RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 FAM161BQ96MY7 647 aa21.3■■□□□ 1
UBE2D4-209ENST00000454428 AS3MTQ9HBK9 375 aa21.3■■□□□ 1
UBE2D4-209ENST00000454428 HERC5Q9UII4 1024 aaKnown RBP21.3■■□□□ 1
UBE2D4-209ENST00000454428 GPR142Q7Z601 462 aa21.29■■□□□ 1
UBE2D4-209ENST00000454428 TRMT44Q8IYL2 757 aaKnown RBP21.29■■□□□ 1
UBE2D4-209ENST00000454428 MAPK4P31152 587 aa21.28■■□□□ 1
UBE2D4-209ENST00000454428 ERVK-9P63128 1117 aa21.28■■□□□ 1
UBE2D4-209ENST00000454428 ERVK-24P63145 666 aa21.28■■□□□ 1
UBE2D4-209ENST00000454428 TFCP2Q12800 502 aa21.28■■□□□ 1
UBE2D4-209ENST00000454428 FAM9BQ8IZU0 186 aa21.28■■□□□ 1
UBE2D4-209ENST00000454428 SH3RF3Q8TEJ3 882 aaPredicted RBP21.28■■□□□ 1
UBE2D4-209ENST00000454428 FOCADQ5VW36 1801 aa21.27■■□□□ 1
UBE2D4-209ENST00000454428 METTL16Q86W50 562 aaKnown RBP21.27■■□□□ 1
UBE2D4-209ENST00000454428 TEX11Q8IYF3 940 aa21.27■■□□□ 1
UBE2D4-209ENST00000454428 TMOD4Q9NZQ9 345 aa21.27■■□□□ 1
UBE2D4-209ENST00000454428 FLRT1Q9NZU1 646 aa21.27■■□□□ 1
UBE2D4-209ENST00000454428 RGS2P41220 211 aa21.26■□□□□ 0.99
UBE2D4-209ENST00000454428 GSTO1P78417 241 aa21.26■□□□□ 0.99
UBE2D4-209ENST00000454428 PDE3AQ14432 1141 aa21.26■□□□□ 0.99
UBE2D4-209ENST00000454428 MVPQ14764 893 aaKnown RBP21.26■□□□□ 0.99
UBE2D4-209ENST00000454428 SPATA5Q8NB90 893 aa21.26■□□□□ 0.99
UBE2D4-209ENST00000454428 APBA2Q99767 749 aa21.26■□□□□ 0.99
UBE2D4-209ENST00000454428 EMILIN3Q9NT22 766 aa21.26■□□□□ 0.99
UBE2D4-209ENST00000454428 PI4KBQ9UBF8 816 aa21.26■□□□□ 0.99
UBE2D4-209ENST00000454428 C19orf81C9J6K1 198 aa21.25■□□□□ 0.99
UBE2D4-209ENST00000454428 CNMDO75829 334 aa21.25■□□□□ 0.99
UBE2D4-209ENST00000454428 LDHCP07864 332 aa21.25■□□□□ 0.99
UBE2D4-209ENST00000454428 ASNSP08243 561 aa21.25■□□□□ 0.99
UBE2D4-209ENST00000454428 ALDH1L2Q3SY69 923 aa21.25■□□□□ 0.99
UBE2D4-209ENST00000454428 PLEKHH3Q7Z736 793 aa21.25■□□□□ 0.99
UBE2D4-209ENST00000454428 MEIS3Q99687 375 aa21.25■□□□□ 0.99
UBE2D4-209ENST00000454428 TTC28Q96AY4 2481 aa21.24■□□□□ 0.99
UBE2D4-209ENST00000454428 ARID4AP29374 1257 aaPredicted RBP21.24■□□□□ 0.99
UBE2D4-209ENST00000454428 PAGR1Q9BTK6 254 aa21.24■□□□□ 0.99
UBE2D4-209ENST00000454428 SENP6Q9GZR1 1112 aaPredicted RBP21.24■□□□□ 0.99
UBE2D4-209ENST00000454428 RAI14Q9P0K7 980 aa21.24■□□□□ 0.99
UBE2D4-209ENST00000454428 RLFQ13129 1914 aa21.23■□□□□ 0.99
UBE2D4-209ENST00000454428 USP17L10C9JJH3 530 aa21.23■□□□□ 0.99
UBE2D4-209ENST00000454428 GDF11O95390 407 aa21.23■□□□□ 0.99
UBE2D4-209ENST00000454428 MCAMP43121 646 aa21.23■□□□□ 0.99
UBE2D4-209ENST00000454428 MAP2K5Q13163 448 aa21.23■□□□□ 0.99
UBE2D4-209ENST00000454428 CDX2Q99626 313 aaPredicted RBP21.23■□□□□ 0.99
UBE2D4-209ENST00000454428 DHX36Q9H2U1 1008 aaKnown RBP21.23■□□□□ 0.99
UBE2D4-209ENST00000454428 AKAP2Q9Y2D5 859 aa21.23■□□□□ 0.99
UBE2D4-209ENST00000454428 E9PSI1 815 aa21.22■□□□□ 0.99
UBE2D4-209ENST00000454428 IGHA2P01877 340 aa21.22■□□□□ 0.99
UBE2D4-209ENST00000454428 LBHD1Q9BQE6 289 aaPredicted RBP21.22■□□□□ 0.99
UBE2D4-209ENST00000454428 SMC4Q9NTJ3 1288 aa21.22■□□□□ 0.99
UBE2D4-209ENST00000454428 ZBTB21Q9ULJ3 1066 aa21.22■□□□□ 0.99
UBE2D4-209ENST00000454428 ATN1P54259 1190 aaPredicted RBP21.21■□□□□ 0.99
UBE2D4-209ENST00000454428 SLFN5Q08AF3 891 aa21.21■□□□□ 0.99
UBE2D4-209ENST00000454428 ZNF697Q5TEC3 545 aa21.21■□□□□ 0.99
UBE2D4-209ENST00000454428 ADGRA1Q86SQ6 560 aa21.21■□□□□ 0.99
UBE2D4-209ENST00000454428 TRPV1Q8NER1 839 aa21.21■□□□□ 0.99
UBE2D4-209ENST00000454428 TGFBRAP1Q8WUH2 860 aa21.21■□□□□ 0.99
UBE2D4-209ENST00000454428 NEUROD6Q96NK8 337 aa21.21■□□□□ 0.99
UBE2D4-209ENST00000454428 AATFQ9NY61 560 aaKnown RBP eCLIP21.21■□□□□ 0.99
UBE2D4-209ENST00000454428 DDX20Q9UHI6 824 aaKnown RBP21.21■□□□□ 0.99
UBE2D4-209ENST00000454428 NOB1Q9ULX3 412 aaKnown RBP21.21■□□□□ 0.99
UBE2D4-209ENST00000454428 NDUFB9Q9Y6M9 179 aa21.21■□□□□ 0.99
UBE2D4-209ENST00000454428 MYO5AQ9Y4I1 1855 aaKnown RBP21.21■□□□□ 0.99
UBE2D4-209ENST00000454428 FLT1P17948 1338 aa21.21■□□□□ 0.99
UBE2D4-209ENST00000454428 ANP32CO43423 234 aa21.2■□□□□ 0.98
UBE2D4-209ENST00000454428 SHHQ15465 462 aa21.2■□□□□ 0.98
UBE2D4-209ENST00000454428 C9orf50Q5SZB4 431 aa21.2■□□□□ 0.98
UBE2D4-209ENST00000454428 MAPKAPK5Q8IW41 473 aa21.2■□□□□ 0.98
UBE2D4-209ENST00000454428 GTF3C2Q8WUA4 911 aaPredicted RBP21.2■□□□□ 0.98
UBE2D4-209ENST00000454428 LPAR1Q92633 364 aa21.2■□□□□ 0.98
UBE2D4-209ENST00000454428 EDC3Q96F86 508 aaKnown RBP21.2■□□□□ 0.98
UBE2D4-209ENST00000454428 PALD1Q9ULE6 856 aa21.2■□□□□ 0.98
UBE2D4-209ENST00000454428 SRGAP3O43295 1099 aa21.19■□□□□ 0.98
UBE2D4-209ENST00000454428 RTP1P59025 263 aa21.19■□□□□ 0.98
UBE2D4-209ENST00000454428 MTX1Q13505 466 aa21.19■□□□□ 0.98
UBE2D4-209ENST00000454428 FOXP4Q8IVH2 680 aaPredicted RBP21.19■□□□□ 0.98
UBE2D4-209ENST00000454428 MAFAQ8NHW3 353 aaPredicted RBP21.19■□□□□ 0.98
UBE2D4-209ENST00000454428 SEMA6BQ9H3T3 888 aa21.19■□□□□ 0.98
UBE2D4-209ENST00000454428 GINM1Q9NU53 330 aa21.19■□□□□ 0.98
UBE2D4-209ENST00000454428 DNM1LO00429 736 aa21.18■□□□□ 0.98
UBE2D4-209ENST00000454428 PTPREP23469 700 aa21.18■□□□□ 0.98
UBE2D4-209ENST00000454428 PPP4CP60510 307 aa21.18■□□□□ 0.98
UBE2D4-209ENST00000454428 CCAR1Q8IX12 1150 aaKnown RBP21.18■□□□□ 0.98
UBE2D4-209ENST00000454428 NPLOC4Q8TAT6 608 aa21.18■□□□□ 0.98
UBE2D4-209ENST00000454428 C12orf42Q96LP6 360 aa21.18■□□□□ 0.98
UBE2D4-209ENST00000454428 TTYH1Q9H313 450 aaPredicted RBP21.18■□□□□ 0.98
UBE2D4-209ENST00000454428 LRP2BPQ9P2M1 347 aa21.18■□□□□ 0.98
UBE2D4-209ENST00000454428 RABGAP1Q9Y3P9 1069 aa21.18■□□□□ 0.98
UBE2D4-209ENST00000454428 SLC15A5A6NIM6 579 aa21.17■□□□□ 0.98
UBE2D4-209ENST00000454428 HOXC6P09630 235 aa21.17■□□□□ 0.98
UBE2D4-209ENST00000454428 MFSD14CQ5VZR4 134 aa21.17■□□□□ 0.98
UBE2D4-209ENST00000454428 USP17L2Q6R6M4 530 aa21.17■□□□□ 0.98
UBE2D4-209ENST00000454428 CDCA7LQ96GN5 454 aa21.17■□□□□ 0.98
UBE2D4-209ENST00000454428 PRDM6Q9NQX0 595 aa21.17■□□□□ 0.98
UBE2D4-209ENST00000454428 CYP2C19P33261 490 aa21.16■□□□□ 0.98
UBE2D4-209ENST00000454428 GRB14Q14449 540 aa21.16■□□□□ 0.98
UBE2D4-209ENST00000454428 NAA16Q6N069 864 aaPredicted RBP21.16■□□□□ 0.98
UBE2D4-209ENST00000454428 BTBD7Q9P203 1132 aa21.16■□□□□ 0.98
UBE2D4-209ENST00000454428 SAP30BPQ9UHR5 308 aaKnown RBP21.16■□□□□ 0.98
UBE2D4-209ENST00000454428 HDAC5Q9UQL6 1122 aa21.16■□□□□ 0.98
UBE2D4-209ENST00000454428 GH2P01242 217 aa21.15■□□□□ 0.98
UBE2D4-209ENST00000454428 CYBAP13498 195 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 420.9 ms