RNA–Protein interactions for RNA: ENST00000473626.1

CNOT9-206, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-206ENST00000473626 TMEM87BQ96K49 555 aa8.7□□□□□ -1.02
CNOT9-206ENST00000473626 WDR64B1ANS9 1081 aa8.69□□□□□ -1.02
CNOT9-206ENST00000473626 FAM87AP0C7U9 286 aa8.69□□□□□ -1.02
CNOT9-206ENST00000473626 NASPP49321 788 aaPredicted RBP8.69□□□□□ -1.02
CNOT9-206ENST00000473626 ZAR1Q86SH2 424 aa8.69□□□□□ -1.02
CNOT9-206ENST00000473626 RIN3Q8TB24 985 aa8.69□□□□□ -1.02
CNOT9-206ENST00000473626 TACC3Q9Y6A5 838 aa8.69□□□□□ -1.02
CNOT9-206ENST00000473626 PRR36Q9H6K5 1346 aa8.69□□□□□ -1.02
CNOT9-206ENST00000473626 FBXW10Q5XX13 1052 aa8.68□□□□□ -1.02
CNOT9-206ENST00000473626 FAM13CQ8NE31 585 aa8.68□□□□□ -1.02
CNOT9-206ENST00000473626 RASGRP4Q8TDF6 673 aa8.68□□□□□ -1.02
CNOT9-206ENST00000473626 LRIG2O94898 1065 aa8.67□□□□□ -1.02
CNOT9-206ENST00000473626 SLITRK5O94991 958 aa8.67□□□□□ -1.02
CNOT9-206ENST00000473626 ZNF165P49910 485 aa8.67□□□□□ -1.02
CNOT9-206ENST00000473626 TMEM201Q5SNT2 666 aa8.67□□□□□ -1.02
CNOT9-206ENST00000473626 ZNF765Q7L2R6 523 aa8.67□□□□□ -1.02
CNOT9-206ENST00000473626 MCATQ8IVS2 390 aaKnown RBP8.67□□□□□ -1.02
CNOT9-206ENST00000473626 KCT2Q8NC54 265 aa8.67□□□□□ -1.02
CNOT9-206ENST00000473626 MIPEPQ99797 713 aa8.67□□□□□ -1.02
CNOT9-206ENST00000473626 DBNDD2Q9BQY9 259 aa8.67□□□□□ -1.02
CNOT9-206ENST00000473626 FOXQ1Q9C009 403 aa8.67□□□□□ -1.02
CNOT9-206ENST00000473626 EHMT1Q9H9B1 1298 aa8.67□□□□□ -1.02
CNOT9-206ENST00000473626 ADAM30Q9UKF2 790 aa8.67□□□□□ -1.02
CNOT9-206ENST00000473626 CNTNAP4Q9C0A0 1308 aa8.66□□□□□ -1.02
CNOT9-206ENST00000473626 K7ELQ4 463 aaPredicted RBP8.66□□□□□ -1.02
CNOT9-206ENST00000473626 CST3P01034 146 aaPredicted RBP8.66□□□□□ -1.02
CNOT9-206ENST00000473626 SLC6A19Q695T7 634 aa8.66□□□□□ -1.02
CNOT9-206ENST00000473626 MRPL41Q8IXM3 137 aaKnown RBP8.66□□□□□ -1.02
CNOT9-206ENST00000473626 FERD3LQ96RJ6 166 aa8.66□□□□□ -1.02
CNOT9-206ENST00000473626 DUSP23Q9BVJ7 150 aa8.66□□□□□ -1.02
CNOT9-206ENST00000473626 SLC22A31A6NKX4 558 aa8.65□□□□□ -1.02
CNOT9-206ENST00000473626 ATE1O95260 518 aa8.65□□□□□ -1.02
CNOT9-206ENST00000473626 NAALADL2Q58DX5 795 aa8.65□□□□□ -1.02
CNOT9-206ENST00000473626 ARSHQ5FYA8 562 aa8.65□□□□□ -1.02
CNOT9-206ENST00000473626 OVOS1Q6IE37 1185 aa8.65□□□□□ -1.02
CNOT9-206ENST00000473626 ZDHHC13Q8IUH4 622 aa8.65□□□□□ -1.02
CNOT9-206ENST00000473626 REXO1Q8N1G1 1221 aaKnown RBP8.65□□□□□ -1.02
CNOT9-206ENST00000473626 PRDM10Q9NQV6 1147 aa8.65□□□□□ -1.02
CNOT9-206ENST00000473626 U3KQE9 123 aa8.65□□□□□ -1.02
CNOT9-206ENST00000473626 TGFB1P01137 390 aa8.64□□□□□ -1.03
CNOT9-206ENST00000473626 ATF4P18848 351 aaPredicted RBP8.64□□□□□ -1.03
CNOT9-206ENST00000473626 DNAJA1P31689 397 aaKnown RBP8.64□□□□□ -1.03
CNOT9-206ENST00000473626 SOX9P48436 509 aa8.64□□□□□ -1.03
CNOT9-206ENST00000473626 OGFOD3Q6PK18 319 aa8.64□□□□□ -1.03
CNOT9-206ENST00000473626 RUFY4Q6ZNE9 571 aa8.64□□□□□ -1.03
CNOT9-206ENST00000473626 CDH24Q86UP0 819 aa8.64□□□□□ -1.03
CNOT9-206ENST00000473626 BAHD1Q8TBE0 780 aaPredicted RBP8.64□□□□□ -1.03
CNOT9-206ENST00000473626 FAM86C2PA6NEL3 165 aa8.63□□□□□ -1.03
CNOT9-206ENST00000473626 PRR19A6NJB7 356 aa8.63□□□□□ -1.03
CNOT9-206ENST00000473626 EOMESO95936 686 aa8.63□□□□□ -1.03
CNOT9-206ENST00000473626 POLR2BP30876 1174 aaKnown RBP8.63□□□□□ -1.03
CNOT9-206ENST00000473626 CAP2P40123 477 aa8.63□□□□□ -1.03
CNOT9-206ENST00000473626 ZC3H6P61129 1189 aaKnown RBP8.63□□□□□ -1.03
CNOT9-206ENST00000473626 KIF2CQ99661 725 aa8.63□□□□□ -1.03
CNOT9-206ENST00000473626 OSBPL1AQ9BXW6 950 aa8.63□□□□□ -1.03
CNOT9-206ENST00000473626 ZNRF3Q9ULT6 936 aa8.63□□□□□ -1.03
CNOT9-206ENST00000473626 LETMD1Q6P1Q0 360 aa8.62□□□□□ -1.03
CNOT9-206ENST00000473626 PHACTR4Q8IZ21 702 aa8.62□□□□□ -1.03
CNOT9-206ENST00000473626 FAM181AQ8N9Y4 354 aa8.62□□□□□ -1.03
CNOT9-206ENST00000473626 MFSD2AQ8NA29 543 aa8.62□□□□□ -1.03
CNOT9-206ENST00000473626 ATG4CQ96DT6 458 aa8.62□□□□□ -1.03
CNOT9-206ENST00000473626 LRRC4CQ9HCJ2 640 aa8.62□□□□□ -1.03
CNOT9-206ENST00000473626 ATG3Q9NT62 314 aa8.62□□□□□ -1.03
CNOT9-206ENST00000473626 MRVI1Q9Y6F6 885 aa8.62□□□□□ -1.03
CNOT9-206ENST00000473626 ADAM23O75077 832 aa8.61□□□□□ -1.03
CNOT9-206ENST00000473626 HOXA10P31260 410 aaPredicted RBP8.61□□□□□ -1.03
CNOT9-206ENST00000473626 GNL2Q13823 731 aaKnown RBP8.61□□□□□ -1.03
CNOT9-206ENST00000473626 FAM214BQ7L5A3 538 aa8.61□□□□□ -1.03
CNOT9-206ENST00000473626 PPP1R13LQ8WUF5 828 aa8.61□□□□□ -1.03
CNOT9-206ENST00000473626 HEXIM2Q96MH2 286 aaKnown RBP8.61□□□□□ -1.03
CNOT9-206ENST00000473626 GMIPQ9P107 970 aa8.61□□□□□ -1.03
CNOT9-206ENST00000473626 GSC2O15499 205 aa8.6□□□□□ -1.03
CNOT9-206ENST00000473626 YARSP54577 528 aaKnown RBP8.6□□□□□ -1.03
CNOT9-206ENST00000473626 LSRQ86X29 649 aaPredicted RBP8.6□□□□□ -1.03
CNOT9-206ENST00000473626 SLFN12Q8IYM2 578 aa8.6□□□□□ -1.03
CNOT9-206ENST00000473626 CPLX3Q8WVH0 158 aa8.6□□□□□ -1.03
CNOT9-206ENST00000473626 TMEM40Q8WWA1 233 aa8.6□□□□□ -1.03
CNOT9-206ENST00000473626 SRRTQ9BXP5 876 aaKnown RBP8.6□□□□□ -1.03
CNOT9-206ENST00000473626 RB1CC1Q8TDY2 1594 aa8.6□□□□□ -1.03
CNOT9-206ENST00000473626 RAG1P15918 1043 aa8.59□□□□□ -1.03
CNOT9-206ENST00000473626 ARID5AQ03989 594 aa8.59□□□□□ -1.03
CNOT9-206ENST00000473626 DUSP27Q5VZP5 1158 aa8.59□□□□□ -1.03
CNOT9-206ENST00000473626 NLRC3Q7RTR2 1065 aa8.59□□□□□ -1.03
CNOT9-206ENST00000473626 VPS37DQ86XT2 251 aa8.59□□□□□ -1.03
CNOT9-206ENST00000473626 MCF2L2Q86YR7 1114 aa8.59□□□□□ -1.03
CNOT9-206ENST00000473626 DNAJB8Q8NHS0 232 aa8.59□□□□□ -1.03
CNOT9-206ENST00000473626 GIMAP7Q8NHV1 300 aa8.59□□□□□ -1.03
CNOT9-206ENST00000473626 SHDQ96IW2 340 aa8.59□□□□□ -1.03
CNOT9-206ENST00000473626 SEC16BQ96JE7 1060 aa8.59□□□□□ -1.03
CNOT9-206ENST00000473626 SPATA32Q96LK8 384 aa8.59□□□□□ -1.03
CNOT9-206ENST00000473626 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.59□□□□□ -1.035e-6■■■□□ 16.1
CNOT9-206ENST00000473626 CNNM2Q9H8M5 875 aa8.59□□□□□ -1.03
CNOT9-206ENST00000473626 TPX2Q9ULW0 747 aaKnown RBP8.59□□□□□ -1.03
CNOT9-206ENST00000473626 PRR33A8MZF0 331 aa8.58□□□□□ -1.04
CNOT9-206ENST00000473626 ACRP10323 421 aa8.58□□□□□ -1.04
CNOT9-206ENST00000473626 NME1P15531 152 aaKnown RBP8.58□□□□□ -1.04
CNOT9-206ENST00000473626 EIF6P56537 245 aaKnown RBP8.58□□□□□ -1.04
CNOT9-206ENST00000473626 COL9A2Q14055 689 aaPredicted RBP8.58□□□□□ -1.04
CNOT9-206ENST00000473626 MLECQ14165 292 aa8.58□□□□□ -1.04
CNOT9-206ENST00000473626 FAM169BQ8N8A8 192 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms