RNA–Protein interactions for RNA: ENST00000434278.5

LMBR1-208, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 678 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-208ENST00000434278 PTCH2Q9Y6C5 1203 aa24.44■■□□□ 1.5
LMBR1-208ENST00000434278 HTTP42858 3142 aa24.44■■□□□ 1.5
LMBR1-208ENST00000434278 EVX2Q03828 476 aa24.43■■□□□ 1.5
LMBR1-208ENST00000434278 SH3D19Q5HYK7 790 aa24.43■■□□□ 1.5
LMBR1-208ENST00000434278 GINM1Q9NU53 330 aa24.43■■□□□ 1.5
LMBR1-208ENST00000434278 MBD4O95243 580 aa24.42■■□□□ 1.5
LMBR1-208ENST00000434278 PSMC4P43686 418 aa24.42■■□□□ 1.5
LMBR1-208ENST00000434278 UBE3CQ15386 1083 aa24.42■■□□□ 1.5
LMBR1-208ENST00000434278 TRIM47Q96LD4 638 aa24.42■■□□□ 1.5
LMBR1-208ENST00000434278 MCM9Q9NXL9 1143 aa24.42■■□□□ 1.5
LMBR1-208ENST00000434278 MYH7P12883 1935 aa24.41■■□□□ 1.5
LMBR1-208ENST00000434278 PRKAB2O43741 272 aa24.41■■□□□ 1.5
LMBR1-208ENST00000434278 POLR3DP05423 398 aaPredicted RBP24.41■■□□□ 1.5
LMBR1-208ENST00000434278 MTMR2Q13614 643 aa24.41■■□□□ 1.5
LMBR1-208ENST00000434278 ARMC5Q96C12 935 aa24.41■■□□□ 1.5
LMBR1-208ENST00000434278 DCP1AQ9NPI6 582 aaPredicted RBP24.41■■□□□ 1.5
LMBR1-208ENST00000434278 GNRH1P01148 92 aa24.4■■□□□ 1.5
LMBR1-208ENST00000434278 GH2P01242 217 aa24.4■■□□□ 1.5
LMBR1-208ENST00000434278 SHMT1P34896 483 aa24.4■■□□□ 1.5
LMBR1-208ENST00000434278 BACE1P56817 501 aa24.4■■□□□ 1.5
LMBR1-208ENST00000434278 GPATCH3Q96I76 525 aa24.4■■□□□ 1.5
LMBR1-208ENST00000434278 CYP2D6P10635 497 aa24.39■■□□□ 1.49
LMBR1-208ENST00000434278 GABPAQ06546 454 aa24.39■■□□□ 1.49
LMBR1-208ENST00000434278 OTUD7AQ8TE49 926 aaPredicted RBP24.39■■□□□ 1.49
LMBR1-208ENST00000434278 SMCR8Q8TEV9 937 aaPredicted RBP24.39■■□□□ 1.49
LMBR1-208ENST00000434278 FMNL1O95466 1100 aaPredicted RBP24.38■■□□□ 1.49
LMBR1-208ENST00000434278 OSBPP22059 807 aa24.38■■□□□ 1.49
LMBR1-208ENST00000434278 CERKLQ49MI3 558 aaPredicted RBP24.38■■□□□ 1.49
LMBR1-208ENST00000434278 ZSCAN25Q6NSZ9 544 aa24.38■■□□□ 1.49
LMBR1-208ENST00000434278 PUS7LQ9H0K6 701 aaKnown RBP24.38■■□□□ 1.49
LMBR1-208ENST00000434278 SRRDQ9UH36 339 aa24.38■■□□□ 1.49
LMBR1-208ENST00000434278 PNMA3Q9UL41 463 aa24.38■■□□□ 1.49
LMBR1-208ENST00000434278 C19orf81C9J6K1 198 aa24.37■■□□□ 1.49
LMBR1-208ENST00000434278 USP17L10C9JJH3 530 aa24.37■■□□□ 1.49
LMBR1-208ENST00000434278 PRMT2P55345 433 aa24.37■■□□□ 1.49
LMBR1-208ENST00000434278 KBTBD3Q8NAB2 608 aa24.37■■□□□ 1.49
LMBR1-208ENST00000434278 MGAMO43451 1857 aa24.36■■□□□ 1.49
LMBR1-208ENST00000434278 PABPC4Q13310 644 aaKnown RBP eCLIP24.36■■□□□ 1.49
LMBR1-208ENST00000434278 ABCB5Q2M3G0 1257 aa24.36■■□□□ 1.49
LMBR1-208ENST00000434278 SLC9C1Q4G0N8 1177 aa24.36■■□□□ 1.49
LMBR1-208ENST00000434278 ANKRD13CQ8N6S4 541 aa24.36■■□□□ 1.49
LMBR1-208ENST00000434278 ZNF333Q96JL9 665 aa24.36■■□□□ 1.49
LMBR1-208ENST00000434278 ASCC2Q9H1I8 757 aaPredicted RBP24.36■■□□□ 1.49
LMBR1-208ENST00000434278 ATP8A2Q9NTI2 1148 aa24.36■■□□□ 1.49
LMBR1-208ENST00000434278 TMOD4Q9NZQ9 345 aa24.36■■□□□ 1.49
LMBR1-208ENST00000434278 TTC41PQ6P2S7 1318 aa24.35■■□□□ 1.49
LMBR1-208ENST00000434278 FCGRTP55899 365 aa24.35■■□□□ 1.49
LMBR1-208ENST00000434278 PI4K2BQ8TCG2 481 aa24.35■■□□□ 1.49
LMBR1-208ENST00000434278 SH3TC2Q8TF17 1288 aa24.35■■□□□ 1.49
LMBR1-208ENST00000434278 EMILIN3Q9NT22 766 aa24.35■■□□□ 1.49
LMBR1-208ENST00000434278 BAZ2AQ9UIF9 1905 aaKnown RBP24.34■■□□□ 1.49
LMBR1-208ENST00000434278 POTEFA5A3E0 1075 aa24.34■■□□□ 1.49
LMBR1-208ENST00000434278 SMIM22K7EJ46 135 aa24.34■■□□□ 1.49
LMBR1-208ENST00000434278 HOXD10P28358 340 aa24.34■■□□□ 1.49
LMBR1-208ENST00000434278 GUCY1A2P33402 732 aa24.34■■□□□ 1.49
LMBR1-208ENST00000434278 HDAC1Q13547 482 aaPredicted RBP24.34■■□□□ 1.49
LMBR1-208ENST00000434278 RAB3GAP1Q15042 981 aa24.34■■□□□ 1.49
LMBR1-208ENST00000434278 SLC44A5Q8NCS7 719 aa24.34■■□□□ 1.49
LMBR1-208ENST00000434278 SLC4A4Q9Y6R1 1079 aa24.34■■□□□ 1.49
LMBR1-208ENST00000434278 MYPNQ86TC9 1320 aa24.34■■□□□ 1.49
LMBR1-208ENST00000434278 CENPFP49454 3210 aa24.33■■□□□ 1.49
LMBR1-208ENST00000434278 HOXA7P31268 230 aaPredicted RBP24.33■■□□□ 1.49
LMBR1-208ENST00000434278 NBPF11Q86T75 865 aa24.33■■□□□ 1.49
LMBR1-208ENST00000434278 DYNLL2Q96FJ2 89 aa24.33■■□□□ 1.49
LMBR1-208ENST00000434278 CABP5Q9NP86 173 aa24.33■■□□□ 1.49
LMBR1-208ENST00000434278 CYP2D7A0A087X1C5 515 aa24.32■■□□□ 1.48
LMBR1-208ENST00000434278 GCLCP48506 637 aaPredicted RBP24.32■■□□□ 1.48
LMBR1-208ENST00000434278 PRKCZQ05513 592 aa24.32■■□□□ 1.48
LMBR1-208ENST00000434278 FAM110CQ1W6H9 321 aa24.32■■□□□ 1.48
LMBR1-208ENST00000434278 ANKRD45Q5TZF3 282 aa24.32■■□□□ 1.48
LMBR1-208ENST00000434278 USP17L2Q6R6M4 530 aa24.32■■□□□ 1.48
LMBR1-208ENST00000434278 ACER1Q8TDN7 264 aa24.32■■□□□ 1.48
LMBR1-208ENST00000434278 STRBPQ96SI9 672 aaKnown RBP24.32■■□□□ 1.48
LMBR1-208ENST00000434278 GABRQQ9UN88 632 aa24.32■■□□□ 1.48
LMBR1-208ENST00000434278 SALL3Q9BXA9 1300 aa24.32■■□□□ 1.48
LMBR1-208ENST00000434278 RBBP6Q7Z6E9 1792 aaKnown RBP24.31■■□□□ 1.48
LMBR1-208ENST00000434278 USP17L12C9JPN9 530 aa24.31■■□□□ 1.48
LMBR1-208ENST00000434278 USP17L21D6R901 530 aa24.31■■□□□ 1.48
LMBR1-208ENST00000434278 RNF113AO15541 343 aaKnown RBP24.31■■□□□ 1.48
LMBR1-208ENST00000434278 MX1P20591 662 aa24.31■■□□□ 1.48
LMBR1-208ENST00000434278 SEPT2Q15019 361 aa24.31■■□□□ 1.48
LMBR1-208ENST00000434278 ZYXQ15942 572 aaKnown RBP24.31■■□□□ 1.48
LMBR1-208ENST00000434278 C12orf60Q5U649 245 aa24.31■■□□□ 1.48
LMBR1-208ENST00000434278 RAET1EQ8TD07 263 aa24.31■■□□□ 1.48
LMBR1-208ENST00000434278 APPBP2Q92624 585 aa24.31■■□□□ 1.48
LMBR1-208ENST00000434278 OSBP2Q969R2 916 aa24.31■■□□□ 1.48
LMBR1-208ENST00000434278 GCC1Q96CN9 775 aa24.31■■□□□ 1.48
LMBR1-208ENST00000434278 P2RX7Q99572 595 aaKnown RBP24.31■■□□□ 1.48
LMBR1-208ENST00000434278 ERC2O15083 957 aa24.3■■□□□ 1.48
LMBR1-208ENST00000434278 GLRX3O76003 335 aaKnown RBP24.3■■□□□ 1.48
LMBR1-208ENST00000434278 MYCP01106 439 aaPredicted RBP24.3■■□□□ 1.48
LMBR1-208ENST00000434278 IRX3P78415 501 aaPredicted RBP24.3■■□□□ 1.48
LMBR1-208ENST00000434278 C12orf42Q96LP6 360 aa24.3■■□□□ 1.48
LMBR1-208ENST00000434278 FEZ1Q99689 392 aa24.3■■□□□ 1.48
LMBR1-208ENST00000434278 SWAP70Q9UH65 585 aa24.3■■□□□ 1.48
LMBR1-208ENST00000434278 MPHOSPH10O00566 681 aaKnown RBP24.29■■□□□ 1.48
LMBR1-208ENST00000434278 TNPO2O14787 897 aaKnown RBP24.29■■□□□ 1.48
LMBR1-208ENST00000434278 CTR9Q6PD62 1173 aa24.29■■□□□ 1.48
LMBR1-208ENST00000434278 PEX10O60683 326 aa24.28■■□□□ 1.48
LMBR1-208ENST00000434278 ZFYP08048 801 aaPredicted RBP24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms