RNA–Protein interactions for RNA: ENST00000443660.5

MRPL40-202, Transcript of mitochondrial ribosomal protein L40, humanhuman

TSL 2

Gene MRPL40, Length 954 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-202ENST00000443660 LRP2BPQ9P2M1 347 aa18.32■□□□□ 0.52
MRPL40-202ENST00000443660 PRKAG2Q9UGJ0 569 aa18.32■□□□□ 0.52
MRPL40-202ENST00000443660 PHIPQ8WWQ0 1821 aa18.32■□□□□ 0.52
MRPL40-202ENST00000443660 COL2A1P02458 1487 aaPredicted RBP18.32■□□□□ 0.52
MRPL40-202ENST00000443660 PTPRFP10586 1907 aa18.31■□□□□ 0.52
MRPL40-202ENST00000443660 PEX10O60683 326 aa18.31■□□□□ 0.52
MRPL40-202ENST00000443660 GLRX3O76003 335 aaKnown RBP18.31■□□□□ 0.52
MRPL40-202ENST00000443660 BAG3O95817 575 aa18.31■□□□□ 0.52
MRPL40-202ENST00000443660 ERVK-9P63128 1117 aa18.31■□□□□ 0.52
MRPL40-202ENST00000443660 ERVK-24P63145 666 aa18.31■□□□□ 0.52
MRPL40-202ENST00000443660 Q3C1V9 767 aa18.31■□□□□ 0.52
MRPL40-202ENST00000443660 GPR142Q7Z601 462 aa18.31■□□□□ 0.52
MRPL40-202ENST00000443660 FOXP4Q8IVH2 680 aaPredicted RBP18.31■□□□□ 0.52
MRPL40-202ENST00000443660 CRACR2BQ8N4Y2 399 aaPredicted RBP18.31■□□□□ 0.52
MRPL40-202ENST00000443660 USP6NLQ92738 828 aa18.31■□□□□ 0.52
MRPL40-202ENST00000443660 FAM161BQ96MY7 647 aa18.31■□□□□ 0.52
MRPL40-202ENST00000443660 PAGR1Q9BTK6 254 aa18.31■□□□□ 0.52
MRPL40-202ENST00000443660 SENP6Q9GZR1 1112 aaPredicted RBP18.31■□□□□ 0.52
MRPL40-202ENST00000443660 GINM1Q9NU53 330 aa18.31■□□□□ 0.52
MRPL40-202ENST00000443660 DOCK3Q8IZD9 2030 aa18.31■□□□□ 0.52
MRPL40-202ENST00000443660 DDX60LQ5H9U9 1706 aaKnown RBP18.31■□□□□ 0.52
MRPL40-202ENST00000443660 CCL14Q16627 93 aa18.3■□□□□ 0.52
MRPL40-202ENST00000443660 MORN1Q5T089 497 aa18.3■□□□□ 0.52
MRPL40-202ENST00000443660 MFSD14CQ5VZR4 134 aa18.3■□□□□ 0.52
MRPL40-202ENST00000443660 SH3RF3Q8TEJ3 882 aaPredicted RBP18.3■□□□□ 0.52
MRPL40-202ENST00000443660 EDC3Q96F86 508 aaKnown RBP18.3■□□□□ 0.52
MRPL40-202ENST00000443660 GUCD1Q96NT3 240 aa18.3■□□□□ 0.52
MRPL40-202ENST00000443660 APBA2Q99767 749 aa18.3■□□□□ 0.52
MRPL40-202ENST00000443660 PLCG2P16885 1265 aa18.29■□□□□ 0.52
MRPL40-202ENST00000443660 ZNF697Q5TEC3 545 aa18.29■□□□□ 0.52
MRPL40-202ENST00000443660 API5Q9BZZ5 524 aaKnown RBP18.29■□□□□ 0.52
MRPL40-202ENST00000443660 PORCNQ9H237 461 aa18.29■□□□□ 0.52
MRPL40-202ENST00000443660 SRGAP3O43295 1099 aa18.28■□□□□ 0.52
MRPL40-202ENST00000443660 CCNA1P78396 465 aa18.28■□□□□ 0.52
MRPL40-202ENST00000443660 MAP2K5Q13163 448 aa18.28■□□□□ 0.52
MRPL40-202ENST00000443660 PI16Q6UXB8 463 aa18.28■□□□□ 0.52
MRPL40-202ENST00000443660 NOB1Q9ULX3 412 aaKnown RBP18.28■□□□□ 0.52
MRPL40-202ENST00000443660 MSCO60682 206 aa18.27■□□□□ 0.52
MRPL40-202ENST00000443660 CNGA1P29973 690 aa18.27■□□□□ 0.52
MRPL40-202ENST00000443660 NAA16Q6N069 864 aaPredicted RBP18.27■□□□□ 0.52
MRPL40-202ENST00000443660 USP17L2Q6R6M4 530 aa18.27■□□□□ 0.52
MRPL40-202ENST00000443660 ATF7IPQ6VMQ6 1270 aa18.27■□□□□ 0.52
MRPL40-202ENST00000443660 AATFQ9NY61 560 aaKnown RBP eCLIP18.27■□□□□ 0.52
MRPL40-202ENST00000443660 LOC285556D6RIA3 1793 aa18.27■□□□□ 0.51
MRPL40-202ENST00000443660 GDF11O95390 407 aa18.26■□□□□ 0.51
MRPL40-202ENST00000443660 UQCRFS1P1P0C7P4 283 aa18.26■□□□□ 0.51
MRPL40-202ENST00000443660 ARID4AP29374 1257 aaPredicted RBP18.26■□□□□ 0.51
MRPL40-202ENST00000443660 ATN1P54259 1190 aaPredicted RBP18.26■□□□□ 0.51
MRPL40-202ENST00000443660 JAG1P78504 1218 aa18.26■□□□□ 0.51
MRPL40-202ENST00000443660 ATP2B2Q01814 1243 aa18.26■□□□□ 0.51
MRPL40-202ENST00000443660 SLFN5Q08AF3 891 aa18.26■□□□□ 0.51
MRPL40-202ENST00000443660 WDR78Q5VTH9 848 aa18.26■□□□□ 0.51
MRPL40-202ENST00000443660 MAPKAPK5Q8IW41 473 aa18.26■□□□□ 0.51
MRPL40-202ENST00000443660 TGFBRAP1Q8WUH2 860 aa18.26■□□□□ 0.51
MRPL40-202ENST00000443660 EMILIN3Q9NT22 766 aa18.26■□□□□ 0.51
MRPL40-202ENST00000443660 DDX20Q9UHI6 824 aaKnown RBP18.26■□□□□ 0.51
MRPL40-202ENST00000443660 RABGAP1Q9Y3P9 1069 aa18.26■□□□□ 0.51
MRPL40-202ENST00000443660 HLA-DOAP06340 250 aa18.25■□□□□ 0.51
MRPL40-202ENST00000443660 GNAI3P08754 354 aa18.25■□□□□ 0.51
MRPL40-202ENST00000443660 METTL16Q86W50 562 aaKnown RBP18.25■□□□□ 0.51
MRPL40-202ENST00000443660 LPAR1Q92633 364 aa18.25■□□□□ 0.51
MRPL40-202ENST00000443660 MEIS3Q99687 375 aa18.25■□□□□ 0.51
MRPL40-202ENST00000443660 PALD1Q9ULE6 856 aa18.25■□□□□ 0.51
MRPL40-202ENST00000443660 ZBTB21Q9ULJ3 1066 aa18.25■□□□□ 0.51
MRPL40-202ENST00000443660 IVNS1ABPQ9Y6Y0 642 aa18.25■□□□□ 0.51
MRPL40-202ENST00000443660 SLC15A5A6NIM6 579 aa18.24■□□□□ 0.51
MRPL40-202ENST00000443660 USP17L15C9J2P7 530 aa18.24■□□□□ 0.51
MRPL40-202ENST00000443660 USP17L13C9JLJ4 530 aa18.24■□□□□ 0.51
MRPL40-202ENST00000443660 USP17L11C9JVI0 530 aa18.24■□□□□ 0.51
MRPL40-202ENST00000443660 USP17L18D6R9N7 530 aa18.24■□□□□ 0.51
MRPL40-202ENST00000443660 USP17L22D6RA61 530 aa18.24■□□□□ 0.51
MRPL40-202ENST00000443660 USP17L17D6RBQ6 530 aa18.24■□□□□ 0.51
MRPL40-202ENST00000443660 USP17L19D6RCP7 530 aa18.24■□□□□ 0.51
MRPL40-202ENST00000443660 USP17L20D6RJB6 530 aa18.24■□□□□ 0.51
MRPL40-202ENST00000443660 PPP4CP60510 307 aa18.24■□□□□ 0.51
MRPL40-202ENST00000443660 USP17L24Q0WX57 530 aa18.24■□□□□ 0.51
MRPL40-202ENST00000443660 CDX2Q99626 313 aaPredicted RBP18.24■□□□□ 0.51
MRPL40-202ENST00000443660 FEZ1Q99689 392 aa18.24■□□□□ 0.51
MRPL40-202ENST00000443660 NDUFB9Q9Y6M9 179 aa18.24■□□□□ 0.51
MRPL40-202ENST00000443660 DNM1LO00429 736 aa18.23■□□□□ 0.51
MRPL40-202ENST00000443660 PTPREP23469 700 aa18.23■□□□□ 0.51
MRPL40-202ENST00000443660 MCAMP43121 646 aa18.23■□□□□ 0.51
MRPL40-202ENST00000443660 G3BP1Q13283 466 aaKnown RBP eCLIP18.23■□□□□ 0.51
MRPL40-202ENST00000443660 ARRDC4Q8NCT1 418 aa18.23■□□□□ 0.51
MRPL40-202ENST00000443660 DNAJC18Q9H819 358 aa18.23■□□□□ 0.51
MRPL40-202ENST00000443660 PLXNB2O15031 1838 aa18.22■□□□□ 0.51
MRPL40-202ENST00000443660 RTP1P59025 263 aa18.22■□□□□ 0.51
MRPL40-202ENST00000443660 MTX1Q13505 466 aa18.22■□□□□ 0.51
MRPL40-202ENST00000443660 MAFAQ8NHW3 353 aaPredicted RBP18.22■□□□□ 0.51
MRPL40-202ENST00000443660 SEMA6BQ9H3T3 888 aa18.22■□□□□ 0.51
MRPL40-202ENST00000443660 FLRT1Q9NZU1 646 aa18.22■□□□□ 0.51
MRPL40-202ENST00000443660 ATP11BQ9Y2G3 1177 aa18.22■□□□□ 0.51
MRPL40-202ENST00000443660 UNC80Q8N2C7 3258 aa18.22■□□□□ 0.51
MRPL40-202ENST00000443660 FLT1P17948 1338 aa18.22■□□□□ 0.51
MRPL40-202ENST00000443660 GH2P01242 217 aa18.21■□□□□ 0.51
MRPL40-202ENST00000443660 USP14P54578 494 aa18.21■□□□□ 0.51
MRPL40-202ENST00000443660 SHHQ15465 462 aa18.21■□□□□ 0.51
MRPL40-202ENST00000443660 ZYXQ15942 572 aaKnown RBP18.21■□□□□ 0.51
MRPL40-202ENST00000443660 SHROOM1Q2M3G4 852 aaPredicted RBP18.21■□□□□ 0.51
MRPL40-202ENST00000443660 CCDC158Q5M9N0 1113 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms