RNA–Protein interactions for RNA: ENST00000460428.5

SFPQ-202, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-202ENST00000460428 ALG1Q9BT22 464 aa9.37□□□□□ -0.91
SFPQ-202ENST00000460428 GDPD2Q9HCC8 539 aa9.37□□□□□ -0.91
SFPQ-202ENST00000460428 IL17RBQ9NRM6 502 aa9.37□□□□□ -0.91
SFPQ-202ENST00000460428 RTEL1Q9NZ71 1219 aa9.37□□□□□ -0.91
SFPQ-202ENST00000460428 MORC2Q9Y6X9 1032 aaPredicted RBP9.37□□□□□ -0.91
SFPQ-202ENST00000460428 PLIN4Q96Q06 1357 aa9.37□□□□□ -0.91
SFPQ-202ENST00000460428 USP17L3A6NCW0 530 aa9.36□□□□□ -0.91
SFPQ-202ENST00000460428 USP17L4A6NCW7 530 aa9.36□□□□□ -0.91
SFPQ-202ENST00000460428 FIBPO43427 364 aa9.36□□□□□ -0.91
SFPQ-202ENST00000460428 ECE2O60344 883 aa9.36□□□□□ -0.91
SFPQ-202ENST00000460428 PRDM1O75626 825 aa9.36□□□□□ -0.91
SFPQ-202ENST00000460428 POLR3DP05423 398 aaPredicted RBP9.36□□□□□ -0.91
SFPQ-202ENST00000460428 RASA1P20936 1047 aa9.36□□□□□ -0.91
SFPQ-202ENST00000460428 SMARCA1P28370 1054 aa9.36□□□□□ -0.91
SFPQ-202ENST00000460428 NASPP49321 788 aaPredicted RBP9.36□□□□□ -0.91
SFPQ-202ENST00000460428 CDK8P49336 464 aa9.36□□□□□ -0.91
SFPQ-202ENST00000460428 TFAP4Q01664 338 aa9.36□□□□□ -0.91
SFPQ-202ENST00000460428 CCDC93Q567U6 631 aa9.36□□□□□ -0.91
SFPQ-202ENST00000460428 KRT40Q6A162 431 aa9.36□□□□□ -0.91
SFPQ-202ENST00000460428 CAVIN1Q6NZI2 390 aaKnown RBP9.36□□□□□ -0.91
SFPQ-202ENST00000460428 FAM173BQ6P4H8 233 aa9.36□□□□□ -0.91
SFPQ-202ENST00000460428 USP17L1Q7RTZ2 530 aa9.36□□□□□ -0.91
SFPQ-202ENST00000460428 GAS2L3Q86XJ1 694 aa9.36□□□□□ -0.91
SFPQ-202ENST00000460428 MAPKAPK5Q8IW41 473 aa9.36□□□□□ -0.91
SFPQ-202ENST00000460428 TRIM22Q8IYM9 498 aa9.36□□□□□ -0.91
SFPQ-202ENST00000460428 ZNF444Q8N0Y2 327 aaPredicted RBP9.36□□□□□ -0.91
SFPQ-202ENST00000460428 FAM177A1Q8N128 213 aaPredicted RBP9.36□□□□□ -0.91
SFPQ-202ENST00000460428 SPATA32Q96LK8 384 aa9.36□□□□□ -0.91
SFPQ-202ENST00000460428 IDI2Q9BXS1 227 aa9.36□□□□□ -0.91
SFPQ-202ENST00000460428 GZF1Q9H116 711 aaPredicted RBP9.36□□□□□ -0.91
SFPQ-202ENST00000460428 EHD4Q9H223 541 aa9.36□□□□□ -0.91
SFPQ-202ENST00000460428 POLR3EQ9NVU0 708 aa9.36□□□□□ -0.91
SFPQ-202ENST00000460428 SWAP70Q9UH65 585 aa9.36□□□□□ -0.91
SFPQ-202ENST00000460428 SERPINA10Q9UK55 444 aa9.36□□□□□ -0.91
SFPQ-202ENST00000460428 SCN9AQ15858 1988 aa9.35□□□□□ -0.91
SFPQ-202ENST00000460428 COL2A1P02458 1487 aaPredicted RBP9.35□□□□□ -0.91
SFPQ-202ENST00000460428 MYH1P12882 1939 aa9.35□□□□□ -0.91
SFPQ-202ENST00000460428 TSPY2A6NKD2 308 aa9.35□□□□□ -0.91
SFPQ-202ENST00000460428 G3V3G9 751 aa9.35□□□□□ -0.91
SFPQ-202ENST00000460428 YEATS4O95619 227 aa9.35□□□□□ -0.91
SFPQ-202ENST00000460428 DPEP1P16444 411 aa9.35□□□□□ -0.91
SFPQ-202ENST00000460428 RXRAP19793 462 aa9.35□□□□□ -0.91
SFPQ-202ENST00000460428 CRKP46108 304 aa9.35□□□□□ -0.91
SFPQ-202ENST00000460428 MMP14P50281 582 aa9.35□□□□□ -0.91
SFPQ-202ENST00000460428 PKN1Q16512 942 aa9.35□□□□□ -0.91
SFPQ-202ENST00000460428 FOXD4L6Q3SYB3 417 aaPredicted RBP9.35□□□□□ -0.91
SFPQ-202ENST00000460428 CCDC183Q5T5S1 534 aa9.35□□□□□ -0.91
SFPQ-202ENST00000460428 DCAF8Q5TAQ9 597 aa9.35□□□□□ -0.91
SFPQ-202ENST00000460428 MYSM1Q5VVJ2 828 aa9.35□□□□□ -0.91
SFPQ-202ENST00000460428 CDC42EP5Q6NZY7 148 aa9.35□□□□□ -0.91
SFPQ-202ENST00000460428 LRSAM1Q6UWE0 723 aa9.35□□□□□ -0.91
SFPQ-202ENST00000460428 FOXD4L3Q6VB84 417 aaPredicted RBP9.35□□□□□ -0.91
SFPQ-202ENST00000460428 TMTC3Q6ZXV5 915 aa9.35□□□□□ -0.91
SFPQ-202ENST00000460428 METTL16Q86W50 562 aaKnown RBP9.35□□□□□ -0.91
SFPQ-202ENST00000460428 RAB11FIP4Q86YS3 637 aa9.35□□□□□ -0.91
SFPQ-202ENST00000460428 PHKBQ93100 1093 aa9.35□□□□□ -0.91
SFPQ-202ENST00000460428 DYNLL2Q96FJ2 89 aa9.35□□□□□ -0.91
SFPQ-202ENST00000460428 PGBD1Q96JS3 809 aa9.35□□□□□ -0.91
SFPQ-202ENST00000460428 USP28Q96RU2 1077 aa9.35□□□□□ -0.91
SFPQ-202ENST00000460428 MYL10Q9BUA6 226 aa9.35□□□□□ -0.91
SFPQ-202ENST00000460428 MTFR1LQ9H019 292 aa9.35□□□□□ -0.91
SFPQ-202ENST00000460428 DBNDD1Q9H9R9 158 aa9.35□□□□□ -0.91
SFPQ-202ENST00000460428 MKNK2Q9HBH9 465 aa9.35□□□□□ -0.91
SFPQ-202ENST00000460428 RBM27Q9P2N5 1060 aaKnown RBP9.35□□□□□ -0.91
SFPQ-202ENST00000460428 ECM29Q5VYK3 1845 aa9.35□□□□□ -0.91
SFPQ-202ENST00000460428 IGKV6D-41A0A0C4DH26 115 aa9.34□□□□□ -0.91
SFPQ-202ENST00000460428 YDJCA8MPS7 323 aa9.34□□□□□ -0.91
SFPQ-202ENST00000460428 KIF28PB7ZC32 967 aa9.34□□□□□ -0.91
SFPQ-202ENST00000460428 MMP1P03956 469 aa9.34□□□□□ -0.91
SFPQ-202ENST00000460428 XRCC6P12956 609 aaKnown RBP eCLIP9.34□□□□□ -0.91
SFPQ-202ENST00000460428 KIF5BP33176 963 aa9.34□□□□□ -0.91
SFPQ-202ENST00000460428 GNAQP50148 359 aa9.34□□□□□ -0.91
SFPQ-202ENST00000460428 GRM4Q14833 912 aa9.34□□□□□ -0.91
SFPQ-202ENST00000460428 FAM47AQ5JRC9 791 aa9.34□□□□□ -0.91
SFPQ-202ENST00000460428 RBM43Q6ZSC3 357 aaKnown RBP9.34□□□□□ -0.91
SFPQ-202ENST00000460428 LINC00301Q8NCQ3 95 aa9.34□□□□□ -0.91
SFPQ-202ENST00000460428 GMLQ99445 158 aa9.34□□□□□ -0.91
SFPQ-202ENST00000460428 SGIP1Q9BQI5 828 aa9.34□□□□□ -0.91
SFPQ-202ENST00000460428 LZTS2Q9BRK4 669 aa9.34□□□□□ -0.91
SFPQ-202ENST00000460428 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.34□□□□□ -0.91
SFPQ-202ENST00000460428 SLC26A6Q9BXS9 759 aa9.34□□□□□ -0.91
SFPQ-202ENST00000460428 OSBPL5Q9H0X9 879 aaPredicted RBP9.34□□□□□ -0.91
SFPQ-202ENST00000460428 DHX36Q9H2U1 1008 aaKnown RBP9.34□□□□□ -0.91
SFPQ-202ENST00000460428 FOXP1Q9H334 677 aaPredicted RBP9.34□□□□□ -0.91
SFPQ-202ENST00000460428 GRPEL1Q9HAV7 217 aa9.34□□□□□ -0.91
SFPQ-202ENST00000460428 KCNQ5Q9NR82 932 aa9.34□□□□□ -0.91
SFPQ-202ENST00000460428 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.34□□□□□ -0.91
SFPQ-202ENST00000460428 USP40Q9NVE5 1235 aa9.34□□□□□ -0.91
SFPQ-202ENST00000460428 TFIP11Q9UBB9 837 aaKnown RBP9.34□□□□□ -0.91
SFPQ-202ENST00000460428 CNTNAP5Q8WYK1 1306 aa9.33□□□□□ -0.92
SFPQ-202ENST00000460428 GREB1LQ9C091 1923 aaPredicted RBP9.33□□□□□ -0.92
SFPQ-202ENST00000460428 A0A1W2PQ27 194 aa9.33□□□□□ -0.92
SFPQ-202ENST00000460428 A0A1W2PQ64 194 aa9.33□□□□□ -0.92
SFPQ-202ENST00000460428 A0A1W2PQD8 194 aa9.33□□□□□ -0.92
SFPQ-202ENST00000460428 PALM3A6NDB9 673 aaPredicted RBP9.33□□□□□ -0.92
SFPQ-202ENST00000460428 C21orf2O43822 256 aa9.33□□□□□ -0.92
SFPQ-202ENST00000460428 PPP6R2O75170 966 aa9.33□□□□□ -0.92
SFPQ-202ENST00000460428 VIL1P09327 827 aaKnown RBP9.33□□□□□ -0.92
SFPQ-202ENST00000460428 TSPY3P0CV98 308 aa9.33□□□□□ -0.92
SFPQ-202ENST00000460428 TSPY8P0CW00 308 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms