RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 LAMB1P07942 1786 aa29.97■■■□□ 2.39
CPNE1-212ENST00000430570 ATAD5Q96QE3 1844 aa29.97■■■□□ 2.39
CPNE1-212ENST00000430570 PPATQ06203 517 aa29.96■■■□□ 2.39
CPNE1-212ENST00000430570 DSCC1Q9BVC3 393 aa29.96■■■□□ 2.39
CPNE1-212ENST00000430570 GTF3C3Q9Y5Q9 886 aa29.96■■■□□ 2.39
CPNE1-212ENST00000430570 ROBO3Q96MS0 1386 aa29.96■■■□□ 2.39
CPNE1-212ENST00000430570 IRF6O14896 467 aa29.96■■■□□ 2.39
CPNE1-212ENST00000430570 JMYQ8N9B5 988 aa29.96■■■□□ 2.39
CPNE1-212ENST00000430570 ESYT1Q9BSJ8 1104 aa29.96■■■□□ 2.39
CPNE1-212ENST00000430570 ZHX2Q9Y6X8 837 aa29.96■■■□□ 2.39
CPNE1-212ENST00000430570 CEP350Q5VT06 3117 aa29.95■■■□□ 2.39
CPNE1-212ENST00000430570 THSD7BQ9C0I4 1608 aa29.95■■■□□ 2.39
CPNE1-212ENST00000430570 CDC45O75419 566 aa29.95■■■□□ 2.38
CPNE1-212ENST00000430570 GH2P01242 217 aa29.95■■■□□ 2.38
CPNE1-212ENST00000430570 PTH1RQ03431 593 aa29.95■■■□□ 2.38
CPNE1-212ENST00000430570 CTDSPL2Q05D32 466 aa29.95■■■□□ 2.38
CPNE1-212ENST00000430570 PPIL2Q13356 520 aa29.95■■■□□ 2.38
CPNE1-212ENST00000430570 TAOK2Q9UL54 1235 aa29.95■■■□□ 2.38
CPNE1-212ENST00000430570 ZBTB21Q9ULJ3 1066 aa29.95■■■□□ 2.38
CPNE1-212ENST00000430570 TACC3Q9Y6A5 838 aa29.95■■■□□ 2.38
CPNE1-212ENST00000430570 ZMYM6O95789 1325 aa29.94■■■□□ 2.38
CPNE1-212ENST00000430570 ABCB5Q2M3G0 1257 aa29.94■■■□□ 2.38
CPNE1-212ENST00000430570 MS4A4AQ96JQ5 239 aa29.94■■■□□ 2.38
CPNE1-212ENST00000430570 INCENPQ9NQS7 918 aa29.94■■■□□ 2.38
CPNE1-212ENST00000430570 ASNSP08243 561 aa29.93■■■□□ 2.38
CPNE1-212ENST00000430570 AKR1B1P15121 316 aa29.93■■■□□ 2.38
CPNE1-212ENST00000430570 GUCY1A2P33402 732 aa29.93■■■□□ 2.38
CPNE1-212ENST00000430570 ANAPC4Q9UJX5 808 aa29.93■■■□□ 2.38
CPNE1-212ENST00000430570 AFG3L2Q9Y4W6 797 aa29.93■■■□□ 2.38
CPNE1-212ENST00000430570 PHIPQ8WWQ0 1821 aa29.92■■■□□ 2.38
CPNE1-212ENST00000430570 PRDM1O75626 825 aa29.92■■■□□ 2.38
CPNE1-212ENST00000430570 HAND2P61296 217 aa29.92■■■□□ 2.38
CPNE1-212ENST00000430570 GINM1Q9NU53 330 aa29.92■■■□□ 2.38
CPNE1-212ENST00000430570 USP17L5A8MUK1 530 aa29.91■■■□□ 2.38
CPNE1-212ENST00000430570 RASA1P20936 1047 aa29.91■■■□□ 2.38
CPNE1-212ENST00000430570 MKNK2Q9HBH9 465 aa29.91■■■□□ 2.38
CPNE1-212ENST00000430570 KCNH4Q9UQ05 1017 aa29.91■■■□□ 2.38
CPNE1-212ENST00000430570 MYH8P13535 1937 aa29.9■■■□□ 2.38
CPNE1-212ENST00000430570 MANSC4A6NHS7 340 aaPredicted RBP29.9■■■□□ 2.38
CPNE1-212ENST00000430570 MPHOSPH10O00566 681 aaKnown RBP29.9■■■□□ 2.38
CPNE1-212ENST00000430570 NBPF3Q9H094 633 aa29.9■■■□□ 2.38
CPNE1-212ENST00000430570 CABP5Q9NP86 173 aa29.9■■■□□ 2.38
CPNE1-212ENST00000430570 SLC3A2P08195 630 aaKnown RBP29.89■■■□□ 2.38
CPNE1-212ENST00000430570 TM4SF4P48230 202 aa29.89■■■□□ 2.38
CPNE1-212ENST00000430570 SEPT2Q15019 361 aa29.89■■■□□ 2.38
CPNE1-212ENST00000430570 DDX52Q9Y2R4 599 aaKnown RBP eCLIP29.89■■■□□ 2.38
CPNE1-212ENST00000430570 GTF2A2P52657 109 aa29.88■■■□□ 2.37
CPNE1-212ENST00000430570 SPP2Q13103 211 aa29.88■■■□□ 2.37
CPNE1-212ENST00000430570 RAB3GAP1Q15042 981 aa29.88■■■□□ 2.37
CPNE1-212ENST00000430570 CCDC17Q96LX7 622 aa29.88■■■□□ 2.37
CPNE1-212ENST00000430570 LSG1Q9H089 658 aaKnown RBP29.88■■■□□ 2.37
CPNE1-212ENST00000430570 TESPA1A2RU30 521 aaPredicted RBP29.87■■■□□ 2.37
CPNE1-212ENST00000430570 TRIM75PA6NK02 468 aa29.87■■■□□ 2.37
CPNE1-212ENST00000430570 CXCL11O14625 94 aa29.87■■■□□ 2.37
CPNE1-212ENST00000430570 PDE4BQ07343 736 aa29.87■■■□□ 2.37
CPNE1-212ENST00000430570 SNAPC2Q13487 334 aa29.87■■■□□ 2.37
CPNE1-212ENST00000430570 CASC1Q6TDU7 716 aa29.87■■■□□ 2.37
CPNE1-212ENST00000430570 ZNF280CQ8ND82 737 aa29.87■■■□□ 2.37
CPNE1-212ENST00000430570 BRI3BPQ8WY22 251 aa29.87■■■□□ 2.37
CPNE1-212ENST00000430570 PTPN18Q99952 460 aa29.87■■■□□ 2.37
CPNE1-212ENST00000430570 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.87■■■□□ 2.37
CPNE1-212ENST00000430570 CCL15-CCL14A0A0B4J2E2 113 aa29.86■■■□□ 2.37
CPNE1-212ENST00000430570 ZNF213O14771 459 aa29.86■■■□□ 2.37
CPNE1-212ENST00000430570 CCL15Q16663 113 aa29.86■■■□□ 2.37
CPNE1-212ENST00000430570 TBC1D10CQ8IV04 446 aa29.86■■■□□ 2.37
CPNE1-212ENST00000430570 ZNF444Q8N0Y2 327 aaPredicted RBP29.86■■■□□ 2.37
CPNE1-212ENST00000430570 MAP4K1Q92918 833 aa29.86■■■□□ 2.37
CPNE1-212ENST00000430570 WDR18Q9BV38 432 aa29.86■■■□□ 2.37
CPNE1-212ENST00000430570 AS3MTQ9HBK9 375 aa29.86■■■□□ 2.37
CPNE1-212ENST00000430570 WBP1LQ9NX94 342 aa29.86■■■□□ 2.37
CPNE1-212ENST00000430570 CTNNA3Q9UI47 895 aa29.86■■■□□ 2.37
CPNE1-212ENST00000430570 FGRP09769 529 aa29.85■■■□□ 2.37
CPNE1-212ENST00000430570 MAP2K1Q02750 393 aaPredicted RBP29.85■■■□□ 2.37
CPNE1-212ENST00000430570 SREBF2Q12772 1141 aa29.85■■■□□ 2.37
CPNE1-212ENST00000430570 MOGSQ13724 837 aa29.85■■■□□ 2.37
CPNE1-212ENST00000430570 TMEM179Q6ZVK1 233 aa29.85■■■□□ 2.37
CPNE1-212ENST00000430570 CLEC10AQ8IUN9 316 aa29.85■■■□□ 2.37
CPNE1-212ENST00000430570 REM2Q8IYK8 340 aaPredicted RBP29.85■■■□□ 2.37
CPNE1-212ENST00000430570 ZNF287Q9HBT7 754 aa29.85■■■□□ 2.37
CPNE1-212ENST00000430570 IGF2BP3O00425 579 aaKnown RBP eCLIP29.84■■■□□ 2.37
CPNE1-212ENST00000430570 INHBEP58166 350 aa29.84■■■□□ 2.37
CPNE1-212ENST00000430570 FAM47AQ5JRC9 791 aa29.84■■■□□ 2.37
CPNE1-212ENST00000430570 KIAA1211Q6ZU35 1233 aa29.84■■■□□ 2.37
CPNE1-212ENST00000430570 TBC1D2Q9BYX2 928 aa29.84■■■□□ 2.37
CPNE1-212ENST00000430570 A0A0G2JLL6 359 aaPredicted RBP29.83■■■□□ 2.37
CPNE1-212ENST00000430570 CETPP11597 493 aa29.83■■■□□ 2.37
CPNE1-212ENST00000430570 DGKZQ13574 1117 aa29.83■■■□□ 2.37
CPNE1-212ENST00000430570 PRRT2Q7Z6L0 340 aaPredicted RBP29.83■■■□□ 2.37
CPNE1-212ENST00000430570 IFNL1Q8IU54 200 aa29.83■■■□□ 2.37
CPNE1-212ENST00000430570 SIAH1Q8IUQ4 282 aa29.83■■■□□ 2.37
CPNE1-212ENST00000430570 NKX2-3Q8TAU0 364 aa29.83■■■□□ 2.37
CPNE1-212ENST00000430570 ACER1Q8TDN7 264 aa29.83■■■□□ 2.37
CPNE1-212ENST00000430570 ANO2Q9NQ90 1003 aa29.83■■■□□ 2.37
CPNE1-212ENST00000430570 U3KPZ7 1027 aaPredicted RBP29.83■■■□□ 2.37
CPNE1-212ENST00000430570 IMMTQ16891 758 aaKnown RBP29.82■■■□□ 2.36
CPNE1-212ENST00000430570 AKNAD1Q5T1N1 836 aa29.82■■■□□ 2.36
CPNE1-212ENST00000430570 STAG1Q8WVM7 1258 aa29.82■■■□□ 2.36
CPNE1-212ENST00000430570 RBM8AQ9Y5S9 174 aaKnown RBP29.82■■■□□ 2.36
CPNE1-212ENST00000430570 LAMA4Q16363 1823 aa29.82■■■□□ 2.36
CPNE1-212ENST00000430570 PTPRFP10586 1907 aa29.81■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms