RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 MS4A4AQ96JQ5 239 aa33.44■■■□□ 2.94
SMARCC1-203ENST00000454240 NAPBQ9H115 298 aa33.44■■■□□ 2.94
SMARCC1-203ENST00000454240 HSPD1P10809 573 aaKnown RBP33.43■■■□□ 2.94
SMARCC1-203ENST00000454240 SREBF2Q12772 1141 aa33.43■■■□□ 2.94
SMARCC1-203ENST00000454240 ALX1Q15699 326 aa33.43■■■□□ 2.94
SMARCC1-203ENST00000454240 CERKLQ49MI3 558 aaPredicted RBP33.43■■■□□ 2.94
SMARCC1-203ENST00000454240 C16orf86Q6ZW13 317 aa33.43■■■□□ 2.94
SMARCC1-203ENST00000454240 SLC44A5Q8NCS7 719 aa33.43■■■□□ 2.94
SMARCC1-203ENST00000454240 FRMD4AQ9P2Q2 1039 aaPredicted RBP33.43■■■□□ 2.94
SMARCC1-203ENST00000454240 ZHX2Q9Y6X8 837 aa33.43■■■□□ 2.94
SMARCC1-203ENST00000454240 TESPA1A2RU30 521 aaPredicted RBP33.42■■■□□ 2.94
SMARCC1-203ENST00000454240 MINDY4BA8MYZ0 360 aa33.42■■■□□ 2.94
SMARCC1-203ENST00000454240 GDF11O95390 407 aa33.42■■■□□ 2.94
SMARCC1-203ENST00000454240 ASNSP08243 561 aa33.42■■■□□ 2.94
SMARCC1-203ENST00000454240 KCNH4Q9UQ05 1017 aa33.42■■■□□ 2.94
SMARCC1-203ENST00000454240 AFG3L2Q9Y4W6 797 aa33.42■■■□□ 2.94
SMARCC1-203ENST00000454240 ROBO3Q96MS0 1386 aa33.42■■■□□ 2.94
SMARCC1-203ENST00000454240 CDK8P49336 464 aa33.41■■■□□ 2.94
SMARCC1-203ENST00000454240 GTF2A2P52657 109 aa33.41■■■□□ 2.94
SMARCC1-203ENST00000454240 SHROOM1Q2M3G4 852 aaPredicted RBP33.41■■■□□ 2.94
SMARCC1-203ENST00000454240 PTPRFP10586 1907 aa33.41■■■□□ 2.94
SMARCC1-203ENST00000454240 IL25Q9H293 177 aa33.4■■■□□ 2.94
SMARCC1-203ENST00000454240 ZBTB21Q9ULJ3 1066 aa33.4■■■□□ 2.94
SMARCC1-203ENST00000454240 CXCL11O14625 94 aa33.39■■■□□ 2.94
SMARCC1-203ENST00000454240 HSPA1AP0DMV8 641 aaKnown RBP33.39■■■□□ 2.94
SMARCC1-203ENST00000454240 HSPA1BP0DMV9 641 aaKnown RBP33.39■■■□□ 2.94
SMARCC1-203ENST00000454240 SNAPC2Q13487 334 aa33.39■■■□□ 2.94
SMARCC1-203ENST00000454240 CCDC84Q86UT8 332 aaPredicted RBP33.39■■■□□ 2.94
SMARCC1-203ENST00000454240 RUFY2Q8WXA3 655 aa33.39■■■□□ 2.94
SMARCC1-203ENST00000454240 TBC1D2Q9BYX2 928 aa33.39■■■□□ 2.94
SMARCC1-203ENST00000454240 ZMYM6O95789 1325 aa33.38■■■□□ 2.93
SMARCC1-203ENST00000454240 RAD50Q92878 1312 aa33.38■■■□□ 2.93
SMARCC1-203ENST00000454240 USP17L5A8MUK1 530 aa33.38■■■□□ 2.93
SMARCC1-203ENST00000454240 GH2P01242 217 aa33.38■■■□□ 2.93
SMARCC1-203ENST00000454240 FGAP02671 866 aa33.38■■■□□ 2.93
SMARCC1-203ENST00000454240 ABCB5Q2M3G0 1257 aa33.38■■■□□ 2.93
SMARCC1-203ENST00000454240 CCL15-CCL14A0A0B4J2E2 113 aa33.36■■■□□ 2.93
SMARCC1-203ENST00000454240 CETPP11597 493 aa33.36■■■□□ 2.93
SMARCC1-203ENST00000454240 PPARAQ07869 468 aa33.36■■■□□ 2.93
SMARCC1-203ENST00000454240 CCL15Q16663 113 aa33.36■■■□□ 2.93
SMARCC1-203ENST00000454240 BRI3BPQ8WY22 251 aa33.36■■■□□ 2.93
SMARCC1-203ENST00000454240 PTPN18Q99952 460 aa33.36■■■□□ 2.93
SMARCC1-203ENST00000454240 BEGAINQ9BUH8 593 aa33.36■■■□□ 2.93
SMARCC1-203ENST00000454240 IFNL1Q8IU54 200 aa33.35■■■□□ 2.93
SMARCC1-203ENST00000454240 ZNF280CQ8ND82 737 aa33.35■■■□□ 2.93
SMARCC1-203ENST00000454240 CCDC17Q96LX7 622 aa33.35■■■□□ 2.93
SMARCC1-203ENST00000454240 WDR18Q9BV38 432 aa33.35■■■□□ 2.93
SMARCC1-203ENST00000454240 CABP5Q9NP86 173 aa33.35■■■□□ 2.93
SMARCC1-203ENST00000454240 RNF186Q9NXI6 227 aa33.35■■■□□ 2.93
SMARCC1-203ENST00000454240 IGF2BP3O00425 579 aaKnown RBP eCLIP33.34■■■□□ 2.93
SMARCC1-203ENST00000454240 CA12O43570 354 aa33.34■■■□□ 2.93
SMARCC1-203ENST00000454240 DSCC1Q9BVC3 393 aa33.34■■■□□ 2.93
SMARCC1-203ENST00000454240 AS3MTQ9HBK9 375 aa33.34■■■□□ 2.93
SMARCC1-203ENST00000454240 ANAPC4Q9UJX5 808 aa33.34■■■□□ 2.93
SMARCC1-203ENST00000454240 SGSM2O43147 1006 aa33.33■■■□□ 2.93
SMARCC1-203ENST00000454240 GUCY1A2P33402 732 aa33.33■■■□□ 2.93
SMARCC1-203ENST00000454240 SPP2Q13103 211 aa33.33■■■□□ 2.93
SMARCC1-203ENST00000454240 MOGSQ13724 837 aa33.33■■■□□ 2.93
SMARCC1-203ENST00000454240 STK11IPQ8N1F8 1099 aa33.33■■■□□ 2.93
SMARCC1-203ENST00000454240 SAGE1Q9NXZ1 904 aa33.33■■■□□ 2.93
SMARCC1-203ENST00000454240 A0A0G2JLL6 359 aaPredicted RBP33.32■■■□□ 2.92
SMARCC1-203ENST00000454240 TRIM75PA6NK02 468 aa33.32■■■□□ 2.92
SMARCC1-203ENST00000454240 PRRT2Q7Z6L0 340 aaPredicted RBP33.32■■■□□ 2.92
SMARCC1-203ENST00000454240 FOXN1O15353 648 aa33.31■■■□□ 2.92
SMARCC1-203ENST00000454240 SLC3A2P08195 630 aaKnown RBP33.31■■■□□ 2.92
SMARCC1-203ENST00000454240 AKR1B1P15121 316 aa33.31■■■□□ 2.92
SMARCC1-203ENST00000454240 RASA1P20936 1047 aa33.31■■■□□ 2.92
SMARCC1-203ENST00000454240 MKNK2Q9HBH9 465 aa33.31■■■□□ 2.92
SMARCC1-203ENST00000454240 ZNF287Q9HBT7 754 aa33.31■■■□□ 2.92
SMARCC1-203ENST00000454240 LAMA4Q16363 1823 aa33.3■■■□□ 2.92
SMARCC1-203ENST00000454240 GREB1LQ9C091 1923 aaPredicted RBP33.3■■■□□ 2.92
SMARCC1-203ENST00000454240 MPHOSPH10O00566 681 aaKnown RBP33.3■■■□□ 2.92
SMARCC1-203ENST00000454240 TRPA1O75762 1119 aa33.3■■■□□ 2.92
SMARCC1-203ENST00000454240 RAB3GAP1Q15042 981 aa33.3■■■□□ 2.92
SMARCC1-203ENST00000454240 TMEM179Q6ZVK1 233 aa33.3■■■□□ 2.92
SMARCC1-203ENST00000454240 ALDH1A1P00352 501 aa33.29■■■□□ 2.92
SMARCC1-203ENST00000454240 CTDSPL2Q05D32 466 aa33.29■■■□□ 2.92
SMARCC1-203ENST00000454240 PDE4BQ07343 736 aa33.29■■■□□ 2.92
SMARCC1-203ENST00000454240 SEPT2Q15019 361 aa33.29■■■□□ 2.92
SMARCC1-203ENST00000454240 OTUD7BQ6GQQ9 843 aa33.29■■■□□ 2.92
SMARCC1-203ENST00000454240 BTBD19C9JJ37 291 aa33.28■■■□□ 2.92
SMARCC1-203ENST00000454240 FAM43AQ8N2R8 423 aa33.28■■■□□ 2.92
SMARCC1-203ENST00000454240 LOC285556D6RIA3 1793 aa33.28■■■□□ 2.92
SMARCC1-203ENST00000454240 BACE1P56817 501 aa33.27■■■□□ 2.92
SMARCC1-203ENST00000454240 SH3D19Q5HYK7 790 aa33.27■■■□□ 2.92
SMARCC1-203ENST00000454240 FASTKD5Q7L8L6 764 aaKnown RBP33.27■■■□□ 2.92
SMARCC1-203ENST00000454240 CFHR5Q9BXR6 569 aa33.27■■■□□ 2.92
SMARCC1-203ENST00000454240 DDX52Q9Y2R4 599 aaKnown RBP eCLIP33.27■■■□□ 2.92
SMARCC1-203ENST00000454240 PRDM1O75626 825 aa33.26■■■□□ 2.91
SMARCC1-203ENST00000454240 FGRP09769 529 aa33.26■■■□□ 2.91
SMARCC1-203ENST00000454240 ZNF444Q8N0Y2 327 aaPredicted RBP33.26■■■□□ 2.91
SMARCC1-203ENST00000454240 ESYT1Q9BSJ8 1104 aa33.26■■■□□ 2.91
SMARCC1-203ENST00000454240 ZCCHC17Q9NP64 241 aaKnown RBP33.26■■■□□ 2.91
SMARCC1-203ENST00000454240 TACC3Q9Y6A5 838 aa33.26■■■□□ 2.91
SMARCC1-203ENST00000454240 C19orf81C9J6K1 198 aa33.25■■■□□ 2.91
SMARCC1-203ENST00000454240 USP17L10C9JJH3 530 aa33.25■■■□□ 2.91
SMARCC1-203ENST00000454240 GPAT2Q6NUI2 795 aa33.25■■■□□ 2.91
SMARCC1-203ENST00000454240 ANKRD23Q86SG2 305 aa33.25■■■□□ 2.91
SMARCC1-203ENST00000454240 GNL3Q9BVP2 549 aaKnown RBP eCLIP33.25■■■□□ 2.91
SMARCC1-203ENST00000454240 CDC45O75419 566 aa33.24■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms