RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 ZNF316A6NFI3 1004 aaPredicted RBP14.53□□□□□ -0.08
CNOT4-208ENST00000465721 PEX10O60683 326 aa14.53□□□□□ -0.08
CNOT4-208ENST00000465721 CT47B1P0C2W7 299 aaPredicted RBP14.53□□□□□ -0.08
CNOT4-208ENST00000465721 SYN1P17600 705 aa14.53□□□□□ -0.08
CNOT4-208ENST00000465721 MCAMP43121 646 aa14.53□□□□□ -0.08
CNOT4-208ENST00000465721 IRX3P78415 501 aaPredicted RBP14.53□□□□□ -0.08
CNOT4-208ENST00000465721 JAG1P78504 1218 aa14.53□□□□□ -0.08
CNOT4-208ENST00000465721 SHROOM1Q2M3G4 852 aaPredicted RBP14.53□□□□□ -0.08
CNOT4-208ENST00000465721 Q7L0L9 218 aa14.53□□□□□ -0.08
CNOT4-208ENST00000465721 SH3RF3Q8TEJ3 882 aaPredicted RBP14.53□□□□□ -0.08
CNOT4-208ENST00000465721 AS3MTQ9HBK9 375 aa14.53□□□□□ -0.08
CNOT4-208ENST00000465721 TXNRD2Q9NNW7 524 aa14.53□□□□□ -0.08
CNOT4-208ENST00000465721 RAI14Q9P0K7 980 aa14.53□□□□□ -0.08
CNOT4-208ENST00000465721 MYH8P13535 1937 aa14.53□□□□□ -0.08
CNOT4-208ENST00000465721 NAV1Q8NEY1 1877 aa14.52□□□□□ -0.08
CNOT4-208ENST00000465721 PRKAR2AP13861 404 aaKnown RBP14.52□□□□□ -0.09
CNOT4-208ENST00000465721 HOXA7P31268 230 aaPredicted RBP14.52□□□□□ -0.09
CNOT4-208ENST00000465721 BACE1P56817 501 aa14.52□□□□□ -0.09
CNOT4-208ENST00000465721 HERVK_113P62684 666 aa14.52□□□□□ -0.09
CNOT4-208ENST00000465721 TDHQ8IZJ6 230 aa14.52□□□□□ -0.09
CNOT4-208ENST00000465721 DEFB123Q8N688 67 aa14.52□□□□□ -0.09
CNOT4-208ENST00000465721 SOCS4Q8WXH5 440 aa14.52□□□□□ -0.09
CNOT4-208ENST00000465721 NEUROD6Q96NK8 337 aa14.52□□□□□ -0.09
CNOT4-208ENST00000465721 ZNF236Q9UL36 1845 aa14.52□□□□□ -0.09
CNOT4-208ENST00000465721 PARP14Q460N5 1801 aa14.51□□□□□ -0.09
CNOT4-208ENST00000465721 ASNSP08243 561 aa14.51□□□□□ -0.09
CNOT4-208ENST00000465721 COL6A1P12109 1028 aa14.51□□□□□ -0.09
CNOT4-208ENST00000465721 XRCC5P13010 732 aaKnown RBP14.51□□□□□ -0.09
CNOT4-208ENST00000465721 CYP2B6P20813 491 aa14.51□□□□□ -0.09
CNOT4-208ENST00000465721 METTL16Q86W50 562 aaKnown RBP14.51□□□□□ -0.09
CNOT4-208ENST00000465721 USP6NLQ92738 828 aa14.51□□□□□ -0.09
CNOT4-208ENST00000465721 P2RX7Q99572 595 aaKnown RBP14.51□□□□□ -0.09
CNOT4-208ENST00000465721 NUDT12Q9BQG2 462 aa14.51□□□□□ -0.09
CNOT4-208ENST00000465721 PI4KBQ9UBF8 816 aa14.51□□□□□ -0.09
CNOT4-208ENST00000465721 A0A0G2JMZ2 1700 aa14.51□□□□□ -0.09
CNOT4-208ENST00000465721 FLT1P17948 1338 aa14.5□□□□□ -0.09
CNOT4-208ENST00000465721 GNAI3P08754 354 aa14.5□□□□□ -0.09
CNOT4-208ENST00000465721 POTEEQ6S8J3 1075 aa14.5□□□□□ -0.09
CNOT4-208ENST00000465721 ADGRA1Q86SQ6 560 aa14.5□□□□□ -0.09
CNOT4-208ENST00000465721 GPRC5AQ8NFJ5 357 aa14.5□□□□□ -0.09
CNOT4-208ENST00000465721 PORCNQ9H237 461 aa14.5□□□□□ -0.09
CNOT4-208ENST00000465721 DHX36Q9H2U1 1008 aaKnown RBP14.5□□□□□ -0.09
CNOT4-208ENST00000465721 TMOD4Q9NZQ9 345 aa14.5□□□□□ -0.09
CNOT4-208ENST00000465721 ZBTB21Q9ULJ3 1066 aa14.5□□□□□ -0.09
CNOT4-208ENST00000465721 GDF11O95390 407 aa14.49□□□□□ -0.09
CNOT4-208ENST00000465721 ZKSCAN1P17029 563 aaPredicted RBP14.49□□□□□ -0.09
CNOT4-208ENST00000465721 ERVK-9P63128 1117 aa14.49□□□□□ -0.09
CNOT4-208ENST00000465721 ERVK-24P63145 666 aa14.49□□□□□ -0.09
CNOT4-208ENST00000465721 CACNB2Q08289 660 aaPredicted RBP14.49□□□□□ -0.09
CNOT4-208ENST00000465721 CCL14Q16627 93 aa14.49□□□□□ -0.09
CNOT4-208ENST00000465721 GORABQ5T7V8 394 aa14.49□□□□□ -0.09
CNOT4-208ENST00000465721 LHX8Q68G74 356 aa14.49□□□□□ -0.09
CNOT4-208ENST00000465721 MAPKAPK5Q8IW41 473 aa14.49□□□□□ -0.09
CNOT4-208ENST00000465721 MTMR10Q9NXD2 777 aa14.49□□□□□ -0.09
CNOT4-208ENST00000465721 AATFQ9NY61 560 aaKnown RBP eCLIP14.49□□□□□ -0.09
CNOT4-208ENST00000465721 LRP2BPQ9P2M1 347 aa14.49□□□□□ -0.09
CNOT4-208ENST00000465721 RBPJLQ9UBG7 517 aa14.49□□□□□ -0.09
CNOT4-208ENST00000465721 STXBP5LQ9Y2K9 1186 aa14.49□□□□□ -0.09
CNOT4-208ENST00000465721 TTC28Q96AY4 2481 aa14.49□□□□□ -0.09
CNOT4-208ENST00000465721 ZNFX1Q9P2E3 1918 aaKnown RBP14.49□□□□□ -0.09
CNOT4-208ENST00000465721 PNMA6EA0A0J9YXQ4 647 aa14.48□□□□□ -0.09
CNOT4-208ENST00000465721 C19orf81C9J6K1 198 aa14.48□□□□□ -0.09
CNOT4-208ENST00000465721 USP17L10C9JJH3 530 aa14.48□□□□□ -0.09
CNOT4-208ENST00000465721 UQCRFS1P1P0C7P4 283 aa14.48□□□□□ -0.09
CNOT4-208ENST00000465721 CCND3P30281 292 aaPredicted RBP14.48□□□□□ -0.09
CNOT4-208ENST00000465721 MAPK4P31152 587 aa14.48□□□□□ -0.09
CNOT4-208ENST00000465721 RARSP54136 660 aaKnown RBP14.48□□□□□ -0.09
CNOT4-208ENST00000465721 PPP4CP60510 307 aa14.48□□□□□ -0.09
CNOT4-208ENST00000465721 POLA2Q14181 598 aa14.48□□□□□ -0.09
CNOT4-208ENST00000465721 PDE3AQ14432 1141 aa14.48□□□□□ -0.09
CNOT4-208ENST00000465721 LRRC26Q2I0M4 334 aa14.48□□□□□ -0.09
CNOT4-208ENST00000465721 MORN1Q5T089 497 aa14.48□□□□□ -0.09
CNOT4-208ENST00000465721 NAA16Q6N069 864 aaPredicted RBP14.48□□□□□ -0.09
CNOT4-208ENST00000465721 GPR142Q7Z601 462 aa14.48□□□□□ -0.09
CNOT4-208ENST00000465721 TRMT44Q8IYL2 757 aaKnown RBP14.48□□□□□ -0.09
CNOT4-208ENST00000465721 ARHGAP45Q92619 1136 aa14.48□□□□□ -0.09
CNOT4-208ENST00000465721 APBA2Q99767 749 aa14.48□□□□□ -0.09
CNOT4-208ENST00000465721 UBE2OQ9C0C9 1292 aaKnown RBP14.48□□□□□ -0.09
CNOT4-208ENST00000465721 PLCG2P16885 1265 aa14.47□□□□□ -0.09
CNOT4-208ENST00000465721 RGS2P41220 211 aa14.47□□□□□ -0.09
CNOT4-208ENST00000465721 Q3C1V9 767 aa14.47□□□□□ -0.09
CNOT4-208ENST00000465721 GTF3C2Q8WUA4 911 aaPredicted RBP14.47□□□□□ -0.09
CNOT4-208ENST00000465721 TGFBRAP1Q8WUH2 860 aa14.47□□□□□ -0.09
CNOT4-208ENST00000465721 NOL10Q9BSC4 688 aaKnown RBP14.47□□□□□ -0.09
CNOT4-208ENST00000465721 EMILIN3Q9NT22 766 aa14.47□□□□□ -0.09
CNOT4-208ENST00000465721 GINM1Q9NU53 330 aa14.47□□□□□ -0.09
CNOT4-208ENST00000465721 PALD1Q9ULE6 856 aa14.47□□□□□ -0.09
CNOT4-208ENST00000465721 COL11A1P12107 1806 aaPredicted RBP14.46□□□□□ -0.09
CNOT4-208ENST00000465721 BAG3O95817 575 aa14.46□□□□□ -0.09
CNOT4-208ENST00000465721 PLEKHH3Q7Z736 793 aa14.46□□□□□ -0.09
CNOT4-208ENST00000465721 PAGR1Q9BTK6 254 aa14.46□□□□□ -0.09
CNOT4-208ENST00000465721 SNRKQ9NRH2 765 aa14.46□□□□□ -0.09
CNOT4-208ENST00000465721 TNNQ9UQP3 1299 aa14.46□□□□□ -0.09
CNOT4-208ENST00000465721 PLXNA1Q9UIW2 1896 aa14.46□□□□□ -0.1
CNOT4-208ENST00000465721 SMCHD1A6NHR9 2005 aa14.46□□□□□ -0.1
CNOT4-208ENST00000465721 CNMDO75829 334 aa14.45□□□□□ -0.1
CNOT4-208ENST00000465721 GNAI2P04899 355 aa14.45□□□□□ -0.1
CNOT4-208ENST00000465721 CYP2E1P05181 493 aaPredicted RBP14.45□□□□□ -0.1
CNOT4-208ENST00000465721 TRIM27P14373 513 aa14.45□□□□□ -0.1
CNOT4-208ENST00000465721 FOXP4Q8IVH2 680 aaPredicted RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms