RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 COL2A1P02458 1487 aaPredicted RBP10.61□□□□□ -0.71
USP6NL-203ENST00000443016 MYCP01106 439 aaPredicted RBP10.61□□□□□ -0.71
USP6NL-203ENST00000443016 GNRH1P01148 92 aa10.61□□□□□ -0.71
USP6NL-203ENST00000443016 HOXD10P28358 340 aa10.61□□□□□ -0.71
USP6NL-203ENST00000443016 GPAT2Q6NUI2 795 aa10.61□□□□□ -0.71
USP6NL-203ENST00000443016 ZNF280CQ8ND82 737 aa10.61□□□□□ -0.71
USP6NL-203ENST00000443016 TMEM106CQ9BVX2 250 aa10.61□□□□□ -0.71
USP6NL-203ENST00000443016 AS3MTQ9HBK9 375 aa10.61□□□□□ -0.71
USP6NL-203ENST00000443016 PTCH2Q9Y6C5 1203 aa10.61□□□□□ -0.71
USP6NL-203ENST00000443016 USP17L5A8MUK1 530 aa10.6□□□□□ -0.71
USP6NL-203ENST00000443016 ASNSP08243 561 aa10.6□□□□□ -0.71
USP6NL-203ENST00000443016 TMED8Q6PL24 325 aaPredicted RBP10.6□□□□□ -0.71
USP6NL-203ENST00000443016 HS6ST3Q8IZP7 471 aa10.6□□□□□ -0.71
USP6NL-203ENST00000443016 LRRCC1Q9C099 1032 aa10.6□□□□□ -0.71
USP6NL-203ENST00000443016 HMGCS2P54868 508 aa10.6□□□□□ -0.71
USP6NL-203ENST00000443016 EXOC6Q8TAG9 804 aa10.6□□□□□ -0.71
USP6NL-203ENST00000443016 TBC1D2Q9BYX2 928 aa10.6□□□□□ -0.71
USP6NL-203ENST00000443016 BOLA2Q9H3K6 86 aa10.6□□□□□ -0.71
USP6NL-203ENST00000443016 PNMA3Q9UL41 463 aa10.6□□□□□ -0.71
USP6NL-203ENST00000443016 MAGEB6P1A0A0J9YX57 407 aa10.59□□□□□ -0.71
USP6NL-203ENST00000443016 GDF11O95390 407 aa10.59□□□□□ -0.71
USP6NL-203ENST00000443016 AGTPBP1Q9UPW5 1226 aa10.59□□□□□ -0.71
USP6NL-203ENST00000443016 PDE6AP16499 860 aa10.59□□□□□ -0.71
USP6NL-203ENST00000443016 PRMT2P55345 433 aa10.59□□□□□ -0.71
USP6NL-203ENST00000443016 FCGRTP55899 365 aa10.59□□□□□ -0.71
USP6NL-203ENST00000443016 PABPC4Q13310 644 aaKnown RBP eCLIP10.59□□□□□ -0.71
USP6NL-203ENST00000443016 RRP1BQ14684 758 aaKnown RBP10.59□□□□□ -0.71
USP6NL-203ENST00000443016 TTC6Q86TZ1 520 aa10.59□□□□□ -0.71
USP6NL-203ENST00000443016 PROCA1Q8NCQ7 364 aaPredicted RBP10.59□□□□□ -0.71
USP6NL-203ENST00000443016 RAET1EQ8TD07 263 aa10.59□□□□□ -0.71
USP6NL-203ENST00000443016 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.59□□□□□ -0.71
USP6NL-203ENST00000443016 ARMC5Q96C12 935 aa10.59□□□□□ -0.71
USP6NL-203ENST00000443016 TRIM47Q96LD4 638 aa10.59□□□□□ -0.71
USP6NL-203ENST00000443016 PAG1Q9NWQ8 432 aa10.59□□□□□ -0.71
USP6NL-203ENST00000443016 SLC45A1Q9Y2W3 748 aa10.59□□□□□ -0.71
USP6NL-203ENST00000443016 MAST2Q6P0Q8 1798 aa10.58□□□□□ -0.72
USP6NL-203ENST00000443016 TREML2Q5T2D2 321 aa10.58□□□□□ -0.72
USP6NL-203ENST00000443016 SH3TC2Q8TF17 1288 aa10.58□□□□□ -0.72
USP6NL-203ENST00000443016 EDC3Q96F86 508 aaKnown RBP10.58□□□□□ -0.72
USP6NL-203ENST00000443016 CRNKL1Q9BZJ0 848 aaKnown RBP10.58□□□□□ -0.72
USP6NL-203ENST00000443016 TMOD4Q9NZQ9 345 aa10.58□□□□□ -0.72
USP6NL-203ENST00000443016 SERPINB13Q9UIV8 391 aa10.58□□□□□ -0.72
USP6NL-203ENST00000443016 ZNF532Q9HCE3 1301 aa10.58□□□□□ -0.72
USP6NL-203ENST00000443016 POLR3DP05423 398 aaPredicted RBP10.58□□□□□ -0.72
USP6NL-203ENST00000443016 BCRP11274 1271 aa10.58□□□□□ -0.72
USP6NL-203ENST00000443016 MTMR2Q13614 643 aa10.58□□□□□ -0.72
USP6NL-203ENST00000443016 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.58□□□□□ -0.72
USP6NL-203ENST00000443016 DNAJC18Q9H819 358 aa10.58□□□□□ -0.72
USP6NL-203ENST00000443016 BIN2Q9UBW5 565 aaPredicted RBP10.58□□□□□ -0.72
USP6NL-203ENST00000443016 SRRDQ9UH36 339 aa10.58□□□□□ -0.72
USP6NL-203ENST00000443016 DOCK1Q14185 1865 aa10.58□□□□□ -0.72
USP6NL-203ENST00000443016 MYO5AQ9Y4I1 1855 aaKnown RBP10.57□□□□□ -0.72
USP6NL-203ENST00000443016 POTEFA5A3E0 1075 aa10.57□□□□□ -0.72
USP6NL-203ENST00000443016 SMARCA5O60264 1052 aaPredicted RBP10.57□□□□□ -0.72
USP6NL-203ENST00000443016 ATP5JP18859 108 aa10.57□□□□□ -0.72
USP6NL-203ENST00000443016 OSBPP22059 807 aa10.57□□□□□ -0.72
USP6NL-203ENST00000443016 MFAP1P55081 439 aaKnown RBP10.57□□□□□ -0.72
USP6NL-203ENST00000443016 BACE1P56817 501 aa10.57□□□□□ -0.72
USP6NL-203ENST00000443016 ANKRD13CQ8N6S4 541 aa10.57□□□□□ -0.72
USP6NL-203ENST00000443016 ZNF333Q96JL9 665 aa10.57□□□□□ -0.72
USP6NL-203ENST00000443016 RIOK1Q9BRS2 568 aaKnown RBP10.57□□□□□ -0.72
USP6NL-203ENST00000443016 MCM9Q9NXL9 1143 aa10.57□□□□□ -0.72
USP6NL-203ENST00000443016 MYPNQ86TC9 1320 aa10.57□□□□□ -0.72
USP6NL-203ENST00000443016 ADGRA2Q96PE1 1338 aa10.57□□□□□ -0.72
USP6NL-203ENST00000443016 USP17L10C9JJH3 530 aa10.57□□□□□ -0.72
USP6NL-203ENST00000443016 TNPO2O14787 897 aaKnown RBP10.57□□□□□ -0.72
USP6NL-203ENST00000443016 CTGFP29279 349 aa10.57□□□□□ -0.72
USP6NL-203ENST00000443016 IRX3P78415 501 aaPredicted RBP10.57□□□□□ -0.72
USP6NL-203ENST00000443016 METTL16Q86W50 562 aaKnown RBP10.57□□□□□ -0.72
USP6NL-203ENST00000443016 RNF25Q96BH1 459 aaPredicted RBP10.57□□□□□ -0.72
USP6NL-203ENST00000443016 PPP4R2Q9NY27 417 aa10.57□□□□□ -0.72
USP6NL-203ENST00000443016 ZBTB21Q9ULJ3 1066 aa10.57□□□□□ -0.72
USP6NL-203ENST00000443016 GH2P01242 217 aa10.56□□□□□ -0.72
USP6NL-203ENST00000443016 RAB3GAP1Q15042 981 aa10.56□□□□□ -0.72
USP6NL-203ENST00000443016 GPATCH3Q96I76 525 aa10.56□□□□□ -0.72
USP6NL-203ENST00000443016 FEZ1Q99689 392 aa10.56□□□□□ -0.72
USP6NL-203ENST00000443016 WDR18Q9BV38 432 aa10.56□□□□□ -0.72
USP6NL-203ENST00000443016 GINM1Q9NU53 330 aa10.56□□□□□ -0.72
USP6NL-203ENST00000443016 GRK4P32298 578 aa10.56□□□□□ -0.72
USP6NL-203ENST00000443016 PRKCZQ05513 592 aa10.56□□□□□ -0.72
USP6NL-203ENST00000443016 SHROOM1Q2M3G4 852 aaPredicted RBP10.56□□□□□ -0.72
USP6NL-203ENST00000443016 CERKLQ49MI3 558 aaPredicted RBP10.56□□□□□ -0.72
USP6NL-203ENST00000443016 SDR42E1Q8WUS8 393 aa10.56□□□□□ -0.72
USP6NL-203ENST00000443016 HAUS7Q99871 368 aa10.56□□□□□ -0.72
USP6NL-203ENST00000443016 EHD4Q9H223 541 aa10.56□□□□□ -0.72
USP6NL-203ENST00000443016 CABP5Q9NP86 173 aa10.56□□□□□ -0.72
USP6NL-203ENST00000443016 C19orf81C9J6K1 198 aa10.55□□□□□ -0.72
USP6NL-203ENST00000443016 EN2P19622 333 aaPredicted RBP10.55□□□□□ -0.72
USP6NL-203ENST00000443016 GCLCP48506 637 aaPredicted RBP10.55□□□□□ -0.72
USP6NL-203ENST00000443016 PLCD1P51178 756 aa10.55□□□□□ -0.72
USP6NL-203ENST00000443016 SH3D19Q5HYK7 790 aa10.55□□□□□ -0.72
USP6NL-203ENST00000443016 COA7Q96BR5 231 aa10.55□□□□□ -0.72
USP6NL-203ENST00000443016 DDRGK1Q96HY6 314 aa10.55□□□□□ -0.72
USP6NL-203ENST00000443016 ASCC2Q9H1I8 757 aaPredicted RBP10.55□□□□□ -0.72
USP6NL-203ENST00000443016 ARMT1Q9H993 441 aa10.55□□□□□ -0.72
USP6NL-203ENST00000443016 ECHDC1Q9NTX5 307 aa10.55□□□□□ -0.72
USP6NL-203ENST00000443016 CEP290O15078 2479 aa10.55□□□□□ -0.72
USP6NL-203ENST00000443016 JAG1P78504 1218 aa10.55□□□□□ -0.72
USP6NL-203ENST00000443016 FAM110CQ1W6H9 321 aa10.55□□□□□ -0.72
USP6NL-203ENST00000443016 ABCB5Q2M3G0 1257 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms