RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 RRP1BQ14684 758 aaKnown RBP18.98■□□□□ 0.63
GPC1-207ENST00000466624 AKNAD1Q5T1N1 836 aa18.98■□□□□ 0.63
GPC1-207ENST00000466624 ZKSCAN4Q969J2 545 aaPredicted RBP18.98■□□□□ 0.63
GPC1-207ENST00000466624 MKNK2Q9HBH9 465 aa18.98■□□□□ 0.63
GPC1-207ENST00000466624 SNCAIPQ9Y6H5 919 aa18.98■□□□□ 0.63
GPC1-207ENST00000466624 ASNSP08243 561 aa18.97■□□□□ 0.63
GPC1-207ENST00000466624 RASA1P20936 1047 aa18.97■□□□□ 0.63
GPC1-207ENST00000466624 RNF20Q5VTR2 975 aa18.97■□□□□ 0.63
GPC1-207ENST00000466624 RGMBQ6NW40 437 aa18.97■□□□□ 0.63
GPC1-207ENST00000466624 MFSD6Q6ZSS7 791 aa18.97■□□□□ 0.63
GPC1-207ENST00000466624 TBC1D10CQ8IV04 446 aa18.97■□□□□ 0.63
GPC1-207ENST00000466624 PLIN4Q96Q06 1357 aa18.96■□□□□ 0.63
GPC1-207ENST00000466624 ABCB5Q2M3G0 1257 aa18.96■□□□□ 0.63
GPC1-207ENST00000466624 CREB3L3Q68CJ9 461 aa18.96■□□□□ 0.63
GPC1-207ENST00000466624 ERO1BQ86YB8 467 aa18.96■□□□□ 0.63
GPC1-207ENST00000466624 SLC10A4Q96EP9 437 aa18.96■□□□□ 0.63
GPC1-207ENST00000466624 CLMNQ96JQ2 1002 aa18.96■□□□□ 0.63
GPC1-207ENST00000466624 USP26Q9BXU7 913 aa18.96■□□□□ 0.63
GPC1-207ENST00000466624 TBC1D2Q9BYX2 928 aa18.96■□□□□ 0.63
GPC1-207ENST00000466624 CABP5Q9NP86 173 aa18.96■□□□□ 0.63
GPC1-207ENST00000466624 ZBTB21Q9ULJ3 1066 aa18.96■□□□□ 0.63
GPC1-207ENST00000466624 TACC3Q9Y6A5 838 aa18.96■□□□□ 0.63
GPC1-207ENST00000466624 SPDYE5A6NIY4 337 aa18.95■□□□□ 0.62
GPC1-207ENST00000466624 SLC27A2O14975 620 aa18.95■□□□□ 0.62
GPC1-207ENST00000466624 GDF11O95390 407 aa18.95■□□□□ 0.62
GPC1-207ENST00000466624 HSPA4P34932 840 aa18.95■□□□□ 0.62
GPC1-207ENST00000466624 TMEM179Q6ZVK1 233 aa18.95■□□□□ 0.62
GPC1-207ENST00000466624 ZNF444Q8N0Y2 327 aaPredicted RBP18.95■□□□□ 0.62
GPC1-207ENST00000466624 KCNB2Q92953 911 aa18.95■□□□□ 0.62
GPC1-207ENST00000466624 CNNM2Q9H8M5 875 aa18.95■□□□□ 0.62
GPC1-207ENST00000466624 PICK1Q9NRD5 415 aa18.95■□□□□ 0.62
GPC1-207ENST00000466624 PTPRFP10586 1907 aa18.95■□□□□ 0.62
GPC1-207ENST00000466624 PRDM1O75626 825 aa18.94■□□□□ 0.62
GPC1-207ENST00000466624 GH2P01242 217 aa18.94■□□□□ 0.62
GPC1-207ENST00000466624 ZBTB48P10074 688 aaPredicted RBP18.94■□□□□ 0.62
GPC1-207ENST00000466624 AKR1B1P15121 316 aa18.94■□□□□ 0.62
GPC1-207ENST00000466624 PTPRAP18433 802 aa18.94■□□□□ 0.62
GPC1-207ENST00000466624 ZNF157P51786 506 aaPredicted RBP18.94■□□□□ 0.62
GPC1-207ENST00000466624 PPATQ06203 517 aa18.94■□□□□ 0.62
GPC1-207ENST00000466624 DEFB115Q30KQ5 88 aa18.94■□□□□ 0.62
GPC1-207ENST00000466624 TSGA10IPQ3SY00 556 aa18.94■□□□□ 0.62
GPC1-207ENST00000466624 STK11IPQ8N1F8 1099 aa18.94■□□□□ 0.62
GPC1-207ENST00000466624 CCDC102AQ96A19 550 aa18.94■□□□□ 0.62
GPC1-207ENST00000466624 KRT23Q9C075 422 aa18.94■□□□□ 0.62
GPC1-207ENST00000466624 ELP3Q9H9T3 547 aa18.94■□□□□ 0.62
GPC1-207ENST00000466624 SLC10A3P09131 477 aa18.93■□□□□ 0.62
GPC1-207ENST00000466624 JAG1P78504 1218 aa18.93■□□□□ 0.62
GPC1-207ENST00000466624 RASAL3Q86YV0 1011 aa18.93■□□□□ 0.62
GPC1-207ENST00000466624 NEDD1Q8NHV4 660 aa18.93■□□□□ 0.62
GPC1-207ENST00000466624 ESR2Q92731 530 aa18.93■□□□□ 0.62
GPC1-207ENST00000466624 NEDD4P46934 1319 aa18.93■□□□□ 0.62
GPC1-207ENST00000466624 MYH4Q9Y623 1939 aa18.92■□□□□ 0.62
GPC1-207ENST00000466624 USP17L5A8MUK1 530 aa18.92■□□□□ 0.62
GPC1-207ENST00000466624 E7EWF7 191 aa18.92■□□□□ 0.62
GPC1-207ENST00000466624 MPHOSPH10O00566 681 aaKnown RBP18.92■□□□□ 0.62
GPC1-207ENST00000466624 TSPY3P0CV98 308 aa18.92■□□□□ 0.62
GPC1-207ENST00000466624 TSPY8P0CW00 308 aa18.92■□□□□ 0.62
GPC1-207ENST00000466624 ZKSCAN1P17029 563 aaPredicted RBP18.92■□□□□ 0.62
GPC1-207ENST00000466624 MCCP23508 829 aa18.92■□□□□ 0.62
GPC1-207ENST00000466624 GUCY1A2P33402 732 aa18.92■□□□□ 0.62
GPC1-207ENST00000466624 TRDNQ13061 729 aa18.92■□□□□ 0.62
GPC1-207ENST00000466624 PPIL2Q13356 520 aa18.92■□□□□ 0.62
GPC1-207ENST00000466624 OPTNQ96CV9 577 aa18.92■□□□□ 0.62
GPC1-207ENST00000466624 WNK4Q96J92 1243 aa18.92■□□□□ 0.62
GPC1-207ENST00000466624 WDR18Q9BV38 432 aa18.92■□□□□ 0.62
GPC1-207ENST00000466624 AS3MTQ9HBK9 375 aa18.92■□□□□ 0.62
GPC1-207ENST00000466624 INCENPQ9NQS7 918 aa18.92■□□□□ 0.62
GPC1-207ENST00000466624 TOMM22Q9NS69 142 aa18.92■□□□□ 0.62
GPC1-207ENST00000466624 THSD7BQ9C0I4 1608 aa18.92■□□□□ 0.62
GPC1-207ENST00000466624 IGKV6D-41A0A0C4DH26 115 aa18.91■□□□□ 0.62
GPC1-207ENST00000466624 TSPY2A6NKD2 308 aa18.91■□□□□ 0.62
GPC1-207ENST00000466624 RANBP6O60518 1105 aaKnown RBP18.91■□□□□ 0.62
GPC1-207ENST00000466624 SEC24BO95487 1268 aa18.91■□□□□ 0.62
GPC1-207ENST00000466624 ECE1P42892 770 aa18.91■□□□□ 0.62
GPC1-207ENST00000466624 TFAP4Q01664 338 aa18.91■□□□□ 0.62
GPC1-207ENST00000466624 KRT32Q14532 448 aa18.91■□□□□ 0.62
GPC1-207ENST00000466624 SHROOM1Q2M3G4 852 aaPredicted RBP18.91■□□□□ 0.62
GPC1-207ENST00000466624 PPP4R3BQ5MIZ7 849 aa18.91■□□□□ 0.62
GPC1-207ENST00000466624 SPRYD7Q5W111 196 aa18.91■□□□□ 0.62
GPC1-207ENST00000466624 NCOA7Q8NI08 942 aa18.91■□□□□ 0.62
GPC1-207ENST00000466624 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.91■□□□□ 0.62
GPC1-207ENST00000466624 KANSL2Q9H9L4 492 aa18.91■□□□□ 0.62
GPC1-207ENST00000466624 FAM155AB1AL88 458 aaPredicted RBP18.9■□□□□ 0.62
GPC1-207ENST00000466624 SEPT2Q15019 361 aa18.9■□□□□ 0.62
GPC1-207ENST00000466624 RRP12Q5JTH9 1297 aaKnown RBP18.9■□□□□ 0.62
GPC1-207ENST00000466624 STOX1Q6ZVD7 989 aa18.9■□□□□ 0.62
GPC1-207ENST00000466624 OTUD5Q96G74 571 aa18.9■□□□□ 0.62
GPC1-207ENST00000466624 TCP11L1Q9NUJ3 509 aa18.9■□□□□ 0.62
GPC1-207ENST00000466624 KCNH4Q9UQ05 1017 aa18.9■□□□□ 0.62
GPC1-207ENST00000466624 AFG3L2Q9Y4W6 797 aa18.9■□□□□ 0.62
GPC1-207ENST00000466624 TAF6LQ9Y6J9 622 aa18.9■□□□□ 0.62
GPC1-207ENST00000466624 ZHX2Q9Y6X8 837 aa18.9■□□□□ 0.62
GPC1-207ENST00000466624 LOC285556D6RIA3 1793 aa18.89■□□□□ 0.61
GPC1-207ENST00000466624 CXCL11O14625 94 aa18.89■□□□□ 0.61
GPC1-207ENST00000466624 GJA5P36382 358 aa18.89■□□□□ 0.61
GPC1-207ENST00000466624 RAB3GAP1Q15042 981 aa18.89■□□□□ 0.61
GPC1-207ENST00000466624 FAM47AQ5JRC9 791 aa18.89■□□□□ 0.61
GPC1-207ENST00000466624 RALYLQ86SE5 291 aaKnown RBP18.89■□□□□ 0.61
GPC1-207ENST00000466624 RASEFQ8IZ41 740 aa18.89■□□□□ 0.61
GPC1-207ENST00000466624 ZNF280CQ8ND82 737 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms