RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 CCL14Q16627 93 aa21.43■■□□□ 1.02
RXRB-203ENST00000481441 Q3C1V9 767 aa21.43■■□□□ 1.02
RXRB-203ENST00000481441 UNC80Q8N2C7 3258 aa21.43■■□□□ 1.02
RXRB-203ENST00000481441 MAST2Q6P0Q8 1798 aa21.42■■□□□ 1.02
RXRB-203ENST00000481441 C19orf81C9J6K1 198 aa21.42■■□□□ 1.02
RXRB-203ENST00000481441 ASNSP08243 561 aa21.42■■□□□ 1.02
RXRB-203ENST00000481441 PDE3AQ14432 1141 aa21.42■■□□□ 1.02
RXRB-203ENST00000481441 MORN1Q5T089 497 aa21.42■■□□□ 1.02
RXRB-203ENST00000481441 FAM109BQ6ICB4 259 aaPredicted RBP21.42■■□□□ 1.02
RXRB-203ENST00000481441 POTEEQ6S8J3 1075 aa21.42■■□□□ 1.02
RXRB-203ENST00000481441 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.42■■□□□ 1.02
RXRB-203ENST00000481441 SH3RF3Q8TEJ3 882 aaPredicted RBP21.42■■□□□ 1.02
RXRB-203ENST00000481441 GUCD1Q96NT3 240 aa21.42■■□□□ 1.02
RXRB-203ENST00000481441 MEIS3Q99687 375 aa21.42■■□□□ 1.02
RXRB-203ENST00000481441 PORCNQ9H237 461 aa21.42■■□□□ 1.02
RXRB-203ENST00000481441 RAI14Q9P0K7 980 aa21.42■■□□□ 1.02
RXRB-203ENST00000481441 FOCADQ5VW36 1801 aa21.41■■□□□ 1.02
RXRB-203ENST00000481441 RGS2P41220 211 aa21.41■■□□□ 1.02
RXRB-203ENST00000481441 ERVK-9P63128 1117 aa21.41■■□□□ 1.02
RXRB-203ENST00000481441 ERVK-24P63145 666 aa21.41■■□□□ 1.02
RXRB-203ENST00000481441 GPR142Q7Z601 462 aa21.41■■□□□ 1.02
RXRB-203ENST00000481441 NEUROD6Q96NK8 337 aa21.41■■□□□ 1.02
RXRB-203ENST00000481441 DHX36Q9H2U1 1008 aaKnown RBP21.41■■□□□ 1.02
RXRB-203ENST00000481441 DNAJC18Q9H819 358 aa21.41■■□□□ 1.02
RXRB-203ENST00000481441 USP17L10C9JJH3 530 aa21.4■■□□□ 1.02
RXRB-203ENST00000481441 ARID4AP29374 1257 aaPredicted RBP21.4■■□□□ 1.02
RXRB-203ENST00000481441 SHROOM1Q2M3G4 852 aaPredicted RBP21.4■■□□□ 1.02
RXRB-203ENST00000481441 METTL16Q86W50 562 aaKnown RBP21.4■■□□□ 1.02
RXRB-203ENST00000481441 APBA2Q99767 749 aa21.4■■□□□ 1.02
RXRB-203ENST00000481441 NOB1Q9ULX3 412 aaKnown RBP21.4■■□□□ 1.02
RXRB-203ENST00000481441 SRGAP3O43295 1099 aa21.39■■□□□ 1.01
RXRB-203ENST00000481441 PLEKHH3Q7Z736 793 aa21.39■■□□□ 1.01
RXRB-203ENST00000481441 MCAMP43121 646 aa21.38■■□□□ 1.01
RXRB-203ENST00000481441 MTX1Q13505 466 aa21.38■■□□□ 1.01
RXRB-203ENST00000481441 GTF3C2Q8WUA4 911 aaPredicted RBP21.38■■□□□ 1.01
RXRB-203ENST00000481441 API5Q9BZZ5 524 aaKnown RBP21.38■■□□□ 1.01
RXRB-203ENST00000481441 GINM1Q9NU53 330 aa21.38■■□□□ 1.01
RXRB-203ENST00000481441 GORABQ5T7V8 394 aa21.37■■□□□ 1.01
RXRB-203ENST00000481441 FOXP4Q8IVH2 680 aaPredicted RBP21.37■■□□□ 1.01
RXRB-203ENST00000481441 CCAR1Q8IX12 1150 aaKnown RBP21.37■■□□□ 1.01
RXRB-203ENST00000481441 PAGR1Q9BTK6 254 aa21.37■■□□□ 1.01
RXRB-203ENST00000481441 EMILIN3Q9NT22 766 aa21.37■■□□□ 1.01
RXRB-203ENST00000481441 LRP2BPQ9P2M1 347 aa21.37■■□□□ 1.01
RXRB-203ENST00000481441 ZBTB21Q9ULJ3 1066 aa21.37■■□□□ 1.01
RXRB-203ENST00000481441 GDF11O95390 407 aa21.36■■□□□ 1.01
RXRB-203ENST00000481441 MAP2K5Q13163 448 aa21.36■■□□□ 1.01
RXRB-203ENST00000481441 MAPKAPK5Q8IW41 473 aa21.36■■□□□ 1.01
RXRB-203ENST00000481441 CDCA7LQ96GN5 454 aa21.36■■□□□ 1.01
RXRB-203ENST00000481441 NOL10Q9BSC4 688 aaKnown RBP21.36■■□□□ 1.01
RXRB-203ENST00000481441 AATFQ9NY61 560 aaKnown RBP eCLIP21.36■■□□□ 1.01
RXRB-203ENST00000481441 FLT1P17948 1338 aa21.36■■□□□ 1.01
RXRB-203ENST00000481441 LTBP2Q14767 1821 aa21.36■■□□□ 1.01
RXRB-203ENST00000481441 PPP4CP60510 307 aa21.35■■□□□ 1.01
RXRB-203ENST00000481441 TGFBRAP1Q8WUH2 860 aa21.35■■□□□ 1.01
RXRB-203ENST00000481441 FAM161BQ96MY7 647 aa21.35■■□□□ 1.01
RXRB-203ENST00000481441 SENP6Q9GZR1 1112 aaPredicted RBP21.35■■□□□ 1.01
RXRB-203ENST00000481441 MYO5AQ9Y4I1 1855 aaKnown RBP21.34■■□□□ 1.01
RXRB-203ENST00000481441 BAG3O95817 575 aa21.34■■□□□ 1.01
RXRB-203ENST00000481441 UQCRFS1P1P0C7P4 283 aa21.34■■□□□ 1.01
RXRB-203ENST00000481441 PLCG2P16885 1265 aa21.34■■□□□ 1.01
RXRB-203ENST00000481441 CRACR2BQ8N4Y2 399 aaPredicted RBP21.34■■□□□ 1.01
RXRB-203ENST00000481441 EDC3Q96F86 508 aaKnown RBP21.34■■□□□ 1.01
RXRB-203ENST00000481441 LBHD1Q9BQE6 289 aaPredicted RBP21.34■■□□□ 1.01
RXRB-203ENST00000481441 FLRT1Q9NZU1 646 aa21.34■■□□□ 1.01
RXRB-203ENST00000481441 PALD1Q9ULE6 856 aa21.34■■□□□ 1.01
RXRB-203ENST00000481441 RABGAP1Q9Y3P9 1069 aa21.34■■□□□ 1.01
RXRB-203ENST00000481441 CNMDO75829 334 aa21.33■■□□□ 1.01
RXRB-203ENST00000481441 GNAI3P08754 354 aa21.33■■□□□ 1.01
RXRB-203ENST00000481441 NAA16Q6N069 864 aaPredicted RBP21.33■■□□□ 1.01
RXRB-203ENST00000481441 USP17L2Q6R6M4 530 aa21.33■■□□□ 1.01
RXRB-203ENST00000481441 ADGRA1Q86SQ6 560 aa21.33■■□□□ 1.01
RXRB-203ENST00000481441 TRMT2AQ8IZ69 625 aaKnown RBP21.33■■□□□ 1.01
RXRB-203ENST00000481441 TRIM34Q9BYJ4 488 aa21.33■■□□□ 1.01
RXRB-203ENST00000481441 RLFQ13129 1914 aa21.33■■□□□ 1
RXRB-203ENST00000481441 MFSD14CQ5VZR4 134 aa21.32■■□□□ 1
RXRB-203ENST00000481441 C12orf42Q96LP6 360 aa21.32■■□□□ 1
RXRB-203ENST00000481441 DDX20Q9UHI6 824 aaKnown RBP21.32■■□□□ 1
RXRB-203ENST00000481441 GLRX3O76003 335 aaKnown RBP21.31■■□□□ 1
RXRB-203ENST00000481441 CT47B1P0C2W7 299 aaPredicted RBP21.31■■□□□ 1
RXRB-203ENST00000481441 ATN1P54259 1190 aaPredicted RBP21.31■■□□□ 1
RXRB-203ENST00000481441 LPAR1Q92633 364 aa21.31■■□□□ 1
RXRB-203ENST00000481441 CWC22Q9HCG8 908 aaKnown RBP21.31■■□□□ 1
RXRB-203ENST00000481441 SNRKQ9NRH2 765 aa21.31■■□□□ 1
RXRB-203ENST00000481441 NDUFB9Q9Y6M9 179 aa21.31■■□□□ 1
RXRB-203ENST00000481441 MYH1P12882 1939 aa21.31■■□□□ 1
RXRB-203ENST00000481441 SLC15A5A6NIM6 579 aa21.3■■□□□ 1
RXRB-203ENST00000481441 MSCO60682 206 aa21.3■■□□□ 1
RXRB-203ENST00000481441 HOXC6P09630 235 aa21.3■■□□□ 1
RXRB-203ENST00000481441 PTPREP23469 700 aa21.3■■□□□ 1
RXRB-203ENST00000481441 CCNA1P78396 465 aa21.3■■□□□ 1
RXRB-203ENST00000481441 ZNF697Q5TEC3 545 aa21.3■■□□□ 1
RXRB-203ENST00000481441 USP17L15C9J2P7 530 aa21.29■■□□□ 1
RXRB-203ENST00000481441 USP17L13C9JLJ4 530 aa21.29■■□□□ 1
RXRB-203ENST00000481441 USP17L11C9JVI0 530 aa21.29■■□□□ 1
RXRB-203ENST00000481441 USP17L18D6R9N7 530 aa21.29■■□□□ 1
RXRB-203ENST00000481441 USP17L22D6RA61 530 aa21.29■■□□□ 1
RXRB-203ENST00000481441 USP17L17D6RBQ6 530 aa21.29■■□□□ 1
RXRB-203ENST00000481441 USP17L19D6RCP7 530 aa21.29■■□□□ 1
RXRB-203ENST00000481441 USP17L20D6RJB6 530 aa21.29■■□□□ 1
RXRB-203ENST00000481441 DNM1LO00429 736 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms