RNA–Protein interactions for RNA: ENST00000479739.6

SH3YL1-222, Transcript of SH3 and SYLF domain containing 1, human

TSL 2

Gene SH3YL1, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SH3YL1-222	ENST00000479739	ME1	P48163	572 aa		10.5	□□□□□ -0.73
SH3YL1-222	ENST00000479739	TERF2	Q15554	542 aa		10.5	□□□□□ -0.73
SH3YL1-222	ENST00000479739	CHADL	Q6NUI6	762 aa		10.5	□□□□□ -0.73
SH3YL1-222	ENST00000479739	FILIP1	Q7Z7B0	1213 aa		10.5	□□□□□ -0.73
SH3YL1-222	ENST00000479739	FSIP1	Q8NA03	581 aa		10.5	□□□□□ -0.73
SH3YL1-222	ENST00000479739	KCNG4	Q8TDN1	519 aa		10.5	□□□□□ -0.73
SH3YL1-222	ENST00000479739	GOLPH3L	Q9H4A5	285 aa		10.5	□□□□□ -0.73
SH3YL1-222	ENST00000479739	TMEM51	Q9NW97	253 aa		10.5	□□□□□ -0.73
SH3YL1-222	ENST00000479739	SLFN14	P0C7P3	912 aa		10.49	□□□□□ -0.73
SH3YL1-222	ENST00000479739	EXOSC10	Q01780	885 aa	Known RBP	10.49	□□□□□ -0.73
SH3YL1-222	ENST00000479739	UBE4A	Q14139	1066 aa		10.49	□□□□□ -0.73
SH3YL1-222	ENST00000479739	BMS1	Q14692	1282 aa	Known RBP	10.49	□□□□□ -0.73
SH3YL1-222	ENST00000479739	KMT5B	Q4FZB7	885 aa		10.49	□□□□□ -0.73
SH3YL1-222	ENST00000479739	USP50	Q70EL3	339 aa	Predicted RBP	10.49	□□□□□ -0.73
SH3YL1-222	ENST00000479739	FMR1NB	Q8N0W7	255 aa	Predicted RBP	10.49	□□□□□ -0.73
SH3YL1-222	ENST00000479739	AOPEP	Q8N6M6	819 aa		10.49	□□□□□ -0.73
SH3YL1-222	ENST00000479739	GML	Q99445	158 aa		10.49	□□□□□ -0.73
SH3YL1-222	ENST00000479739	SRRT	Q9BXP5	876 aa	Known RBP	10.49	□□□□□ -0.73
SH3YL1-222	ENST00000479739	GPR108	Q9NPR9	543 aa		10.49	□□□□□ -0.73
SH3YL1-222	ENST00000479739	ADARB2	Q9NS39	739 aa	Known RBP	10.49	□□□□□ -0.73
SH3YL1-222	ENST00000479739	USP27X	A6NNY8	438 aa		10.49	□□□□□ -0.73
SH3YL1-222	ENST00000479739	MYO1B	O43795	1136 aa		10.49	□□□□□ -0.73
SH3YL1-222	ENST00000479739	DHX16	O60231	1041 aa	Known RBP	10.49	□□□□□ -0.73
SH3YL1-222	ENST00000479739	EVC	P57679	992 aa		10.49	□□□□□ -0.73
SH3YL1-222	ENST00000479739	LRRFIP1	Q32MZ4	808 aa	Known RBP	10.49	□□□□□ -0.73
SH3YL1-222	ENST00000479739	RSBN1L	Q6PCB5	846 aa	Predicted RBP	10.49	□□□□□ -0.73
SH3YL1-222	ENST00000479739	ATG9A	Q7Z3C6	839 aa		10.49	□□□□□ -0.73
SH3YL1-222	ENST00000479739	HOMEZ	Q8IX15	550 aa		10.49	□□□□□ -0.73
SH3YL1-222	ENST00000479739	SDF4	Q9BRK5	362 aa		10.49	□□□□□ -0.73
SH3YL1-222	ENST00000479739	KIAA1468	Q9P260	1216 aa		10.49	□□□□□ -0.73
SH3YL1-222	ENST00000479739	BCCIP	Q9P287	314 aa	Known RBP eCLIP	10.49	□□□□□ -0.73
SH3YL1-222	ENST00000479739	FBXO3	Q9UK99	471 aa		10.49	□□□□□ -0.73
SH3YL1-222	ENST00000479739	SHTN1	A0MZ66	631 aa		10.48	□□□□□ -0.73
SH3YL1-222	ENST00000479739	USP17L3	A6NCW0	530 aa		10.48	□□□□□ -0.73
SH3YL1-222	ENST00000479739	USP17L4	A6NCW7	530 aa		10.48	□□□□□ -0.73
SH3YL1-222	ENST00000479739		G3V3G9	751 aa		10.48	□□□□□ -0.73
SH3YL1-222	ENST00000479739	EYA2	O00167	538 aa		10.48	□□□□□ -0.73
SH3YL1-222	ENST00000479739	CTDNEP1	O95476	244 aa		10.48	□□□□□ -0.73
SH3YL1-222	ENST00000479739	SFPQ	P23246	707 aa	Known RBP eCLIP	10.48	□□□□□ -0.73
SH3YL1-222	ENST00000479739	CEBPZ	Q03701	1054 aa	Known RBP	10.48	□□□□□ -0.73
SH3YL1-222	ENST00000479739	EAPP	Q56P03	285 aa	Predicted RBP	10.48	□□□□□ -0.73
SH3YL1-222	ENST00000479739	DACT2	Q5SW24	774 aa		10.48	□□□□□ -0.73
SH3YL1-222	ENST00000479739	DCAF8	Q5TAQ9	597 aa		10.48	□□□□□ -0.73
SH3YL1-222	ENST00000479739	USP17L1	Q7RTZ2	530 aa		10.48	□□□□□ -0.73
SH3YL1-222	ENST00000479739	BRAP	Q7Z569	592 aa		10.48	□□□□□ -0.73
SH3YL1-222	ENST00000479739	CD209	Q9NNX6	404 aa		10.48	□□□□□ -0.73
SH3YL1-222	ENST00000479739	POLR3E	Q9NVU0	708 aa		10.48	□□□□□ -0.73
SH3YL1-222	ENST00000479739	CNOT7	Q9UIV1	285 aa	Known RBP	10.48	□□□□□ -0.73
SH3YL1-222	ENST00000479739	IKBKB	O14920	756 aa		10.48	□□□□□ -0.73
SH3YL1-222	ENST00000479739	PDE8B	O95263	885 aa		10.48	□□□□□ -0.73
SH3YL1-222	ENST00000479739	ITGBL1	O95965	494 aa	Predicted RBP	10.48	□□□□□ -0.73
SH3YL1-222	ENST00000479739	TPM1	P09493	284 aa		10.48	□□□□□ -0.73
SH3YL1-222	ENST00000479739	IL1R1	P14778	569 aa		10.48	□□□□□ -0.73
SH3YL1-222	ENST00000479739	HIRA	P54198	1017 aa	Predicted RBP	10.48	□□□□□ -0.73
SH3YL1-222	ENST00000479739	TFCP2	Q12800	502 aa		10.48	□□□□□ -0.73
SH3YL1-222	ENST00000479739	STRIP1	Q5VSL9	837 aa		10.48	□□□□□ -0.73
SH3YL1-222	ENST00000479739	FBXO38	Q6PIJ6	1188 aa		10.48	□□□□□ -0.73
SH3YL1-222	ENST00000479739	MICALL2	Q8IY33	904 aa		10.48	□□□□□ -0.73
SH3YL1-222	ENST00000479739	AGBL3	Q8NEM8	1001 aa		10.48	□□□□□ -0.73
SH3YL1-222	ENST00000479739	DNAJC2	Q99543	621 aa	Known RBP	10.48	□□□□□ -0.73
SH3YL1-222	ENST00000479739	ARGLU1	Q9NWB6	273 aa	Predicted RBP	10.48	□□□□□ -0.73
SH3YL1-222	ENST00000479739	PCDHA7	Q9UN72	937 aa		10.48	□□□□□ -0.73
SH3YL1-222	ENST00000479739	PHLPP2	Q6ZVD8	1323 aa		10.47	□□□□□ -0.73
SH3YL1-222	ENST00000479739	PASK	Q96RG2	1323 aa		10.47	□□□□□ -0.73
SH3YL1-222	ENST00000479739	CIAO1	O76071	339 aa		10.47	□□□□□ -0.73
SH3YL1-222	ENST00000479739	H2AFX	P16104	143 aa	Predicted RBP	10.47	□□□□□ -0.73
SH3YL1-222	ENST00000479739	FGFR2	P21802	821 aa		10.47	□□□□□ -0.73
SH3YL1-222	ENST00000479739	NLRP12	P59046	1061 aa		10.47	□□□□□ -0.73
SH3YL1-222	ENST00000479739	METTL24	Q5JXM2	366 aa		10.47	□□□□□ -0.73
SH3YL1-222	ENST00000479739	STOX1	Q6ZVD7	989 aa		10.47	□□□□□ -0.73
SH3YL1-222	ENST00000479739	NBPF11	Q86T75	865 aa		10.47	□□□□□ -0.73
SH3YL1-222	ENST00000479739	TRPM4	Q8TD43	1214 aa		10.47	□□□□□ -0.73
SH3YL1-222	ENST00000479739	PGAP2	Q9UHJ9	254 aa		10.47	□□□□□ -0.73
SH3YL1-222	ENST00000479739	CBFA2T2	O43439	604 aa		10.46	□□□□□ -0.73
SH3YL1-222	ENST00000479739	ATP8B1	O43520	1251 aa		10.46	□□□□□ -0.73
SH3YL1-222	ENST00000479739	PDIA3	P30101	505 aa	Known RBP	10.46	□□□□□ -0.73
SH3YL1-222	ENST00000479739	ZNF280A	P59817	542 aa	Predicted RBP	10.46	□□□□□ -0.73
SH3YL1-222	ENST00000479739	APOBR	Q0VD83	1088 aa		10.46	□□□□□ -0.73
SH3YL1-222	ENST00000479739	NAA30	Q147X3	362 aa	Predicted RBP	10.46	□□□□□ -0.73
SH3YL1-222	ENST00000479739	ARID5B	Q14865	1188 aa		10.46	□□□□□ -0.73
SH3YL1-222	ENST00000479739	STK38	Q15208	465 aa		10.46	□□□□□ -0.73
SH3YL1-222	ENST00000479739	SF3A1	Q15459	793 aa	Known RBP	10.46	□□□□□ -0.73
SH3YL1-222	ENST00000479739	ELF2	Q15723	593 aa		10.46	□□□□□ -0.73
SH3YL1-222	ENST00000479739	ZMYM1	Q5SVZ6	1142 aa		10.46	□□□□□ -0.73
SH3YL1-222	ENST00000479739	FCHSD1	Q86WN1	690 aa		10.46	□□□□□ -0.73
SH3YL1-222	ENST00000479739	LINC00301	Q8NCQ3	95 aa		10.46	□□□□□ -0.73
SH3YL1-222	ENST00000479739	EDC3	Q96F86	508 aa	Known RBP	10.46	□□□□□ -0.73
SH3YL1-222	ENST00000479739	FAM84B	Q96KN1	310 aa	Predicted RBP	10.46	□□□□□ -0.73
SH3YL1-222	ENST00000479739	PPP1R13B	Q96KQ4	1090 aa		10.46	□□□□□ -0.73
SH3YL1-222	ENST00000479739	TIGD1	Q96MW7	591 aa		10.46	□□□□□ -0.73
SH3YL1-222	ENST00000479739	TRMT1	Q9NXH9	659 aa	Known RBP	10.46	□□□□□ -0.73
SH3YL1-222	ENST00000479739	ARAP2	Q8WZ64	1704 aa		10.46	□□□□□ -0.73
SH3YL1-222	ENST00000479739		E7EWF7	191 aa		10.46	□□□□□ -0.74
SH3YL1-222	ENST00000479739		H7C1D1	291 aa		10.46	□□□□□ -0.74
SH3YL1-222	ENST00000479739	EGFR	P00533	1210 aa		10.46	□□□□□ -0.74
SH3YL1-222	ENST00000479739	SLC3A2	P08195	630 aa	Known RBP	10.46	□□□□□ -0.74
SH3YL1-222	ENST00000479739	APLP1	P51693	650 aa		10.46	□□□□□ -0.74
SH3YL1-222	ENST00000479739	E4F1	Q66K89	784 aa	Predicted RBP	10.46	□□□□□ -0.74
SH3YL1-222	ENST00000479739	CCDC129	Q6ZRS4	1044 aa		10.46	□□□□□ -0.74
SH3YL1-222	ENST00000479739	ZNF804A	Q7Z570	1209 aa		10.46	□□□□□ -0.74

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