RNA–Protein interactions for RNA: ENST00000423723.1

NCDN-204, Transcript of neurochondrin, humanhuman

TSL 3

Gene NCDN, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-204ENST00000423723 GNRH1P01148 92 aa13.95□□□□□ -0.18
NCDN-204ENST00000423723 USP5P45974 858 aa13.95□□□□□ -0.18
NCDN-204ENST00000423723 SPP2Q13103 211 aa13.95□□□□□ -0.18
NCDN-204ENST00000423723 ARHGEF6Q15052 776 aa13.95□□□□□ -0.18
NCDN-204ENST00000423723 CD99L2Q8TCZ2 262 aa13.95□□□□□ -0.18
NCDN-204ENST00000423723 GPATCH3Q96I76 525 aa13.95□□□□□ -0.18
NCDN-204ENST00000423723 AGTPBP1Q9UPW5 1226 aa13.95□□□□□ -0.18
NCDN-204ENST00000423723 PTPN22Q9Y2R2 807 aa13.95□□□□□ -0.18
NCDN-204ENST00000423723 PTPRFP10586 1907 aa13.95□□□□□ -0.18
NCDN-204ENST00000423723 C19orf81C9J6K1 198 aa13.94□□□□□ -0.18
NCDN-204ENST00000423723 GLRX3O76003 335 aaKnown RBP13.94□□□□□ -0.18
NCDN-204ENST00000423723 ZFYP08048 801 aaPredicted RBP13.94□□□□□ -0.18
NCDN-204ENST00000423723 HOXA7P31268 230 aaPredicted RBP13.94□□□□□ -0.18
NCDN-204ENST00000423723 SHMT1P34896 483 aa13.94□□□□□ -0.18
NCDN-204ENST00000423723 BACE1P56817 501 aa13.94□□□□□ -0.18
NCDN-204ENST00000423723 LACTBP83111 547 aaPredicted RBP13.94□□□□□ -0.18
NCDN-204ENST00000423723 SLFNL1Q499Z3 407 aa13.94□□□□□ -0.18
NCDN-204ENST00000423723 PUS7LQ9H0K6 701 aaKnown RBP13.94□□□□□ -0.18
NCDN-204ENST00000423723 EFCC1Q9HA90 598 aa13.94□□□□□ -0.18
NCDN-204ENST00000423723 AS3MTQ9HBK9 375 aa13.94□□□□□ -0.18
NCDN-204ENST00000423723 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.94□□□□□ -0.18
NCDN-204ENST00000423723 DAXXQ9UER7 740 aaPredicted RBP13.94□□□□□ -0.18
NCDN-204ENST00000423723 SAP30BPQ9UHR5 308 aaKnown RBP13.94□□□□□ -0.18
NCDN-204ENST00000423723 ZBTB21Q9ULJ3 1066 aa13.94□□□□□ -0.18
NCDN-204ENST00000423723 TRIM17Q9Y577 477 aa13.94□□□□□ -0.18
NCDN-204ENST00000423723 TRIM75PA6NK02 468 aa13.93□□□□□ -0.18
NCDN-204ENST00000423723 ERC2O15083 957 aa13.93□□□□□ -0.18
NCDN-204ENST00000423723 CHGBP05060 677 aa13.93□□□□□ -0.18
NCDN-204ENST00000423723 NUCB1Q02818 461 aa13.93□□□□□ -0.18
NCDN-204ENST00000423723 GIMAP6Q6P9H5 292 aa13.93□□□□□ -0.18
NCDN-204ENST00000423723 CCDC84Q86UT8 332 aaPredicted RBP13.93□□□□□ -0.18
NCDN-204ENST00000423723 OTUD7AQ8TE49 926 aaPredicted RBP13.93□□□□□ -0.18
NCDN-204ENST00000423723 STRBPQ96SI9 672 aaKnown RBP13.93□□□□□ -0.18
NCDN-204ENST00000423723 PARK7Q99497 189 aaKnown RBP13.93□□□□□ -0.18
NCDN-204ENST00000423723 ARMT1Q9H993 441 aa13.93□□□□□ -0.18
NCDN-204ENST00000423723 UPF2Q9HAU5 1272 aaKnown RBP13.93□□□□□ -0.18
NCDN-204ENST00000423723 DDX60LQ5H9U9 1706 aaKnown RBP13.93□□□□□ -0.18
NCDN-204ENST00000423723 MYH1P12882 1939 aa13.92□□□□□ -0.18
NCDN-204ENST00000423723 PRKAB2O43741 272 aa13.92□□□□□ -0.18
NCDN-204ENST00000423723 CTGFP29279 349 aa13.92□□□□□ -0.18
NCDN-204ENST00000423723 GUCY1A2P33402 732 aa13.92□□□□□ -0.18
NCDN-204ENST00000423723 PRMT2P55345 433 aa13.92□□□□□ -0.18
NCDN-204ENST00000423723 C12orf60Q5U649 245 aa13.92□□□□□ -0.18
NCDN-204ENST00000423723 CRACR2BQ8N4Y2 399 aaPredicted RBP13.92□□□□□ -0.18
NCDN-204ENST00000423723 SDR42E1Q8WUS8 393 aa13.92□□□□□ -0.18
NCDN-204ENST00000423723 OSBP2Q969R2 916 aa13.92□□□□□ -0.18
NCDN-204ENST00000423723 ARMC5Q96C12 935 aa13.92□□□□□ -0.18
NCDN-204ENST00000423723 C12orf42Q96LP6 360 aa13.92□□□□□ -0.18
NCDN-204ENST00000423723 MCM9Q9NXL9 1143 aa13.92□□□□□ -0.18
NCDN-204ENST00000423723 BRCA2P51587 3418 aa13.92□□□□□ -0.18
NCDN-204ENST00000423723 CCDC85CA6NKD9 419 aa13.91□□□□□ -0.18
NCDN-204ENST00000423723 USP17L10C9JJH3 530 aa13.91□□□□□ -0.18
NCDN-204ENST00000423723 RNF113AO15541 343 aaKnown RBP13.91□□□□□ -0.18
NCDN-204ENST00000423723 MBD4O95243 580 aa13.91□□□□□ -0.18
NCDN-204ENST00000423723 CYP2C8P10632 490 aa13.91□□□□□ -0.18
NCDN-204ENST00000423723 MX1P20591 662 aa13.91□□□□□ -0.18
NCDN-204ENST00000423723 SHROOM1Q2M3G4 852 aaPredicted RBP13.91□□□□□ -0.18
NCDN-204ENST00000423723 CERKLQ49MI3 558 aaPredicted RBP13.91□□□□□ -0.18
NCDN-204ENST00000423723 SBK1Q52WX2 424 aa13.91□□□□□ -0.18
NCDN-204ENST00000423723 TREML2Q5T2D2 321 aa13.91□□□□□ -0.18
NCDN-204ENST00000423723 ANKRD45Q5TZF3 282 aa13.91□□□□□ -0.18
NCDN-204ENST00000423723 TSHZ3Q63HK5 1081 aa13.91□□□□□ -0.18
NCDN-204ENST00000423723 APPBP2Q92624 585 aa13.91□□□□□ -0.18
NCDN-204ENST00000423723 SWAP70Q9UH65 585 aa13.91□□□□□ -0.18
NCDN-204ENST00000423723 CPA4Q9UI42 421 aa13.91□□□□□ -0.18
NCDN-204ENST00000423723 GSG1L2A8MUP6 293 aa13.9□□□□□ -0.18
NCDN-204ENST00000423723 GDF11O95390 407 aa13.9□□□□□ -0.18
NCDN-204ENST00000423723 GH2P01242 217 aa13.9□□□□□ -0.18
NCDN-204ENST00000423723 POLR3DP05423 398 aaPredicted RBP13.9□□□□□ -0.18
NCDN-204ENST00000423723 PDE1AP54750 535 aa13.9□□□□□ -0.18
NCDN-204ENST00000423723 HMGCS2P54868 508 aa13.9□□□□□ -0.18
NCDN-204ENST00000423723 EVX2Q03828 476 aa13.9□□□□□ -0.18
NCDN-204ENST00000423723 GADL1Q6ZQY3 521 aa13.9□□□□□ -0.18
NCDN-204ENST00000423723 KIAA1683Q9H0B3 1180 aa13.9□□□□□ -0.18
NCDN-204ENST00000423723 OSBPL3Q9H4L5 887 aa13.9□□□□□ -0.18
NCDN-204ENST00000423723 EMILIN3Q9NT22 766 aa13.9□□□□□ -0.18
NCDN-204ENST00000423723 KIAA0100Q14667 2235 aaKnown RBP13.9□□□□□ -0.18
NCDN-204ENST00000423723 USP17L12C9JPN9 530 aa13.89□□□□□ -0.19
NCDN-204ENST00000423723 USP17L21D6R901 530 aa13.89□□□□□ -0.19
NCDN-204ENST00000423723 GCLCP48506 637 aaPredicted RBP13.89□□□□□ -0.19
NCDN-204ENST00000423723 PABPC4Q13310 644 aaKnown RBP eCLIP13.89□□□□□ -0.192e-11■■■□□ 19
NCDN-204ENST00000423723 BECN1Q14457 450 aa13.89□□□□□ -0.19
NCDN-204ENST00000423723 ABCB5Q2M3G0 1257 aa13.89□□□□□ -0.19
NCDN-204ENST00000423723 LRRFIP1Q32MZ4 808 aaKnown RBP13.89□□□□□ -0.19
NCDN-204ENST00000423723 CTR9Q6PD62 1173 aa13.89□□□□□ -0.19
NCDN-204ENST00000423723 CHD1LQ86WJ1 897 aa13.89□□□□□ -0.19
NCDN-204ENST00000423723 SIAH1Q8IUQ4 282 aa13.89□□□□□ -0.19
NCDN-204ENST00000423723 TRIM47Q96LD4 638 aa13.89□□□□□ -0.19
NCDN-204ENST00000423723 CCDC17Q96LX7 622 aa13.89□□□□□ -0.19
NCDN-204ENST00000423723 TBC1D32Q96NH3 1257 aa13.89□□□□□ -0.19
NCDN-204ENST00000423723 TRIM34Q9BYJ4 488 aa13.89□□□□□ -0.19
NCDN-204ENST00000423723 ARHGAP39Q9C0H5 1083 aa13.89□□□□□ -0.19
NCDN-204ENST00000423723 PNMA3Q9UL41 463 aa13.89□□□□□ -0.19
NCDN-204ENST00000423723 MKI67P46013 3256 aaKnown RBP13.89□□□□□ -0.19
NCDN-204ENST00000423723 LOC285556D6RIA3 1793 aa13.88□□□□□ -0.19
NCDN-204ENST00000423723 SEC24BO95487 1268 aa13.88□□□□□ -0.19
NCDN-204ENST00000423723 GNAT2P19087 354 aa13.88□□□□□ -0.19
NCDN-204ENST00000423723 PSMC4P43686 418 aa13.88□□□□□ -0.19
NCDN-204ENST00000423723 MTMR2Q13614 643 aa13.88□□□□□ -0.19
NCDN-204ENST00000423723 KIF22Q14807 665 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms