RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 TOMM70O94826 608 aa5.3□□□□□ -1.56
RBM39-220ENST00000455343 WISP1O95388 367 aa5.3□□□□□ -1.56
RBM39-220ENST00000455343 TXNDC11Q6PKC3 985 aa5.3□□□□□ -1.56
RBM39-220ENST00000455343 NBPF11Q86T75 865 aa5.3□□□□□ -1.56
RBM39-220ENST00000455343 CEP120Q8N960 986 aa5.3□□□□□ -1.56
RBM39-220ENST00000455343 ANKRD24Q8TF21 1146 aa5.3□□□□□ -1.56
RBM39-220ENST00000455343 ZNF526Q8TF50 670 aaPredicted RBP5.3□□□□□ -1.56
RBM39-220ENST00000455343 PBX4Q9BYU1 374 aa5.3□□□□□ -1.56
RBM39-220ENST00000455343 ELP3Q9H9T3 547 aa5.3□□□□□ -1.56
RBM39-220ENST00000455343 TMEM63CQ9P1W3 806 aa5.3□□□□□ -1.56
RBM39-220ENST00000455343 CCNL1Q9UK58 526 aaPredicted RBP5.3□□□□□ -1.56
RBM39-220ENST00000455343 RNF112Q9ULX5 631 aa5.3□□□□□ -1.56
RBM39-220ENST00000455343 PIK3C2AO00443 1686 aa5.3□□□□□ -1.56
RBM39-220ENST00000455343 EVC2Q86UK5 1308 aa5.29□□□□□ -1.56
RBM39-220ENST00000455343 TM4SF5O14894 197 aa5.29□□□□□ -1.56
RBM39-220ENST00000455343 GLB1P16278 677 aa5.29□□□□□ -1.56
RBM39-220ENST00000455343 FSTP19883 344 aa5.29□□□□□ -1.56
RBM39-220ENST00000455343 CD68P34810 354 aaPredicted RBP5.29□□□□□ -1.56
RBM39-220ENST00000455343 PRELPP51888 382 aa5.29□□□□□ -1.56
RBM39-220ENST00000455343 ZNF438Q7Z4V0 828 aa5.29□□□□□ -1.56
RBM39-220ENST00000455343 NCAPG2Q86XI2 1143 aa5.29□□□□□ -1.56
RBM39-220ENST00000455343 FLAD1Q8NFF5 587 aa5.29□□□□□ -1.56
RBM39-220ENST00000455343 DDX54Q8TDD1 881 aaKnown RBP5.29□□□□□ -1.56
RBM39-220ENST00000455343 KANSL3Q9P2N6 904 aa5.29□□□□□ -1.56
RBM39-220ENST00000455343 SBNO2Q9Y2G9 1366 aa5.29□□□□□ -1.56
RBM39-220ENST00000455343 IGSF1Q8N6C5 1336 aa5.28□□□□□ -1.56
RBM39-220ENST00000455343 WNK3Q9BYP7 1800 aa5.28□□□□□ -1.56
RBM39-220ENST00000455343 RPLP1P05386 114 aaKnown RBP5.28□□□□□ -1.56
RBM39-220ENST00000455343 PTPRAP18433 802 aa5.28□□□□□ -1.56
RBM39-220ENST00000455343 EPHA1P21709 976 aa5.28□□□□□ -1.56
RBM39-220ENST00000455343 HMGB2P26583 209 aaKnown RBP5.28□□□□□ -1.56
RBM39-220ENST00000455343 XKR5Q6UX68 686 aa5.28□□□□□ -1.56
RBM39-220ENST00000455343 ACAD11Q709F0 780 aa5.28□□□□□ -1.56
RBM39-220ENST00000455343 AMIGO3Q86WK7 504 aa5.28□□□□□ -1.56
RBM39-220ENST00000455343 IP6K1Q92551 441 aa5.28□□□□□ -1.56
RBM39-220ENST00000455343 EDEM1Q92611 657 aa5.28□□□□□ -1.56
RBM39-220ENST00000455343 SYTL4Q96C24 671 aaPredicted RBP5.28□□□□□ -1.56
RBM39-220ENST00000455343 UBL7Q96S82 380 aaPredicted RBP5.28□□□□□ -1.56
RBM39-220ENST00000455343 KCNK4Q9NYG8 393 aa5.28□□□□□ -1.56
RBM39-220ENST00000455343 CNTN3Q9P232 1028 aa5.28□□□□□ -1.56
RBM39-220ENST00000455343 KTN1Q86UP2 1357 aaKnown RBP5.28□□□□□ -1.56
RBM39-220ENST00000455343 AKAP12Q02952 1782 aa5.27□□□□□ -1.57
RBM39-220ENST00000455343 FSCN2O14926 492 aa5.27□□□□□ -1.57
RBM39-220ENST00000455343 PDGFAP04085 211 aa5.27□□□□□ -1.57
RBM39-220ENST00000455343 MPSTP25325 297 aa5.27□□□□□ -1.57
RBM39-220ENST00000455343 CDC25BP30305 580 aa5.27□□□□□ -1.57
RBM39-220ENST00000455343 QSER1Q2KHR3 1735 aa5.27□□□□□ -1.57
RBM39-220ENST00000455343 FAM117BQ6P1L5 589 aa5.27□□□□□ -1.57
RBM39-220ENST00000455343 SLC51AQ86UW1 340 aa5.27□□□□□ -1.57
RBM39-220ENST00000455343 NME9Q86XW9 330 aa5.27□□□□□ -1.57
RBM39-220ENST00000455343 C1orf127Q8N9H9 656 aa5.27□□□□□ -1.57
RBM39-220ENST00000455343 KLHL23Q8NBE8 558 aa5.27□□□□□ -1.57
RBM39-220ENST00000455343 ZCRB1Q8TBF4 217 aaKnown RBP5.27□□□□□ -1.57
RBM39-220ENST00000455343 POP1Q99575 1024 aaKnown RBP5.27□□□□□ -1.57
RBM39-220ENST00000455343 ADAM19Q9H013 955 aa5.27□□□□□ -1.57
RBM39-220ENST00000455343 SH2B1Q9NRF2 756 aaPredicted RBP5.27□□□□□ -1.57
RBM39-220ENST00000455343 SALL4Q9UJQ4 1053 aa5.27□□□□□ -1.57
RBM39-220ENST00000455343 RAXQ9Y2V3 346 aa5.27□□□□□ -1.57
RBM39-220ENST00000455343 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.27□□□□□ -1.57
RBM39-220ENST00000455343 USP47Q96K76 1375 aa5.27□□□□□ -1.57
RBM39-220ENST00000455343 CD163L1Q9NR16 1453 aa5.26□□□□□ -1.57
RBM39-220ENST00000455343 KIAA1210Q9ULL0 1709 aa5.26□□□□□ -1.57
RBM39-220ENST00000455343 BTAF1O14981 1849 aa5.26□□□□□ -1.57
RBM39-220ENST00000455343 TMEM88BA6NKF7 163 aa5.26□□□□□ -1.57
RBM39-220ENST00000455343 ADAM11O75078 769 aa5.26□□□□□ -1.57
RBM39-220ENST00000455343 ACPPP15309 386 aa5.26□□□□□ -1.57
RBM39-220ENST00000455343 PCSK2P16519 638 aa5.26□□□□□ -1.57
RBM39-220ENST00000455343 MZF1P28698 734 aaPredicted RBP5.26□□□□□ -1.57
RBM39-220ENST00000455343 EIF1AXP47813 144 aaKnown RBP5.26□□□□□ -1.57
RBM39-220ENST00000455343 DNM1Q05193 864 aaKnown RBP5.26□□□□□ -1.57
RBM39-220ENST00000455343 NOM1Q5C9Z4 860 aaKnown RBP5.26□□□□□ -1.57
RBM39-220ENST00000455343 KIAA1211Q6ZU35 1233 aa5.26□□□□□ -1.57
RBM39-220ENST00000455343 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.26□□□□□ -1.57
RBM39-220ENST00000455343 ARMC10Q8N2F6 343 aa5.26□□□□□ -1.57
RBM39-220ENST00000455343 FOXD4L4Q8WXT5 416 aaPredicted RBP5.26□□□□□ -1.57
RBM39-220ENST00000455343 CEP41Q9BYV8 373 aa5.26□□□□□ -1.57
RBM39-220ENST00000455343 CHRDQ9H2X0 955 aa5.26□□□□□ -1.57
RBM39-220ENST00000455343 GGNBP2Q9H3C7 697 aa5.26□□□□□ -1.57
RBM39-220ENST00000455343 NMRK2Q9NPI5 230 aa5.26□□□□□ -1.57
RBM39-220ENST00000455343 SEC31BQ9NQW1 1179 aa5.26□□□□□ -1.57
RBM39-220ENST00000455343 CGNL1Q0VF96 1302 aa5.25□□□□□ -1.57
RBM39-220ENST00000455343 A6NHS1 94 aa5.25□□□□□ -1.57
RBM39-220ENST00000455343 FAM177BA6PVY3 158 aa5.25□□□□□ -1.57
RBM39-220ENST00000455343 H3BRJ5 948 aa5.25□□□□□ -1.57
RBM39-220ENST00000455343 NFKBIEO00221 500 aa5.25□□□□□ -1.57
RBM39-220ENST00000455343 DDX3YO15523 660 aaKnown RBP5.25□□□□□ -1.57
RBM39-220ENST00000455343 CES1P23141 567 aa5.25□□□□□ -1.57
RBM39-220ENST00000455343 SSFA2P28290 1259 aa5.25□□□□□ -1.57
RBM39-220ENST00000455343 TGFB2P61812 414 aa5.25□□□□□ -1.57
RBM39-220ENST00000455343 HTRA3P83110 453 aa5.25□□□□□ -1.57
RBM39-220ENST00000455343 FSTL1Q12841 308 aa5.25□□□□□ -1.57
RBM39-220ENST00000455343 UVSSAQ2YD98 709 aa5.25□□□□□ -1.57
RBM39-220ENST00000455343 CCDC82Q8N4S0 544 aa5.25□□□□□ -1.57
RBM39-220ENST00000455343 UBASH3BQ8TF42 649 aa5.25□□□□□ -1.57
RBM39-220ENST00000455343 GTF3C2Q8WUA4 911 aaPredicted RBP5.25□□□□□ -1.57
RBM39-220ENST00000455343 WNT8BQ93098 351 aa5.25□□□□□ -1.57
RBM39-220ENST00000455343 FAM46AQ96IP4 442 aaKnown RBP5.25□□□□□ -1.57
RBM39-220ENST00000455343 DZANK1Q9NVP4 752 aa5.25□□□□□ -1.57
RBM39-220ENST00000455343 WWC3Q9ULE0 1092 aa5.25□□□□□ -1.57
RBM39-220ENST00000455343 CICQ96RK0 1608 aaPredicted RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms