RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 NOL9Q5SY16 702 aaKnown RBP17.83■□□□□ 0.44
CDC42SE1-203ENST00000470278 CASC1Q6TDU7 716 aa17.83■□□□□ 0.44
CDC42SE1-203ENST00000470278 REM2Q8IYK8 340 aaPredicted RBP17.83■□□□□ 0.44
CDC42SE1-203ENST00000470278 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.83■□□□□ 0.44
CDC42SE1-203ENST00000470278 HPS5Q9UPZ3 1129 aa17.83■□□□□ 0.44
CDC42SE1-203ENST00000470278 KIAA0100Q14667 2235 aaKnown RBP17.83■□□□□ 0.44
CDC42SE1-203ENST00000470278 MAP3K9P80192 1104 aa17.82■□□□□ 0.44
CDC42SE1-203ENST00000470278 TATDN1Q6P1N9 297 aa17.82■□□□□ 0.44
CDC42SE1-203ENST00000470278 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.82■□□□□ 0.44
CDC42SE1-203ENST00000470278 CRACR2BQ8N4Y2 399 aaPredicted RBP17.82■□□□□ 0.44
CDC42SE1-203ENST00000470278 ESYT1Q9BSJ8 1104 aa17.82■□□□□ 0.44
CDC42SE1-203ENST00000470278 CFHR5Q9BXR6 569 aa17.82■□□□□ 0.44
CDC42SE1-203ENST00000470278 TRIM34Q9BYJ4 488 aa17.82■□□□□ 0.44
CDC42SE1-203ENST00000470278 SWAP70Q9UH65 585 aa17.82■□□□□ 0.44
CDC42SE1-203ENST00000470278 CYP2D6P10635 497 aa17.81■□□□□ 0.44
CDC42SE1-203ENST00000470278 VGLL4Q14135 290 aa17.81■□□□□ 0.44
CDC42SE1-203ENST00000470278 SLC4A8Q2Y0W8 1093 aa17.81■□□□□ 0.44
CDC42SE1-203ENST00000470278 NOM1Q5C9Z4 860 aaKnown RBP17.81■□□□□ 0.44
CDC42SE1-203ENST00000470278 SPRYD7Q5W111 196 aa17.81■□□□□ 0.44
CDC42SE1-203ENST00000470278 C16orf86Q6ZW13 317 aa17.81■□□□□ 0.44
CDC42SE1-203ENST00000470278 CLMNQ96JQ2 1002 aa17.81■□□□□ 0.44
CDC42SE1-203ENST00000470278 CSADQ9Y600 493 aa17.81■□□□□ 0.44
CDC42SE1-203ENST00000470278 ZSWIM8A7E2V4 1837 aa17.8■□□□□ 0.44
CDC42SE1-203ENST00000470278 FAM196BA6NMK8 535 aa17.8■□□□□ 0.44
CDC42SE1-203ENST00000470278 CTNND1O60716 968 aaKnown RBP17.8■□□□□ 0.44
CDC42SE1-203ENST00000470278 FGAP02671 866 aa17.8■□□□□ 0.44
CDC42SE1-203ENST00000470278 SLURP2P0DP57 97 aa17.8■□□□□ 0.44
CDC42SE1-203ENST00000470278 INPP5BP32019 993 aa17.8■□□□□ 0.44
CDC42SE1-203ENST00000470278 GJA5P36382 358 aa17.8■□□□□ 0.44
CDC42SE1-203ENST00000470278 EVX2Q03828 476 aa17.8■□□□□ 0.44
CDC42SE1-203ENST00000470278 GINM1Q9NU53 330 aa17.8■□□□□ 0.44
CDC42SE1-203ENST00000470278 ANAPC4Q9UJX5 808 aa17.8■□□□□ 0.44
CDC42SE1-203ENST00000470278 SNCAIPQ9Y6H5 919 aa17.8■□□□□ 0.44
CDC42SE1-203ENST00000470278 CYP2D7A0A087X1C5 515 aa17.79■□□□□ 0.44
CDC42SE1-203ENST00000470278 GPR25O00155 361 aa17.79■□□□□ 0.44
CDC42SE1-203ENST00000470278 SHMT1P34896 483 aa17.79■□□□□ 0.44
CDC42SE1-203ENST00000470278 CAP1Q01518 475 aa17.79■□□□□ 0.44
CDC42SE1-203ENST00000470278 PPARAQ07869 468 aa17.79■□□□□ 0.44
CDC42SE1-203ENST00000470278 SCYL3Q8IZE3 742 aa17.79■□□□□ 0.44
CDC42SE1-203ENST00000470278 PHIPQ8WWQ0 1821 aa17.79■□□□□ 0.44
CDC42SE1-203ENST00000470278 GREB1LQ9C091 1923 aaPredicted RBP17.78■□□□□ 0.44
CDC42SE1-203ENST00000470278 SPDYE5A6NIY4 337 aa17.78■□□□□ 0.44
CDC42SE1-203ENST00000470278 CAP2P40123 477 aa17.78■□□□□ 0.44
CDC42SE1-203ENST00000470278 ZKSCAN4Q969J2 545 aaPredicted RBP17.78■□□□□ 0.44
CDC42SE1-203ENST00000470278 ZNF287Q9HBT7 754 aa17.78■□□□□ 0.44
CDC42SE1-203ENST00000470278 MINDY4BA8MYZ0 360 aa17.77■□□□□ 0.44
CDC42SE1-203ENST00000470278 SMIM22K7EJ46 135 aa17.77■□□□□ 0.44
CDC42SE1-203ENST00000470278 IGF2BP3O00425 579 aaKnown RBP eCLIP17.77■□□□□ 0.44
CDC42SE1-203ENST00000470278 SLC3A2P08195 630 aaKnown RBP17.77■□□□□ 0.44
CDC42SE1-203ENST00000470278 ZBTB48P10074 688 aaPredicted RBP17.77■□□□□ 0.44
CDC42SE1-203ENST00000470278 RRP1BQ14684 758 aaKnown RBP17.77■□□□□ 0.44
CDC42SE1-203ENST00000470278 ERO1BQ86YB8 467 aa17.77■□□□□ 0.44
CDC42SE1-203ENST00000470278 DYNLL2Q96FJ2 89 aa17.77■□□□□ 0.44
CDC42SE1-203ENST00000470278 CTNNA3Q9UI47 895 aa17.77■□□□□ 0.44
CDC42SE1-203ENST00000470278 ASNSP08243 561 aa17.76■□□□□ 0.43
CDC42SE1-203ENST00000470278 PCP11498 1178 aaKnown RBP17.76■□□□□ 0.43
CDC42SE1-203ENST00000470278 CDK8P49336 464 aa17.76■□□□□ 0.43
CDC42SE1-203ENST00000470278 SLC44A5Q8NCS7 719 aa17.76■□□□□ 0.43
CDC42SE1-203ENST00000470278 MAP4K1Q92918 833 aa17.76■□□□□ 0.43
CDC42SE1-203ENST00000470278 SLC10A4Q96EP9 437 aa17.76■□□□□ 0.43
CDC42SE1-203ENST00000470278 LSG1Q9H089 658 aaKnown RBP17.76■□□□□ 0.43
CDC42SE1-203ENST00000470278 PICK1Q9NRD5 415 aa17.76■□□□□ 0.43
CDC42SE1-203ENST00000470278 ZBTB21Q9ULJ3 1066 aa17.76■□□□□ 0.43
CDC42SE1-203ENST00000470278 FGRP09769 529 aa17.75■□□□□ 0.43
CDC42SE1-203ENST00000470278 NT5C2P49902 561 aa17.75■□□□□ 0.43
CDC42SE1-203ENST00000470278 PTH1RQ03431 593 aa17.75■□□□□ 0.43
CDC42SE1-203ENST00000470278 PPATQ06203 517 aa17.75■□□□□ 0.43
CDC42SE1-203ENST00000470278 PDE4BQ07343 736 aa17.75■□□□□ 0.43
CDC42SE1-203ENST00000470278 CERKLQ49MI3 558 aaPredicted RBP17.75■□□□□ 0.43
CDC42SE1-203ENST00000470278 KIAA1211Q6ZU35 1233 aa17.75■□□□□ 0.43
CDC42SE1-203ENST00000470278 WNK4Q96J92 1243 aa17.75■□□□□ 0.43
CDC42SE1-203ENST00000470278 CCDC17Q96LX7 622 aa17.75■□□□□ 0.43
CDC42SE1-203ENST00000470278 TBC1D2Q9BYX2 928 aa17.75■□□□□ 0.43
CDC42SE1-203ENST00000470278 ELP3Q9H9T3 547 aa17.75■□□□□ 0.43
CDC42SE1-203ENST00000470278 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.75■□□□□ 0.43
CDC42SE1-203ENST00000470278 U3KPZ7 1027 aaPredicted RBP17.75■□□□□ 0.43
CDC42SE1-203ENST00000470278 PLIN4Q96Q06 1357 aa17.75■□□□□ 0.43
CDC42SE1-203ENST00000470278 PTPRFP10586 1907 aa17.74■□□□□ 0.43
CDC42SE1-203ENST00000470278 PTPRAP18433 802 aa17.74■□□□□ 0.43
CDC42SE1-203ENST00000470278 PPIL2Q13356 520 aa17.74■□□□□ 0.43
CDC42SE1-203ENST00000470278 OPTNQ96CV9 577 aa17.74■□□□□ 0.43
CDC42SE1-203ENST00000470278 NBPF3Q9H094 633 aa17.74■□□□□ 0.43
CDC42SE1-203ENST00000470278 ZNF213O14771 459 aa17.73■□□□□ 0.43
CDC42SE1-203ENST00000470278 ORC4O43929 436 aa17.73■□□□□ 0.43
CDC42SE1-203ENST00000470278 GDF11O95390 407 aa17.73■□□□□ 0.43
CDC42SE1-203ENST00000470278 RASA1P20936 1047 aa17.73■□□□□ 0.43
CDC42SE1-203ENST00000470278 SREBF2Q12772 1141 aa17.73■□□□□ 0.43
CDC42SE1-203ENST00000470278 IMMTQ16891 758 aaKnown RBP17.73■□□□□ 0.43
CDC42SE1-203ENST00000470278 ABCB5Q2M3G0 1257 aa17.73■□□□□ 0.43
CDC42SE1-203ENST00000470278 IFNL1Q8IU54 200 aa17.73■□□□□ 0.43
CDC42SE1-203ENST00000470278 STAG1Q8WVM7 1258 aa17.73■□□□□ 0.43
CDC42SE1-203ENST00000470278 ANO2Q9NQ90 1003 aa17.73■□□□□ 0.43
CDC42SE1-203ENST00000470278 CEP290O15078 2479 aa17.73■□□□□ 0.43
CDC42SE1-203ENST00000470278 LOC285556D6RIA3 1793 aa17.72■□□□□ 0.43
CDC42SE1-203ENST00000470278 EPB41L2O43491 1005 aaKnown RBP17.72■□□□□ 0.43
CDC42SE1-203ENST00000470278 GH2P01242 217 aa17.72■□□□□ 0.43
CDC42SE1-203ENST00000470278 JAG1P78504 1218 aa17.72■□□□□ 0.43
CDC42SE1-203ENST00000470278 CTDSPL2Q05D32 466 aa17.72■□□□□ 0.43
CDC42SE1-203ENST00000470278 PKN2Q16513 984 aaKnown RBP17.72■□□□□ 0.43
CDC42SE1-203ENST00000470278 FBXO46Q6PJ61 603 aaPredicted RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms