RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 GPAA1O43292 621 aa26.82■■□□□ 1.88
PTCHD3P2-201ENST00000424937 FKTNO75072 461 aa26.82■■□□□ 1.88
PTCHD3P2-201ENST00000424937 JAG1P78504 1218 aa26.82■■□□□ 1.88
PTCHD3P2-201ENST00000424937 PLEKHM2Q8IWE5 1019 aa26.82■■□□□ 1.88
PTCHD3P2-201ENST00000424937 AMOTL1Q8IY63 956 aa26.82■■□□□ 1.88
PTCHD3P2-201ENST00000424937 TBC1D2Q9BYX2 928 aa26.82■■□□□ 1.88
PTCHD3P2-201ENST00000424937 AS3MTQ9HBK9 375 aa26.82■■□□□ 1.88
PTCHD3P2-201ENST00000424937 PDHXO00330 501 aa26.81■■□□□ 1.88
PTCHD3P2-201ENST00000424937 SHMT1P34896 483 aa26.81■■□□□ 1.88
PTCHD3P2-201ENST00000424937 SPP2Q13103 211 aa26.81■■□□□ 1.88
PTCHD3P2-201ENST00000424937 DGKZQ13574 1117 aa26.81■■□□□ 1.88
PTCHD3P2-201ENST00000424937 TATDN1Q6P1N9 297 aa26.81■■□□□ 1.88
PTCHD3P2-201ENST00000424937 FASTKD5Q7L8L6 764 aaKnown RBP26.81■■□□□ 1.88
PTCHD3P2-201ENST00000424937 ZNF280CQ8ND82 737 aa26.81■■□□□ 1.88
PTCHD3P2-201ENST00000424937 GINM1Q9NU53 330 aa26.81■■□□□ 1.88
PTCHD3P2-201ENST00000424937 GABPAQ06546 454 aa26.8■■□□□ 1.88
PTCHD3P2-201ENST00000424937 CERKLQ49MI3 558 aaPredicted RBP26.8■■□□□ 1.88
PTCHD3P2-201ENST00000424937 CYP2D7A0A087X1C5 515 aa26.79■■□□□ 1.88
PTCHD3P2-201ENST00000424937 GH2P01242 217 aa26.79■■□□□ 1.88
PTCHD3P2-201ENST00000424937 ZMYM1Q5SVZ6 1142 aa26.79■■□□□ 1.88
PTCHD3P2-201ENST00000424937 SEC62Q99442 399 aaKnown RBP26.79■■□□□ 1.88
PTCHD3P2-201ENST00000424937 ZSWIM8A7E2V4 1837 aa26.79■■□□□ 1.88
PTCHD3P2-201ENST00000424937 TRIM6-TRIM34B2RNG4 842 aa26.78■■□□□ 1.88
PTCHD3P2-201ENST00000424937 USP17L12C9JPN9 530 aa26.78■■□□□ 1.88
PTCHD3P2-201ENST00000424937 USP17L21D6R901 530 aa26.78■■□□□ 1.88
PTCHD3P2-201ENST00000424937 GNAT2P19087 354 aa26.78■■□□□ 1.88
PTCHD3P2-201ENST00000424937 GPAT2Q6NUI2 795 aa26.78■■□□□ 1.88
PTCHD3P2-201ENST00000424937 CTU1Q7Z7A3 348 aaKnown RBP26.78■■□□□ 1.88
PTCHD3P2-201ENST00000424937 SLC44A5Q8NCS7 719 aa26.78■■□□□ 1.88
PTCHD3P2-201ENST00000424937 DYNLL2Q96FJ2 89 aa26.78■■□□□ 1.88
PTCHD3P2-201ENST00000424937 MCOLN1Q9GZU1 580 aa26.78■■□□□ 1.88
PTCHD3P2-201ENST00000424937 OSBPL3Q9H4L5 887 aa26.78■■□□□ 1.88
PTCHD3P2-201ENST00000424937 ARPP21Q9UBL0 812 aaPredicted RBP26.78■■□□□ 1.88
PTCHD3P2-201ENST00000424937 GSG1L2A8MUP6 293 aa26.77■■□□□ 1.88
PTCHD3P2-201ENST00000424937 HMGCS2P54868 508 aa26.77■■□□□ 1.88
PTCHD3P2-201ENST00000424937 ABCB5Q2M3G0 1257 aa26.77■■□□□ 1.88
PTCHD3P2-201ENST00000424937 C12orf60Q5U649 245 aa26.77■■□□□ 1.88
PTCHD3P2-201ENST00000424937 WDR18Q9BV38 432 aa26.77■■□□□ 1.88
PTCHD3P2-201ENST00000424937 SWAP70Q9UH65 585 aa26.77■■□□□ 1.88
PTCHD3P2-201ENST00000424937 SMIM22K7EJ46 135 aa26.76■■□□□ 1.87
PTCHD3P2-201ENST00000424937 TLR2O60603 784 aa26.76■■□□□ 1.87
PTCHD3P2-201ENST00000424937 MTMR2Q13614 643 aa26.76■■□□□ 1.87
PTCHD3P2-201ENST00000424937 CTR9Q6PD62 1173 aa26.76■■□□□ 1.87
PTCHD3P2-201ENST00000424937 RILPL2Q969X0 211 aa26.76■■□□□ 1.87
PTCHD3P2-201ENST00000424937 PARK7Q99497 189 aaKnown RBP26.76■■□□□ 1.87
PTCHD3P2-201ENST00000424937 EPB41L4AQ9HCS5 686 aaPredicted RBP26.76■■□□□ 1.87
PTCHD3P2-201ENST00000424937 SP3Q02447 781 aa26.75■■□□□ 1.87
PTCHD3P2-201ENST00000424937 RAB3GAP1Q15042 981 aa26.75■■□□□ 1.87
PTCHD3P2-201ENST00000424937 PROCA1Q8NCQ7 364 aaPredicted RBP26.75■■□□□ 1.87
PTCHD3P2-201ENST00000424937 CABP5Q9NP86 173 aa26.75■■□□□ 1.87
PTCHD3P2-201ENST00000424937 AGTPBP1Q9UPW5 1226 aa26.75■■□□□ 1.87
PTCHD3P2-201ENST00000424937 APPP05067 770 aa26.74■■□□□ 1.87
PTCHD3P2-201ENST00000424937 TDO2P48775 406 aa26.74■■□□□ 1.87
PTCHD3P2-201ENST00000424937 TREML2Q5T2D2 321 aa26.74■■□□□ 1.87
PTCHD3P2-201ENST00000424937 GIMAP6Q6P9H5 292 aa26.74■■□□□ 1.87
PTCHD3P2-201ENST00000424937 CCDC129Q6ZRS4 1044 aa26.74■■□□□ 1.87
PTCHD3P2-201ENST00000424937 CD99L2Q8TCZ2 262 aa26.74■■□□□ 1.87
PTCHD3P2-201ENST00000424937 ERO1AQ96HE7 468 aa26.74■■□□□ 1.87
PTCHD3P2-201ENST00000424937 MGAMO43451 1857 aa26.73■■□□□ 1.87
PTCHD3P2-201ENST00000424937 MPHOSPH10O00566 681 aaKnown RBP26.73■■□□□ 1.87
PTCHD3P2-201ENST00000424937 CYP2C8P10632 490 aa26.73■■□□□ 1.87
PTCHD3P2-201ENST00000424937 PDE4AP27815 886 aa26.73■■□□□ 1.87
PTCHD3P2-201ENST00000424937 BACE1P56817 501 aa26.73■■□□□ 1.87
PTCHD3P2-201ENST00000424937 IFFO2Q5TF58 517 aa26.73■■□□□ 1.87
PTCHD3P2-201ENST00000424937 TAOK2Q9UL54 1235 aa26.73■■□□□ 1.87
PTCHD3P2-201ENST00000424937 SLC45A1Q9Y2W3 748 aa26.73■■□□□ 1.87
PTCHD3P2-201ENST00000424937 ADGRA2Q96PE1 1338 aa26.72■■□□□ 1.87
PTCHD3P2-201ENST00000424937 USP17L10C9JJH3 530 aa26.72■■□□□ 1.87
PTCHD3P2-201ENST00000424937 SH3D19Q5HYK7 790 aa26.72■■□□□ 1.87
PTCHD3P2-201ENST00000424937 C16orf86Q6ZW13 317 aa26.72■■□□□ 1.87
PTCHD3P2-201ENST00000424937 ABHD8Q96I13 439 aa26.72■■□□□ 1.87
PTCHD3P2-201ENST00000424937 FEZ1Q99689 392 aa26.72■■□□□ 1.87
PTCHD3P2-201ENST00000424937 CPA4Q9UI42 421 aa26.72■■□□□ 1.87
PTCHD3P2-201ENST00000424937 MINDY4BA8MYZ0 360 aa26.71■■□□□ 1.87
PTCHD3P2-201ENST00000424937 PATL2C9JE40 543 aaKnown RBP26.71■■□□□ 1.87
PTCHD3P2-201ENST00000424937 CDK8P49336 464 aa26.71■■□□□ 1.87
PTCHD3P2-201ENST00000424937 SBK1Q52WX2 424 aa26.71■■□□□ 1.87
PTCHD3P2-201ENST00000424937 IFNL3Q8IZI9 196 aa26.71■■□□□ 1.87
PTCHD3P2-201ENST00000424937 TMOD4Q9NZQ9 345 aa26.71■■□□□ 1.87
PTCHD3P2-201ENST00000424937 GREB1LQ9C091 1923 aaPredicted RBP26.71■■□□□ 1.87
PTCHD3P2-201ENST00000424937 A0A0D9SFI3 127 aa26.7■■□□□ 1.86
PTCHD3P2-201ENST00000424937 CAPN15O75808 1086 aa26.7■■□□□ 1.86
PTCHD3P2-201ENST00000424937 GUCY1A2P33402 732 aa26.7■■□□□ 1.86
PTCHD3P2-201ENST00000424937 SEPT2Q15019 361 aa26.7■■□□□ 1.86
PTCHD3P2-201ENST00000424937 STK11IPQ8N1F8 1099 aa26.7■■□□□ 1.86
PTCHD3P2-201ENST00000424937 FAM227BQ96M60 508 aa26.7■■□□□ 1.86
PTCHD3P2-201ENST00000424937 NACAP1Q9BZK3 213 aa26.7■■□□□ 1.86
PTCHD3P2-201ENST00000424937 HELLSQ9NRZ9 838 aa26.7■■□□□ 1.86
PTCHD3P2-201ENST00000424937 ROBO3Q96MS0 1386 aa26.7■■□□□ 1.86
PTCHD3P2-201ENST00000424937 C19orf81C9J6K1 198 aa26.69■■□□□ 1.86
PTCHD3P2-201ENST00000424937 AKR1B1P15121 316 aa26.69■■□□□ 1.86
PTCHD3P2-201ENST00000424937 NMIQ13287 307 aaPredicted RBP26.69■■□□□ 1.86
PTCHD3P2-201ENST00000424937 ZYXQ15942 572 aaKnown RBP26.69■■□□□ 1.86
PTCHD3P2-201ENST00000424937 C17orf99Q6UX52 265 aa26.69■■□□□ 1.86
PTCHD3P2-201ENST00000424937 SMCR8Q8TEV9 937 aaPredicted RBP26.69■■□□□ 1.86
PTCHD3P2-201ENST00000424937 NAPBQ9H115 298 aa26.69■■□□□ 1.86
PTCHD3P2-201ENST00000424937 PNMA3Q9UL41 463 aa26.69■■□□□ 1.86
PTCHD3P2-201ENST00000424937 TRIM17Q9Y577 477 aa26.69■■□□□ 1.86
PTCHD3P2-201ENST00000424937 PABPC4Q13310 644 aaKnown RBP eCLIP26.68■■□□□ 1.86
PTCHD3P2-201ENST00000424937 TMEM179Q6ZVK1 233 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms