-212ENST00000485367 WDR18Q9BV38 432 aa12.78□□□□□ -0.36
DDX56-212ENST00000485367 ECHDC1Q9NTX5 307 aa12.78□□□□□ -0.36
DDX56-212ENST00000485367 SERPINB13Q9UIV8 391 aa12.78□□□□□ -0.36
DDX56-212ENST00000485367 ZBTB21Q9ULJ3 1066 aa12.78□□□□□ -0.36
DDX56-212ENST00000485367 HTTP42858 3142 aa12.77□□□□□ -0.36
DDX56-212ENST00000485367 NAV1Q8NEY1 1877 aa12.77□□□□□ -0.36
DDX56-212ENST00000485367 KIAA0100Q14667 2235 aaKnown RBP12.77□□□□□ -0.36
DDX56-212ENST00000485367 CCDC173Q0VFZ6 552 aa12.77□□□□□ -0.36
DDX56-212ENST00000485367 MTMR2Q13614 643 aa12.77□□□□□ -0.36
DDX56-212ENST00000485367 LCORLQ8N3X6 602 aa12.77□□□□□ -0.36
DDX56-212ENST00000485367 ARMT1Q9H993 441 aa12.77□□□□□ -0.36
DDX56-212ENST00000485367 GINM1Q9NU53 330 aa12.77□□□□□ -0.36
DDX56-212ENST00000485367 PNMA3Q9UL41 463 aa12.77□□□□□ -0.36
DDX56-212ENST00000485367 LOC285556D6RIA3 1793 aa12.77□□□□□ -0.37
DDX56-212ENST00000485367 MYH7P12883 1935 aa12.77□□□□□ -0.37
DDX56-212ENST00000485367 MBD4O95243 580 aa12.76□□□□□ -0.37
DDX56-212ENST00000485367 GH2P01242 217 aa12.76□□□□□ -0.37
DDX56-212ENST00000485367 OSBPP22059 807 aa12.76□□□□□ -0.37
DDX56-212ENST00000485367 HOXD10P28358 340 aa12.76□□□□□ -0.37
DDX56-212ENST00000485367 ADD2P35612 726 aa12.76□□□□□ -0.37
DDX56-212ENST00000485367 PLCD1P51178 756 aa12.76□□□□□ -0.37
DDX56-212ENST00000485367 MFAP1P55081 439 aaKnown RBP12.76□□□□□ -0.37
DDX56-212ENST00000485367 PRMT2P55345 433 aa12.76□□□□□ -0.37
DDX56-212ENST00000485367 FCGRTP55899 365 aa12.76□□□□□ -0.37
DDX56-212ENST00000485367 PABPC4Q13310 644 aaKnown RBP eCLIP12.76□□□□□ -0.372e-6■■□□□ 12.6
DDX56-212ENST00000485367 RAB3GAP1Q15042 981 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms