RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 TATDN1Q6P1N9 297 aa27.09■■□□□ 1.93
TRAF4-207ENST00000461195 SMC5Q8IY18 1101 aa27.09■■□□□ 1.93
TRAF4-207ENST00000461195 RNF113AO15541 343 aaKnown RBP27.08■■□□□ 1.93
TRAF4-207ENST00000461195 PRKAB2O43741 272 aa27.08■■□□□ 1.93
TRAF4-207ENST00000461195 JAG1P78504 1218 aa27.08■■□□□ 1.93
TRAF4-207ENST00000461195 CD99L2Q8TCZ2 262 aa27.08■■□□□ 1.93
TRAF4-207ENST00000461195 ZBTB21Q9ULJ3 1066 aa27.08■■□□□ 1.93
TRAF4-207ENST00000461195 BAZ2AQ9UIF9 1905 aaKnown RBP27.08■■□□□ 1.93
TRAF4-207ENST00000461195 IGHDP01880 384 aa27.07■■□□□ 1.92
TRAF4-207ENST00000461195 APPBP2Q92624 585 aa27.07■■□□□ 1.92
TRAF4-207ENST00000461195 DDRGK1Q96HY6 314 aa27.07■■□□□ 1.92
TRAF4-207ENST00000461195 PARK7Q99497 189 aaKnown RBP27.07■■□□□ 1.92
TRAF4-207ENST00000461195 WDR18Q9BV38 432 aa27.07■■□□□ 1.92
TRAF4-207ENST00000461195 STAP2Q9UGK3 403 aa27.07■■□□□ 1.92
TRAF4-207ENST00000461195 SLC45A1Q9Y2W3 748 aa27.07■■□□□ 1.92
TRAF4-207ENST00000461195 SLC4A4Q9Y6R1 1079 aa27.07■■□□□ 1.92
TRAF4-207ENST00000461195 PROCA1Q8NCQ7 364 aaPredicted RBP27.06■■□□□ 1.92
TRAF4-207ENST00000461195 TRIM17Q9Y577 477 aa27.06■■□□□ 1.92
TRAF4-207ENST00000461195 LOC285556D6RIA3 1793 aa27.06■■□□□ 1.92
TRAF4-207ENST00000461195 GABPAQ06546 454 aa27.05■■□□□ 1.92
TRAF4-207ENST00000461195 SHROOM1Q2M3G4 852 aaPredicted RBP27.05■■□□□ 1.92
TRAF4-207ENST00000461195 CERKLQ49MI3 558 aaPredicted RBP27.05■■□□□ 1.92
TRAF4-207ENST00000461195 B4GALNT3Q6L9W6 998 aa27.05■■□□□ 1.92
TRAF4-207ENST00000461195 FBXO46Q6PJ61 603 aaPredicted RBP27.05■■□□□ 1.92
TRAF4-207ENST00000461195 OTOP1Q7RTM1 612 aa27.05■■□□□ 1.92
TRAF4-207ENST00000461195 LNPKQ9C0E8 428 aa27.05■■□□□ 1.92
TRAF4-207ENST00000461195 AGTPBP1Q9UPW5 1226 aa27.05■■□□□ 1.92
TRAF4-207ENST00000461195 HPS5Q9UPZ3 1129 aa27.05■■□□□ 1.92
TRAF4-207ENST00000461195 GH2P01242 217 aa27.04■■□□□ 1.92
TRAF4-207ENST00000461195 SHMT1P34896 483 aa27.04■■□□□ 1.92
TRAF4-207ENST00000461195 PDE1AP54750 535 aa27.04■■□□□ 1.92
TRAF4-207ENST00000461195 C17orf99Q6UX52 265 aa27.04■■□□□ 1.92
TRAF4-207ENST00000461195 AMOTL1Q8IY63 956 aa27.04■■□□□ 1.92
TRAF4-207ENST00000461195 OSBP2Q969R2 916 aa27.04■■□□□ 1.92
TRAF4-207ENST00000461195 STRBPQ96SI9 672 aaKnown RBP27.04■■□□□ 1.92
TRAF4-207ENST00000461195 FSD1Q9BTV5 496 aa27.04■■□□□ 1.92
TRAF4-207ENST00000461195 EFCC1Q9HA90 598 aa27.04■■□□□ 1.92
TRAF4-207ENST00000461195 ADGRA2Q96PE1 1338 aa27.04■■□□□ 1.92
TRAF4-207ENST00000461195 CYP2D6P10635 497 aa27.03■■□□□ 1.92
TRAF4-207ENST00000461195 HMGCS2P54868 508 aa27.03■■□□□ 1.92
TRAF4-207ENST00000461195 IRX6P78412 446 aaPredicted RBP27.03■■□□□ 1.92
TRAF4-207ENST00000461195 ARHGEF6Q15052 776 aa27.03■■□□□ 1.92
TRAF4-207ENST00000461195 SH3D19Q5HYK7 790 aa27.03■■□□□ 1.92
TRAF4-207ENST00000461195 CPA4Q9UI42 421 aa27.03■■□□□ 1.92
TRAF4-207ENST00000461195 TAOK2Q9UL54 1235 aa27.03■■□□□ 1.92
TRAF4-207ENST00000461195 CYP2C8P10632 490 aa27.02■■□□□ 1.92
TRAF4-207ENST00000461195 BACE1P56817 501 aa27.02■■□□□ 1.92
TRAF4-207ENST00000461195 EVX2Q03828 476 aa27.02■■□□□ 1.92
TRAF4-207ENST00000461195 ABCB5Q2M3G0 1257 aa27.02■■□□□ 1.92
TRAF4-207ENST00000461195 MYH8P13535 1937 aa27.01■■□□□ 1.91
TRAF4-207ENST00000461195 MTMR2Q13614 643 aa27.01■■□□□ 1.91
TRAF4-207ENST00000461195 KIF22Q14807 665 aa27.01■■□□□ 1.91
TRAF4-207ENST00000461195 TREML2Q5T2D2 321 aa27.01■■□□□ 1.91
TRAF4-207ENST00000461195 CHD1LQ86WJ1 897 aa27.01■■□□□ 1.91
TRAF4-207ENST00000461195 CABP5Q9NP86 173 aa27.01■■□□□ 1.91
TRAF4-207ENST00000461195 SWAP70Q9UH65 585 aa27.01■■□□□ 1.91
TRAF4-207ENST00000461195 C19orf81C9J6K1 198 aa27■■□□□ 1.91
TRAF4-207ENST00000461195 USP17L10C9JJH3 530 aa27■■□□□ 1.91
TRAF4-207ENST00000461195 USP17L12C9JPN9 530 aa27■■□□□ 1.91
TRAF4-207ENST00000461195 USP17L21D6R901 530 aa27■■□□□ 1.91
TRAF4-207ENST00000461195 LACTBP83111 547 aaPredicted RBP27■■□□□ 1.91
TRAF4-207ENST00000461195 CAP1Q01518 475 aa27■■□□□ 1.91
TRAF4-207ENST00000461195 NUCB1Q02818 461 aa27■■□□□ 1.91
TRAF4-207ENST00000461195 PABPC4Q13310 644 aaKnown RBP eCLIP27■■□□□ 1.91
TRAF4-207ENST00000461195 C12orf60Q5U649 245 aa27■■□□□ 1.91
TRAF4-207ENST00000461195 TMOD4Q9NZQ9 345 aa27■■□□□ 1.91
TRAF4-207ENST00000461195 PNMA3Q9UL41 463 aa27■■□□□ 1.91
TRAF4-207ENST00000461195 GPAA1O43292 621 aa26.99■■□□□ 1.91
TRAF4-207ENST00000461195 RAB3GAP1Q15042 981 aa26.99■■□□□ 1.91
TRAF4-207ENST00000461195 EVI5LQ96CN4 794 aa26.99■■□□□ 1.91
TRAF4-207ENST00000461195 M0R2C6 588 aa26.98■■□□□ 1.91
TRAF4-207ENST00000461195 GNAT2P19087 354 aa26.98■■□□□ 1.91
TRAF4-207ENST00000461195 GIMAP6Q6P9H5 292 aa26.98■■□□□ 1.91
TRAF4-207ENST00000461195 CTR9Q6PD62 1173 aa26.98■■□□□ 1.91
TRAF4-207ENST00000461195 SMCR8Q8TEV9 937 aaPredicted RBP26.98■■□□□ 1.91
TRAF4-207ENST00000461195 DYNLL2Q96FJ2 89 aa26.98■■□□□ 1.91
TRAF4-207ENST00000461195 ARPP21Q9UBL0 812 aaPredicted RBP26.98■■□□□ 1.91
TRAF4-207ENST00000461195 CYP2D7A0A087X1C5 515 aa26.97■■□□□ 1.91
TRAF4-207ENST00000461195 GSG1L2A8MUP6 293 aa26.97■■□□□ 1.91
TRAF4-207ENST00000461195 BCRP11274 1271 aa26.97■■□□□ 1.91
TRAF4-207ENST00000461195 SLC44A5Q8NCS7 719 aa26.97■■□□□ 1.91
TRAF4-207ENST00000461195 PTPN22Q9Y2R2 807 aa26.97■■□□□ 1.91
TRAF4-207ENST00000461195 ZSWIM8A7E2V4 1837 aa26.97■■□□□ 1.91
TRAF4-207ENST00000461195 OSBPP22059 807 aa26.96■■□□□ 1.91
TRAF4-207ENST00000461195 ZMYM1Q5SVZ6 1142 aa26.96■■□□□ 1.91
TRAF4-207ENST00000461195 ARHGAP39Q9C0H5 1083 aa26.96■■□□□ 1.91
TRAF4-207ENST00000461195 MPHOSPH10O00566 681 aaKnown RBP26.95■■□□□ 1.9
TRAF4-207ENST00000461195 SBK1Q52WX2 424 aa26.95■■□□□ 1.9
TRAF4-207ENST00000461195 USP17L2Q6R6M4 530 aa26.95■■□□□ 1.9
TRAF4-207ENST00000461195 C16orf86Q6ZW13 317 aa26.95■■□□□ 1.9
TRAF4-207ENST00000461195 SEC62Q99442 399 aaKnown RBP26.95■■□□□ 1.9
TRAF4-207ENST00000461195 FEZ1Q99689 392 aa26.95■■□□□ 1.9
TRAF4-207ENST00000461195 GNRH1P01148 92 aa26.94■■□□□ 1.9
TRAF4-207ENST00000461195 GUCY1A2P33402 732 aa26.94■■□□□ 1.9
TRAF4-207ENST00000461195 CDK8P49336 464 aa26.94■■□□□ 1.9
TRAF4-207ENST00000461195 SEPT2Q15019 361 aa26.94■■□□□ 1.9
TRAF4-207ENST00000461195 PATL2C9JE40 543 aaKnown RBP26.93■■□□□ 1.9
TRAF4-207ENST00000461195 SMIM22K7EJ46 135 aa26.93■■□□□ 1.9
TRAF4-207ENST00000461195 APPP05067 770 aa26.93■■□□□ 1.9
TRAF4-207ENST00000461195 PSMC4P43686 418 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms