RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 MCM9Q9NXL9 1143 aa16.99■□□□□ 0.31
RTFDC1-204ENST00000449062 TRIM17Q9Y577 477 aa16.99■□□□□ 0.31
RTFDC1-204ENST00000449062 SMIM22K7EJ46 135 aa16.98■□□□□ 0.31
RTFDC1-204ENST00000449062 RNF113AO15541 343 aaKnown RBP16.98■□□□□ 0.31
RTFDC1-204ENST00000449062 GLRX3O76003 335 aaKnown RBP16.98■□□□□ 0.31
RTFDC1-204ENST00000449062 GDF11O95390 407 aa16.98■□□□□ 0.31
RTFDC1-204ENST00000449062 CYP2D6P10635 497 aa16.98■□□□□ 0.31
RTFDC1-204ENST00000449062 CTGFP29279 349 aa16.98■□□□□ 0.31
RTFDC1-204ENST00000449062 TREML2Q5T2D2 321 aa16.98■□□□□ 0.31
RTFDC1-204ENST00000449062 PROCA1Q8NCQ7 364 aaPredicted RBP16.98■□□□□ 0.31
RTFDC1-204ENST00000449062 EFCC1Q9HA90 598 aa16.98■□□□□ 0.31
RTFDC1-204ENST00000449062 CPA4Q9UI42 421 aa16.98■□□□□ 0.31
RTFDC1-204ENST00000449062 ZBTB21Q9ULJ3 1066 aa16.98■□□□□ 0.31
RTFDC1-204ENST00000449062 AGTPBP1Q9UPW5 1226 aa16.98■□□□□ 0.31
RTFDC1-204ENST00000449062 PTPN22Q9Y2R2 807 aa16.98■□□□□ 0.31
RTFDC1-204ENST00000449062 DOCK1Q14185 1865 aa16.97■□□□□ 0.31
RTFDC1-204ENST00000449062 POLR3DP05423 398 aaPredicted RBP16.97■□□□□ 0.31
RTFDC1-204ENST00000449062 MX1P20591 662 aa16.97■□□□□ 0.31
RTFDC1-204ENST00000449062 HMGCS2P54868 508 aa16.97■□□□□ 0.31
RTFDC1-204ENST00000449062 BACE1P56817 501 aa16.97■□□□□ 0.31
RTFDC1-204ENST00000449062 LACTBP83111 547 aaPredicted RBP16.97■□□□□ 0.31
RTFDC1-204ENST00000449062 GADL1Q6ZQY3 521 aa16.97■□□□□ 0.31
RTFDC1-204ENST00000449062 ARHGAP39Q9C0H5 1083 aa16.97■□□□□ 0.31
RTFDC1-204ENST00000449062 RWDD1Q9H446 243 aaPredicted RBP16.97■□□□□ 0.31
RTFDC1-204ENST00000449062 ERC2O15083 957 aa16.96■□□□□ 0.31
RTFDC1-204ENST00000449062 GH2P01242 217 aa16.96■□□□□ 0.31
RTFDC1-204ENST00000449062 GUCY1A2P33402 732 aa16.96■□□□□ 0.31
RTFDC1-204ENST00000449062 C12orf60Q5U649 245 aa16.96■□□□□ 0.31
RTFDC1-204ENST00000449062 AS3MTQ9HBK9 375 aa16.96■□□□□ 0.31
RTFDC1-204ENST00000449062 TAOK2Q9UL54 1235 aa16.96■□□□□ 0.31
RTFDC1-204ENST00000449062 MYH1P12882 1939 aa16.96■□□□□ 0.3
RTFDC1-204ENST00000449062 GSG1L2A8MUP6 293 aa16.95■□□□□ 0.3
RTFDC1-204ENST00000449062 C19orf81C9J6K1 198 aa16.95■□□□□ 0.3
RTFDC1-204ENST00000449062 USP17L12C9JPN9 530 aa16.95■□□□□ 0.3
RTFDC1-204ENST00000449062 USP17L21D6R901 530 aa16.95■□□□□ 0.3
RTFDC1-204ENST00000449062 ZFYP08048 801 aaPredicted RBP16.95■□□□□ 0.3
RTFDC1-204ENST00000449062 PDE1AP54750 535 aa16.95■□□□□ 0.3
RTFDC1-204ENST00000449062 CERKLQ49MI3 558 aaPredicted RBP16.95■□□□□ 0.3
RTFDC1-204ENST00000449062 APPBP2Q92624 585 aa16.95■□□□□ 0.3
RTFDC1-204ENST00000449062 PARK7Q99497 189 aaKnown RBP16.95■□□□□ 0.3
RTFDC1-204ENST00000449062 TRIM34Q9BYJ4 488 aa16.95■□□□□ 0.3
RTFDC1-204ENST00000449062 EMILIN3Q9NT22 766 aa16.95■□□□□ 0.3
RTFDC1-204ENST00000449062 KIAA0100Q14667 2235 aaKnown RBP16.94■□□□□ 0.3
RTFDC1-204ENST00000449062 PTPRFP10586 1907 aa16.94■□□□□ 0.3
RTFDC1-204ENST00000449062 CYP2D7A0A087X1C5 515 aa16.94■□□□□ 0.3
RTFDC1-204ENST00000449062 USP17L10C9JJH3 530 aa16.94■□□□□ 0.3
RTFDC1-204ENST00000449062 HOXA7P31268 230 aaPredicted RBP16.94■□□□□ 0.3
RTFDC1-204ENST00000449062 CTR9Q6PD62 1173 aa16.94■□□□□ 0.3
RTFDC1-204ENST00000449062 DYNLL2Q96FJ2 89 aa16.94■□□□□ 0.3
RTFDC1-204ENST00000449062 TRIM47Q96LD4 638 aa16.94■□□□□ 0.3
RTFDC1-204ENST00000449062 SLC4A4Q9Y6R1 1079 aa16.94■□□□□ 0.3
RTFDC1-204ENST00000449062 NUCB1Q02818 461 aa16.93■□□□□ 0.3
RTFDC1-204ENST00000449062 MTMR2Q13614 643 aa16.93■□□□□ 0.3
RTFDC1-204ENST00000449062 ARHGEF6Q15052 776 aa16.93■□□□□ 0.3
RTFDC1-204ENST00000449062 ABCB5Q2M3G0 1257 aa16.93■□□□□ 0.3
RTFDC1-204ENST00000449062 GIMAP6Q6P9H5 292 aa16.93■□□□□ 0.3
RTFDC1-204ENST00000449062 SIAH1Q8IUQ4 282 aa16.93■□□□□ 0.3
RTFDC1-204ENST00000449062 SLC44A5Q8NCS7 719 aa16.93■□□□□ 0.3
RTFDC1-204ENST00000449062 DDX60LQ5H9U9 1706 aaKnown RBP16.93■□□□□ 0.3
RTFDC1-204ENST00000449062 GNRH1P01148 92 aa16.92■□□□□ 0.3
RTFDC1-204ENST00000449062 PSMC4P43686 418 aa16.92■□□□□ 0.3
RTFDC1-204ENST00000449062 SBK1Q52WX2 424 aa16.92■□□□□ 0.3
RTFDC1-204ENST00000449062 ZMYM1Q5SVZ6 1142 aa16.92■□□□□ 0.3
RTFDC1-204ENST00000449062 POTEEQ6S8J3 1075 aa16.92■□□□□ 0.3
RTFDC1-204ENST00000449062 ACER1Q8TDN7 264 aa16.92■□□□□ 0.3
RTFDC1-204ENST00000449062 SEC62Q99442 399 aaKnown RBP16.92■□□□□ 0.3
RTFDC1-204ENST00000449062 ASCC2Q9H1I8 757 aaPredicted RBP16.92■□□□□ 0.3
RTFDC1-204ENST00000449062 M0R2C6 588 aa16.91■□□□□ 0.3
RTFDC1-204ENST00000449062 GPAA1O43292 621 aa16.91■□□□□ 0.3
RTFDC1-204ENST00000449062 CDK8P49336 464 aa16.91■□□□□ 0.3
RTFDC1-204ENST00000449062 SEPT2Q15019 361 aa16.91■□□□□ 0.3
RTFDC1-204ENST00000449062 C16orf86Q6ZW13 317 aa16.91■□□□□ 0.3
RTFDC1-204ENST00000449062 ARMC5Q96C12 935 aa16.91■□□□□ 0.3
RTFDC1-204ENST00000449062 C12orf42Q96LP6 360 aa16.91■□□□□ 0.3
RTFDC1-204ENST00000449062 P2RX7Q99572 595 aaKnown RBP16.91■□□□□ 0.3
RTFDC1-204ENST00000449062 LNPKQ9C0E8 428 aa16.91■□□□□ 0.3
RTFDC1-204ENST00000449062 KIAA1683Q9H0B3 1180 aa16.91■□□□□ 0.3
RTFDC1-204ENST00000449062 SWAP70Q9UH65 585 aa16.91■□□□□ 0.3
RTFDC1-204ENST00000449062 CENPFP49454 3210 aa16.91■□□□□ 0.3
RTFDC1-204ENST00000449062 A0A1W2PRG0 241 aa16.9■□□□□ 0.3
RTFDC1-204ENST00000449062 KIF22Q14807 665 aa16.9■□□□□ 0.3
RTFDC1-204ENST00000449062 B4GALNT3Q6L9W6 998 aa16.9■□□□□ 0.3
RTFDC1-204ENST00000449062 USP17L2Q6R6M4 530 aa16.9■□□□□ 0.3
RTFDC1-204ENST00000449062 CHD1LQ86WJ1 897 aa16.9■□□□□ 0.3
RTFDC1-204ENST00000449062 PLEKHM2Q8IWE5 1019 aa16.9■□□□□ 0.3
RTFDC1-204ENST00000449062 OSBPL3Q9H4L5 887 aa16.9■□□□□ 0.3
RTFDC1-204ENST00000449062 EPB41L4AQ9HCS5 686 aaPredicted RBP16.9■□□□□ 0.3
RTFDC1-204ENST00000449062 CABP5Q9NP86 173 aa16.9■□□□□ 0.3
RTFDC1-204ENST00000449062 SRRDQ9UH36 339 aa16.9■□□□□ 0.3
RTFDC1-204ENST00000449062 PTCH2Q9Y6C5 1203 aa16.9■□□□□ 0.3
RTFDC1-204ENST00000449062 PATL2C9JE40 543 aaKnown RBP16.89■□□□□ 0.29
RTFDC1-204ENST00000449062 FOXP2O15409 715 aa16.89■□□□□ 0.29
RTFDC1-204ENST00000449062 OSBPP22059 807 aa16.89■□□□□ 0.29
RTFDC1-204ENST00000449062 GCLCP48506 637 aaPredicted RBP16.89■□□□□ 0.29
RTFDC1-204ENST00000449062 PRMT2P55345 433 aa16.89■□□□□ 0.29
RTFDC1-204ENST00000449062 PABPC4Q13310 644 aaKnown RBP eCLIP16.89■□□□□ 0.29
RTFDC1-204ENST00000449062 RAB3GAP1Q15042 981 aa16.89■□□□□ 0.29
RTFDC1-204ENST00000449062 LRRFIP1Q32MZ4 808 aaKnown RBP16.89■□□□□ 0.29
RTFDC1-204ENST00000449062 TICAM2Q86XR7 235 aa16.89■□□□□ 0.29
RTFDC1-204ENST00000449062 EVI5LQ96CN4 794 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms