RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 SFRP5Q5T4F7 317 aa8.67□□□□□ -1.02
CD46-213ENST00000471987 DNAJC14Q6Y2X3 702 aaPredicted RBP8.67□□□□□ -1.02
CD46-213ENST00000471987 C22orf34Q6ZV56 151 aa8.67□□□□□ -1.02
CD46-213ENST00000471987 POU5F2Q8N7G0 328 aa8.67□□□□□ -1.02
CD46-213ENST00000471987 NOC4LQ9BVI4 516 aaKnown RBP8.67□□□□□ -1.02
CD46-213ENST00000471987 PITPNM2Q9BZ72 1349 aa8.67□□□□□ -1.02
CD46-213ENST00000471987 CST3P01034 146 aaPredicted RBP8.66□□□□□ -1.02
CD46-213ENST00000471987 ZNF865P0CJ78 1059 aaPredicted RBP8.66□□□□□ -1.02
CD46-213ENST00000471987 ZP2Q05996 745 aa8.66□□□□□ -1.02
CD46-213ENST00000471987 TAF1CQ15572 869 aaPredicted RBP8.66□□□□□ -1.02
CD46-213ENST00000471987 TSNAXIP1Q2TAA8 658 aa8.66□□□□□ -1.02
CD46-213ENST00000471987 DIEXFQ68CQ4 756 aaKnown RBP8.66□□□□□ -1.02
CD46-213ENST00000471987 LETMD1Q6P1Q0 360 aa8.66□□□□□ -1.02
CD46-213ENST00000471987 MFSD4AQ8N468 514 aa8.66□□□□□ -1.02
CD46-213ENST00000471987 PRAMEF13Q5VWM6 474 aa8.65□□□□□ -1.02
CD46-213ENST00000471987 TMC4Q7Z404 712 aa8.65□□□□□ -1.02
CD46-213ENST00000471987 FAM168AQ92567 244 aa8.65□□□□□ -1.02
CD46-213ENST00000471987 LMCD1Q9NZU5 365 aa8.65□□□□□ -1.02
CD46-213ENST00000471987 PGRP06401 933 aa8.64□□□□□ -1.03
CD46-213ENST00000471987 TFE3P19532 575 aaPredicted RBP8.64□□□□□ -1.03
CD46-213ENST00000471987 PDE4BQ07343 736 aa8.64□□□□□ -1.03
CD46-213ENST00000471987 MRPL41Q8IXM3 137 aaKnown RBP8.64□□□□□ -1.03
CD46-213ENST00000471987 COX4I2Q96KJ9 171 aa8.64□□□□□ -1.03
CD46-213ENST00000471987 KRTAP4-9Q9BYQ8 210 aa8.64□□□□□ -1.03
CD46-213ENST00000471987 PRDM7Q9NQW5 492 aa8.64□□□□□ -1.03
CD46-213ENST00000471987 CARMIL2Q6F5E8 1435 aa8.63□□□□□ -1.03
CD46-213ENST00000471987 PRR33A8MZF0 331 aa8.63□□□□□ -1.03
CD46-213ENST00000471987 CYP7A1P22680 504 aa8.63□□□□□ -1.03
CD46-213ENST00000471987 RPL6Q02878 288 aaKnown RBP8.63□□□□□ -1.03
CD46-213ENST00000471987 FLAD1Q8NFF5 587 aa8.63□□□□□ -1.03
CD46-213ENST00000471987 RIN3Q8TB24 985 aa8.63□□□□□ -1.03
CD46-213ENST00000471987 XAGE3Q8WTP9 111 aa8.63□□□□□ -1.03
CD46-213ENST00000471987 HSPA12BQ96MM6 686 aa8.63□□□□□ -1.03
CD46-213ENST00000471987 CAPN6Q9Y6Q1 641 aa8.63□□□□□ -1.03
CD46-213ENST00000471987 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.63□□□□□ -1.03
CD46-213ENST00000471987 USP31Q70CQ4 1352 aa8.62□□□□□ -1.03
CD46-213ENST00000471987 CNTNAP4Q9C0A0 1308 aa8.62□□□□□ -1.03
CD46-213ENST00000471987 CDKAL1Q5VV42 579 aa8.62□□□□□ -1.03
CD46-213ENST00000471987 SLC6A19Q695T7 634 aa8.62□□□□□ -1.03
CD46-213ENST00000471987 FBXO33Q7Z6M2 555 aa8.62□□□□□ -1.03
CD46-213ENST00000471987 TMEM40Q8WWA1 233 aa8.62□□□□□ -1.03
CD46-213ENST00000471987 SEMA3GQ9NS98 782 aa8.62□□□□□ -1.03
CD46-213ENST00000471987 TJP2Q9UDY2 1190 aa8.62□□□□□ -1.03
CD46-213ENST00000471987 TLR6Q9Y2C9 796 aa8.62□□□□□ -1.03
CD46-213ENST00000471987 CTSHP09668 335 aa8.61□□□□□ -1.03
CD46-213ENST00000471987 KIR3DL1P43629 444 aa8.61□□□□□ -1.03
CD46-213ENST00000471987 CCDC84Q86UT8 332 aaPredicted RBP8.61□□□□□ -1.03
CD46-213ENST00000471987 PHC3Q8NDX5 983 aa8.61□□□□□ -1.03
CD46-213ENST00000471987 JARID2Q92833 1246 aaPredicted RBP8.61□□□□□ -1.03
CD46-213ENST00000471987 CRELD1Q96HD1 420 aa8.61□□□□□ -1.03
CD46-213ENST00000471987 TMEM87BQ96K49 555 aa8.61□□□□□ -1.03
CD46-213ENST00000471987 FAM161BQ96MY7 647 aa8.61□□□□□ -1.03
CD46-213ENST00000471987 ATP13A1Q9HD20 1204 aa8.61□□□□□ -1.03
CD46-213ENST00000471987 ADAM30Q9UKF2 790 aa8.61□□□□□ -1.03
CD46-213ENST00000471987 SORBS3O60504 671 aa8.6□□□□□ -1.03
CD46-213ENST00000471987 CBX7O95931 251 aa8.6□□□□□ -1.03
CD46-213ENST00000471987 ERCC3P19447 782 aa8.6□□□□□ -1.03
CD46-213ENST00000471987 ITGAEP38570 1179 aa8.6□□□□□ -1.03
CD46-213ENST00000471987 THAP5Q7Z6K1 395 aa8.6□□□□□ -1.03
CD46-213ENST00000471987 KRTAP4-2Q9BYR5 136 aa8.6□□□□□ -1.03
CD46-213ENST00000471987 ST14Q9Y5Y6 855 aa8.6□□□□□ -1.03
CD46-213ENST00000471987 H3BS24 57 aa8.59□□□□□ -1.03
CD46-213ENST00000471987 C8AP07357 584 aa8.59□□□□□ -1.03
CD46-213ENST00000471987 ETV3P41162 512 aa8.59□□□□□ -1.03
CD46-213ENST00000471987 CDH24Q86UP0 819 aa8.59□□□□□ -1.03
CD46-213ENST00000471987 MCATQ8IVS2 390 aaKnown RBP8.59□□□□□ -1.03
CD46-213ENST00000471987 DPH2Q9BQC3 489 aaPredicted RBP8.59□□□□□ -1.03
CD46-213ENST00000471987 CARS2Q9HA77 564 aaKnown RBP8.59□□□□□ -1.03
CD46-213ENST00000471987 MRS2Q9HD23 443 aa8.59□□□□□ -1.03
CD46-213ENST00000471987 BPNT1O95861 308 aa8.58□□□□□ -1.04
CD46-213ENST00000471987 ZSWIM9Q86XI8 627 aa8.58□□□□□ -1.04
CD46-213ENST00000471987 CTNND2Q9UQB3 1225 aa8.58□□□□□ -1.04
CD46-213ENST00000471987 AFMP43652 599 aa8.57□□□□□ -1.04
CD46-213ENST00000471987 LMNB2Q03252 620 aa8.57□□□□□ -1.04
CD46-213ENST00000471987 CCDC27Q2M243 656 aa8.57□□□□□ -1.04
CD46-213ENST00000471987 PIWIL2Q8TC59 973 aaKnown RBP8.57□□□□□ -1.04
CD46-213ENST00000471987 ACSF2Q96CM8 615 aaPredicted RBP8.57□□□□□ -1.04
CD46-213ENST00000471987 VTI1BQ9UEU0 232 aa8.57□□□□□ -1.04
CD46-213ENST00000471987 CILPO75339 1184 aa8.56□□□□□ -1.04
CD46-213ENST00000471987 FARP2O94887 1054 aaPredicted RBP8.56□□□□□ -1.04
CD46-213ENST00000471987 TNK2Q07912 1038 aa8.56□□□□□ -1.04
CD46-213ENST00000471987 CAMK2GQ13555 558 aaPredicted RBP8.56□□□□□ -1.04
CD46-213ENST00000471987 KCNMB1Q16558 191 aa8.56□□□□□ -1.04
CD46-213ENST00000471987 BNC2Q6ZN30 1099 aaPredicted RBP8.56□□□□□ -1.04
CD46-213ENST00000471987 UBE2FQ969M7 185 aa8.56□□□□□ -1.04
CD46-213ENST00000471987 PLCG1P19174 1290 aa8.55□□□□□ -1.04
CD46-213ENST00000471987 PWP1Q13610 501 aa8.55□□□□□ -1.04
CD46-213ENST00000471987 ZNF648Q5T619 568 aaPredicted RBP8.55□□□□□ -1.04
CD46-213ENST00000471987 RELL1Q8IUW5 271 aa8.55□□□□□ -1.04
CD46-213ENST00000471987 DNAJB8Q8NHS0 232 aa8.55□□□□□ -1.04
CD46-213ENST00000471987 GATAD2BQ8WXI9 593 aa8.55□□□□□ -1.04
CD46-213ENST00000471987 CCDC120Q96HB5 630 aa8.55□□□□□ -1.04
CD46-213ENST00000471987 FAM53CQ9NYF3 392 aa8.55□□□□□ -1.04
CD46-213ENST00000471987 ZSWIM5Q9P217 1185 aa8.55□□□□□ -1.04
CD46-213ENST00000471987 CEP131Q9UPN4 1083 aa8.55□□□□□ -1.04
CD46-213ENST00000471987 FAM221AA4D161 298 aa8.54□□□□□ -1.04
CD46-213ENST00000471987 PF4P02776 101 aa8.54□□□□□ -1.04
CD46-213ENST00000471987 YARSP54577 528 aaKnown RBP8.54□□□□□ -1.04
CD46-213ENST00000471987 FZD5Q13467 585 aa8.54□□□□□ -1.04
CD46-213ENST00000471987 CYB5D2Q8WUJ1 264 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms