RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 RNASE1P07998 156 aaKnown RBP3.79□□□□□ -1.8
ITGB1-213ENST00000484088 RANGAP1P46060 587 aaPredicted RBP3.79□□□□□ -1.8
ITGB1-213ENST00000484088 IRAK1P51617 712 aa3.79□□□□□ -1.8
ITGB1-213ENST00000484088 LMNB2Q03252 620 aa3.79□□□□□ -1.8
ITGB1-213ENST00000484088 PAK2Q13177 524 aa3.79□□□□□ -1.8
ITGB1-213ENST00000484088 SEPT6Q14141 434 aa3.79□□□□□ -1.8
ITGB1-213ENST00000484088 NAALADL2Q58DX5 795 aa3.79□□□□□ -1.8
ITGB1-213ENST00000484088 HP1BP3Q5SSJ5 553 aaPredicted RBP3.79□□□□□ -1.8
ITGB1-213ENST00000484088 LLGL2Q6P1M3 1020 aa3.79□□□□□ -1.8
ITGB1-213ENST00000484088 BNC2Q6ZN30 1099 aaPredicted RBP3.79□□□□□ -1.8
ITGB1-213ENST00000484088 ZNF654Q8IZM8 581 aa3.79□□□□□ -1.8
ITGB1-213ENST00000484088 SLC43A3Q8NBI5 491 aa3.79□□□□□ -1.8
ITGB1-213ENST00000484088 DDX54Q8TDD1 881 aaKnown RBP3.79□□□□□ -1.8
ITGB1-213ENST00000484088 RASGRP4Q8TDF6 673 aa3.79□□□□□ -1.8
ITGB1-213ENST00000484088 ZNF296Q8WUU4 475 aaPredicted RBP3.79□□□□□ -1.8
ITGB1-213ENST00000484088 YIPF2Q9BWQ6 316 aa3.79□□□□□ -1.8
ITGB1-213ENST00000484088 LRRC3Q9BY71 257 aa3.79□□□□□ -1.8
ITGB1-213ENST00000484088 C19orf73Q9NVV2 129 aa3.79□□□□□ -1.8
ITGB1-213ENST00000484088 PCDHA4Q9UN74 947 aa3.79□□□□□ -1.8
ITGB1-213ENST00000484088 MINDY4BA8MYZ0 360 aa3.78□□□□□ -1.8
ITGB1-213ENST00000484088 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.78□□□□□ -1.8
ITGB1-213ENST00000484088 FANCGO15287 622 aa3.78□□□□□ -1.8
ITGB1-213ENST00000484088 RNGTTO60942 597 aaKnown RBP3.78□□□□□ -1.8
ITGB1-213ENST00000484088 CILPO75339 1184 aa3.78□□□□□ -1.8
ITGB1-213ENST00000484088 CEACAM5P06731 702 aa3.78□□□□□ -1.8
ITGB1-213ENST00000484088 FGRP09769 529 aa3.78□□□□□ -1.8
ITGB1-213ENST00000484088 FUT4P22083 530 aa3.78□□□□□ -1.8
ITGB1-213ENST00000484088 EIF4A3P38919 411 aaKnown RBP3.78□□□□□ -1.8
ITGB1-213ENST00000484088 CAP2P40123 477 aa3.78□□□□□ -1.8
ITGB1-213ENST00000484088 FAM160A1Q05DH4 1040 aa3.78□□□□□ -1.8
ITGB1-213ENST00000484088 ZNF792Q3KQV3 632 aa3.78□□□□□ -1.8
ITGB1-213ENST00000484088 DUSP27Q5VZP5 1158 aa3.78□□□□□ -1.8
ITGB1-213ENST00000484088 FAM196AQ6ZSG2 479 aa3.78□□□□□ -1.8
ITGB1-213ENST00000484088 CCDC84Q86UT8 332 aaPredicted RBP3.78□□□□□ -1.8
ITGB1-213ENST00000484088 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.78□□□□□ -1.8
ITGB1-213ENST00000484088 FBXO27Q8NI29 283 aa3.78□□□□□ -1.8
ITGB1-213ENST00000484088 PPP1R13LQ8WUF5 828 aa3.78□□□□□ -1.8
ITGB1-213ENST00000484088 NT5C1AQ9BXI3 368 aa3.78□□□□□ -1.8
ITGB1-213ENST00000484088 EMILIN2Q9BXX0 1053 aa3.78□□□□□ -1.8
ITGB1-213ENST00000484088 BCL11AQ9H165 835 aa3.78□□□□□ -1.8
ITGB1-213ENST00000484088 MKNK2Q9HBH9 465 aa3.78□□□□□ -1.8
ITGB1-213ENST00000484088 GOLGA2P5Q9HBQ8 144 aa3.78□□□□□ -1.8
ITGB1-213ENST00000484088 CBX8Q9HC52 389 aa3.78□□□□□ -1.8
ITGB1-213ENST00000484088 PRDM7Q9NQW5 492 aa3.78□□□□□ -1.8
ITGB1-213ENST00000484088 SEMA3GQ9NS98 782 aa3.78□□□□□ -1.8
ITGB1-213ENST00000484088 CYP8B1Q9UNU6 501 aa3.78□□□□□ -1.8
ITGB1-213ENST00000484088 ARID1BQ8NFD5 2236 aaPredicted RBP3.78□□□□□ -1.8
ITGB1-213ENST00000484088 WASH4PA8MWX3 477 aa3.77□□□□□ -1.81
ITGB1-213ENST00000484088 DNAJA2O60884 412 aa3.77□□□□□ -1.81
ITGB1-213ENST00000484088 RLBP1P12271 317 aa3.77□□□□□ -1.81
ITGB1-213ENST00000484088 GBP2P32456 591 aaPredicted RBP3.77□□□□□ -1.81
ITGB1-213ENST00000484088 CYP27A1Q02318 531 aa3.77□□□□□ -1.81
ITGB1-213ENST00000484088 PRKCQQ04759 706 aa3.77□□□□□ -1.81
ITGB1-213ENST00000484088 SCARA3Q6AZY7 606 aa3.77□□□□□ -1.81
ITGB1-213ENST00000484088 ARMCX6Q7L4S7 300 aa3.77□□□□□ -1.81
ITGB1-213ENST00000484088 GOLM1Q8NBJ4 401 aa3.77□□□□□ -1.81
ITGB1-213ENST00000484088 FLCNQ8NFG4 579 aa3.77□□□□□ -1.81
ITGB1-213ENST00000484088 NETO1Q8TDF5 533 aa3.77□□□□□ -1.81
ITGB1-213ENST00000484088 WNT10AQ9GZT5 417 aa3.77□□□□□ -1.81
ITGB1-213ENST00000484088 PIDD1Q9HB75 910 aa3.77□□□□□ -1.81
ITGB1-213ENST00000484088 PRDM10Q9NQV6 1147 aa3.77□□□□□ -1.81
ITGB1-213ENST00000484088 UBP1Q9NZI7 540 aa3.77□□□□□ -1.81
ITGB1-213ENST00000484088 TJP2Q9UDY2 1190 aa3.77□□□□□ -1.81
ITGB1-213ENST00000484088 POLR3KQ9Y2Y1 108 aaPredicted RBP3.77□□□□□ -1.81
ITGB1-213ENST00000484088 ST14Q9Y5Y6 855 aa3.77□□□□□ -1.81
ITGB1-213ENST00000484088 PITPNM2Q9BZ72 1349 aa3.76□□□□□ -1.81
ITGB1-213ENST00000484088 IGF2BP3O00425 579 aaKnown RBP eCLIP3.76□□□□□ -1.81
ITGB1-213ENST00000484088 ATF4P18848 351 aaPredicted RBP3.76□□□□□ -1.81
ITGB1-213ENST00000484088 SOX9P48436 509 aa3.76□□□□□ -1.81
ITGB1-213ENST00000484088 PWP1Q13610 501 aa3.76□□□□□ -1.81
ITGB1-213ENST00000484088 WIPI1Q5MNZ9 446 aaPredicted RBP3.76□□□□□ -1.81
ITGB1-213ENST00000484088 OGFOD2Q6N063 350 aa3.76□□□□□ -1.81
ITGB1-213ENST00000484088 MCF2L2Q86YR7 1114 aa3.76□□□□□ -1.81
ITGB1-213ENST00000484088 CILP2Q8IUL8 1156 aa3.76□□□□□ -1.81
ITGB1-213ENST00000484088 RELL1Q8IUW5 271 aa3.76□□□□□ -1.81
ITGB1-213ENST00000484088 KIAA0825Q8IV33 1275 aa3.76□□□□□ -1.81
ITGB1-213ENST00000484088 SLITRK4Q8IW52 837 aa3.76□□□□□ -1.81
ITGB1-213ENST00000484088 LRRN4CLQ8ND94 238 aa3.76□□□□□ -1.81
ITGB1-213ENST00000484088 DNAJB8Q8NHS0 232 aa3.76□□□□□ -1.81
ITGB1-213ENST00000484088 GATAD2BQ8WXI9 593 aa3.76□□□□□ -1.81
ITGB1-213ENST00000484088 GPRASP2Q96D09 838 aa3.76□□□□□ -1.81
ITGB1-213ENST00000484088 FBXL18Q96ME1 805 aa3.76□□□□□ -1.81
ITGB1-213ENST00000484088 SPON2Q9BUD6 331 aa3.76□□□□□ -1.81
ITGB1-213ENST00000484088 CCSER2Q9H7U1 834 aa3.76□□□□□ -1.81
ITGB1-213ENST00000484088 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.76□□□□□ -1.811e-6■■□□□ 13.9
ITGB1-213ENST00000484088 VAV3Q9UKW4 847 aa3.76□□□□□ -1.81
ITGB1-213ENST00000484088 CORINQ9Y5Q5 1042 aa3.76□□□□□ -1.81
ITGB1-213ENST00000484088 PRR36Q9H6K5 1346 aa3.75□□□□□ -1.81
ITGB1-213ENST00000484088 ZNF865P0CJ78 1059 aaPredicted RBP3.75□□□□□ -1.81
ITGB1-213ENST00000484088 GRK4P32298 578 aa3.75□□□□□ -1.81
ITGB1-213ENST00000484088 IFI16Q16666 785 aaKnown RBP3.75□□□□□ -1.81
ITGB1-213ENST00000484088 LCE4AQ5TA78 99 aa3.75□□□□□ -1.81
ITGB1-213ENST00000484088 TP53INP2Q8IXH6 220 aa3.75□□□□□ -1.81
ITGB1-213ENST00000484088 GIMAP7Q8NHV1 300 aa3.75□□□□□ -1.81
ITGB1-213ENST00000484088 ACSF2Q96CM8 615 aaPredicted RBP3.75□□□□□ -1.81
ITGB1-213ENST00000484088 Q96M66 194 aa3.75□□□□□ -1.81
ITGB1-213ENST00000484088 SP110Q9HB58 689 aa3.75□□□□□ -1.81
ITGB1-213ENST00000484088 CAPN10Q9HC96 672 aa3.75□□□□□ -1.81
ITGB1-213ENST00000484088 GINM1Q9NU53 330 aa3.75□□□□□ -1.81
ITGB1-213ENST00000484088 SLC5A6Q9Y289 635 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms